Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 4.2e-107 391.3 196 100.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.2e-96 356.7 194 92.3
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.8e-94 349.4 194 91.2
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 9.8e-80 300.4 197 79.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 5.8e-64 248.1 198 71.2
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.9e-54 216.5 200 60.0
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.2e-53 213.8 195 59.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.1e-53 213.0 183 62.8
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.1e-53 213.0 183 62.8
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 6.0e-53 211.5 199 58.8
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 6.0e-53 211.5 203 58.1
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.3e-52 210.3 195 56.9
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.7e-52 209.9 160 67.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 3.9e-52 208.8 202 56.4
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 3.9e-52 208.8 197 60.4
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 6.6e-52 208.0 201 60.7
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.1e-51 207.2 202 56.9
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 5.6e-51 204.9 181 60.8
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 9.6e-51 204.1 197 58.9
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.6e-50 203.4 200 57.5
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.6e-50 203.4 174 64.4
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 2.8e-50 202.6 174 63.8
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.8e-50 202.6 199 58.8
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 3.6e-50 202.2 198 57.1
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 4.7e-50 201.8 142 73.2
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 8.1e-50 201.1 174 63.8
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 8.1e-50 201.1 130 75.4
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.1e-49 200.7 171 63.7
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.8e-49 199.9 177 64.4
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 1.8e-49 199.9 201 56.7
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.8e-49 199.9 186 61.3
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 3.1e-49 199.1 154 65.6
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.1e-49 199.1 199 55.8
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 3.1e-49 199.1 170 62.9
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 9.0e-49 197.6 178 59.6
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.2e-48 197.2 122 79.5
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 4.4e-48 195.3 159 61.6
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 7.6e-48 194.5 168 64.3
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.3e-47 193.7 178 59.6
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.3e-47 193.7 179 61.5
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.7e-47 193.4 131 74.0
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.2e-47 193.0 177 59.9
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.2e-47 193.0 161 65.8
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 4.9e-47 191.8 165 65.5
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 6.4e-47 191.4 145 69.7
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.9e-46 189.9 145 68.3
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 7.8e-45 184.5 161 60.2
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 2.3e-44 183.0 201 52.7
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.3e-44 183.0 145 62.8
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 2.3e-44 183.0 127 69.3
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 3.0e-44 182.6 141 66.7
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 6.6e-44 181.4 188 56.4
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 6.6e-44 181.4 122 72.1
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 8.7e-44 181.0 202 50.5
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.1e-43 180.6 132 68.9
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.1e-43 180.6 134 67.2
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 4.3e-43 178.7 147 61.9
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.6e-42 176.8 196 51.5
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.6e-42 176.8 183 56.3
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.1e-42 176.4 193 52.3
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.8e-42 176.0 184 52.7
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 2.8e-42 176.0 164 57.9
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.6e-42 175.6 114 76.3
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.8e-41 173.3 114 74.6
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 5.3e-41 171.8 147 61.2
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 6.9e-41 171.4 138 65.9
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 9.0e-41 171.0 125 69.6
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.5e-40 170.2 123 69.1
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.5e-40 170.2 123 69.1
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.6e-40 169.5 132 68.9
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 4.5e-40 168.7 138 65.2
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 5.8e-40 168.3 125 68.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 5.8e-40 168.3 125 68.0
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 5.8e-40 168.3 166 58.4
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 9.9e-40 167.5 125 68.0
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.7e-39 166.8 173 53.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 6.4e-39 164.9 123 67.5
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.4e-38 163.7 122 67.2
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 2.4e-38 162.9 136 65.4
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 5.4e-38 161.8 151 57.0
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 9.3e-38 161.0 123 66.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 2.3e-36 156.4 184 52.2
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.3e-36 156.4 123 66.7
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.9e-35 153.3 172 53.5
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.6e-34 150.2 136 61.0
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.8e-34 149.4 185 50.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.8e-34 149.4 185 50.3
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.8e-34 149.4 197 45.7
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 8.1e-34 147.9 126 62.7
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.1e-33 146.0 151 53.0
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 6.9e-33 144.8 128 62.5
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 7.9e-29 131.3 183 41.0
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 3.9e-28 129.0 163 48.5
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 2.1e-26 123.2 161 43.5
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 2.8e-26 122.9 134 50.0
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 2.4e-25 119.8 129 47.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.2e-24 117.5 326 31.0
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 3.2e-22 109.4 82 63.4
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.2e-22 109.0 89 61.8
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 9.3e-22 107.8 82 63.4
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.2e-21 107.5 89 60.7
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 2.0e-16 90.1 80 53.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.5e-11 73.9 49 71.4
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 4.8e-10 68.9 87 47.1
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 8.2e-10 68.2 52 65.4
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 7.2e-06 55.1 94 45.7


User provided reference genes

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