Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 9.1e-37 156.4 78 100.0
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 4.2e-34 147.5 78 93.6
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 4.7e-33 144.1 78 91.0
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 4.2e-26 120.9 78 75.6
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 9.4e-26 119.8 78 75.6
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 1.5e-23 112.5 78 73.1
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 2.0e-23 112.1 81 70.4
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 3.4e-23 111.3 78 69.2
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 9.8e-23 109.8 74 70.3
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 2.2e-22 108.6 74 68.9
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 3.7e-22 107.8 78 67.9
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 3.7e-22 107.8 78 67.9
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 1.1e-21 106.3 78 69.2
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 1.8e-21 105.5 78 65.4
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 1.8e-21 105.5 78 67.9
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 3.1e-21 104.8 75 69.3
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 3.1e-21 104.8 74 64.9
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 4.1e-21 104.4 78 65.4
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 4.1e-21 104.4 72 68.1
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 5.4e-21 104.0 78 66.7
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 5.4e-21 104.0 76 69.7
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 5.4e-21 104.0 78 65.4
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 7.0e-21 103.6 83 65.1
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 1.2e-20 102.8 80 65.0
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 2.0e-20 102.1 72 66.7
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 2.7e-20 101.7 78 65.4
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 3.5e-20 101.3 88 61.4
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 4.5e-20 100.9 79 65.8
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 5.9e-20 100.5 78 65.4
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 7.7e-20 100.1 53 92.5
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 7.7e-20 100.1 80 63.8
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 1.0e-19 99.8 78 64.1
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 1.0e-19 99.8 78 61.5
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 1.3e-19 99.4 78 64.1
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 1.3e-19 99.4 71 67.6
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 1.7e-19 99.0 72 66.7
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 1.7e-19 99.0 76 64.5
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 1.7e-19 99.0 81 59.3
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 2.3e-19 98.6 78 62.8
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 2.3e-19 98.6 79 64.6
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 2.3e-19 98.6 78 64.1
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 2.9e-19 98.2 79 64.6
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 3.8e-19 97.8 63 74.6
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 3.8e-19 97.8 63 74.6
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 3.8e-19 97.8 76 64.5
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 3.8e-19 97.8 79 59.5
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 3.8e-19 97.8 75 64.0
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 6.6e-19 97.1 74 58.1
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 1.1e-18 96.3 78 62.8
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 1.5e-18 95.9 77 66.2
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 1.9e-18 95.5 81 63.0
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 1.9e-18 95.5 80 61.2
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 4.2e-18 94.4 78 62.8
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 5.5e-18 94.0 81 64.2
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 9.5e-18 93.2 83 57.8
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 1.2e-17 92.8 75 60.0
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 1.2e-17 92.8 81 60.5
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 1.2e-17 92.8 75 65.3
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 3.6e-17 91.3 78 60.3
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 3.6e-17 91.3 83 61.4
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 4.7e-17 90.9 79 55.7
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 4.7e-17 90.9 72 61.1
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 6.1e-17 90.5 58 70.7
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 6.1e-17 90.5 58 75.9
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 8.0e-17 90.1 76 61.8
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 2.3e-16 88.6 78 57.7
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 2.3e-16 88.6 82 54.9
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 3.0e-16 88.2 55 70.9
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 5.2e-16 87.4 80 60.0
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 6.8e-16 87.0 60 65.0
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 6.8e-16 87.0 60 65.0
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 8.9e-16 86.7 75 56.0
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 8.9e-16 86.7 75 57.3
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 2.0e-15 85.5 75 54.7
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 2.0e-15 85.5 101 48.5
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 2.6e-15 85.1 55 67.3
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 2.6e-15 85.1 55 67.3
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 2.6e-15 85.1 55 67.3
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 4.4e-15 84.3 75 52.0
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 4.4e-15 84.3 75 52.0
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 9.8e-15 83.2 71 60.6
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 2.2e-14 82.0 75 52.0
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 8.3e-14 80.1 62 62.9
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 1.4e-13 79.3 118 40.7
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 1.4e-13 79.3 58 60.3
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 2.4e-13 78.6 116 41.4
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 5.4e-13 77.4 61 60.7
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 5.4e-13 77.4 54 63.0
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 1.7e-11 72.4 46 71.7
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 3.6e-09 64.7 80 50.0
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 1.4e-08 62.8 35 82.9
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 4.4e-07 57.8 37 70.3


User provided reference genes

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