Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008415 Solanum tuberosum HOM05D002225 ORTHO05D002271 1.1e-103 380.2 215 100.0
Solyc04g009340.3 Solanum lycopersicum HOM05D002225 ORTHO05D002271 2.2e-72 276.2 220 70.0
Sopen04g004460 Solanum pennellii HOM05D002225 ORTHO05D002271 2.8e-72 275.8 220 70.0
PGSC0003DMG400032542 Solanum tuberosum HOM05D002225 ORTHO05D002271 6.3e-72 274.6 220 70.9
CAN.G624.21 Capsicum annuum HOM05D002225 ORTHO05D002271 4.3e-60 235.3 221 62.4
Nitab4.5_0002113g0120 Nicotiana tabacum HOM05D002225 ORTHO05D002271 3.7e-56 222.2 206 63.6
Peaxi162Scf00760g00022 Petunia axillaris HOM05D002225 ORTHO05D002271 8.3e-56 221.1 229 58.5
Nitab4.5_0007261g0040 Nicotiana tabacum HOM05D002225 ORTHO05D002271 3.5e-54 215.7 194 63.9
Lj6A722G88 Lonicera japonica HOM05D002225 ORTHO05D002271 1.1e-42 177.6 194 53.6
Glyma.11G104000 Glycine max HOM05D002225 ORTHO05D002271 4.4e-41 172.2 168 57.1
GSVIVG01010189001 Vitis vinifera HOM05D002225 ORTHO05D002271 5.4e-39 165.2 194 50.5
Dinv26526 Davidia involucrata HOM05D002225 ORTHO05D002271 1.2e-38 164.1 194 51.0
Cc01_g13630 Coffea canephora HOM05D002225 ORTHO05D002271 2.1e-38 163.3 198 49.5
Prupe.1G344700 Prunus persica HOM05D002225 ORTHO05D002271 6.0e-38 161.8 244 44.3
VMungo1127G1685 Vigna mungo HOM05D002225 ORTHO05D002271 7.8e-38 161.4 234 43.6
Manes.03G080700 Manihot esculenta HOM05D002225 ORTHO05D002271 1.0e-37 161.0 201 48.8
Potri.010G171100 Populus trichocarpa HOM05D002225 ORTHO05D002271 2.3e-37 159.8 201 47.8
Sabra10G0130600 Salix brachista HOM05D002225 ORTHO05D002271 3.9e-37 159.1 201 47.3
arahy.Tifrunner.gnm1.ann1.RAZH9U Arachis hypogaea HOM05D002225 ORTHO05D002271 6.6e-37 158.3 202 47.0
arahy.Tifrunner.gnm1.ann1.X31W74 Arachis hypogaea HOM05D002225 ORTHO05D002271 6.6e-37 158.3 202 47.0
Potri.008G085700 Populus trichocarpa HOM05D002225 ORTHO05D002271 6.6e-37 158.3 201 47.3
Aqoxy3G04242 Aquilegia oxysepala HOM05D002225 ORTHO05D002271 1.5e-36 157.1 194 47.9
Nn4g24911 Nelumbo nucifera HOM05D002225 ORTHO05D002271 3.3e-36 156.0 194 47.4
COL.COLO4_16616 Corchorus olitorius HOM05D002225 ORTHO05D002271 5.6e-36 155.2 196 46.9
FAN07G1200 Fragaria x ananassa HOM05D002225 ORTHO05D002271 9.5e-36 154.5 235 43.8
Oeu044074.1 Olea europaea HOM05D002225 ORTHO05D002271 9.5e-36 154.5 193 46.1
Phvul.011G032200 Phaseolus vulgaris HOM05D002225 ORTHO05D002271 9.5e-36 154.5 194 46.4
Ciclev10031032m.g Citrus clementina HOM05D002225 ORTHO05D002271 1.2e-35 154.1 197 46.7
FAN17G0793 Fragaria x ananassa HOM05D002225 ORTHO05D002271 1.6e-35 153.7 235 43.4
CiPaw.05G167700 Carya illinoinensis HOM05D002225 ORTHO05D002271 2.1e-35 153.3 204 45.1
Sabra08G0063400 Salix brachista HOM05D002225 ORTHO05D002271 2.1e-35 153.3 195 48.2
TWI74G0237 Tripterygium wilfordii HOM05D002225 ORTHO05D002271 3.6e-35 152.5 206 43.7
FvH4_4g36670 Fragaria vesca HOM05D002225 ORTHO05D002271 4.7e-35 152.1 235 43.4
FAN12G1732 Fragaria x ananassa HOM05D002225 ORTHO05D002271 6.2e-35 151.8 236 43.2
Cfa008724 Carpinus fangiana HOM05D002225 ORTHO05D002271 8.1e-35 151.4 204 44.1
AUR62012862 Chenopodium quinoa HOM05D002225 ORTHO05D002271 8.1e-35 151.4 194 46.4
Glyma.12G028900 Glycine max HOM05D002225 ORTHO05D002271 8.1e-35 151.4 194 46.9
MD16G1005900 Malus domestica HOM05D002225 ORTHO05D002271 8.1e-35 151.4 204 46.6
EL10Ac9g22904 Beta vulgaris HOM05D002225 ORTHO05D002271 1.1e-34 151.0 218 42.7
MD13G1008400 Malus domestica HOM05D002225 ORTHO05D002271 1.4e-34 150.6 204 45.1
Medtr4g074220 Medicago truncatula HOM05D002225 ORTHO05D002271 2.3e-34 149.8 194 45.9
Duzib248G1623 Durio zibethinus HOM05D002225 ORTHO05D002271 4.0e-34 149.1 208 44.7
Psat7g174200 Pisum sativum HOM05D002225 ORTHO05D002271 5.2e-34 148.7 195 45.1
TWI53G1061 Tripterygium wilfordii HOM05D002225 ORTHO05D002271 5.2e-34 148.7 206 42.7
Haze_11735 Corylus avellana HOM05D002225 ORTHO05D002271 6.8e-34 148.3 204 43.1
Atru.BG.278.p Acer truncatum HOM05D002225 ORTHO05D002271 8.9e-34 147.9 190 44.7
CSS0033303 Camellia sinensis var. sinensis HOM05D002225 ORTHO05D002271 8.9e-34 147.9 194 45.9
Hma1.2p1_0285F.1_g113930 Hydrangea macrophylla HOM05D002225 ORTHO05D002271 8.9e-34 147.9 194 46.9
TPR.G21565 Trifolium pratense HOM05D002225 ORTHO05D002271 1.5e-33 147.1 194 44.8
PGR044G0003 Punica granatum HOM05D002225 ORTHO05D002271 3.4e-33 146.0 202 44.1
Gohir.D01G138600 Gossypium hirsutum HOM05D002225 ORTHO05D002271 5.8e-33 145.2 207 44.0
Gorai.002G167300 Gossypium raimondii HOM05D002225 ORTHO05D002271 5.8e-33 145.2 207 44.0
TAR629G0799 Trochodendron aralioides HOM05D002225 ORTHO05D002271 7.6e-33 144.8 195 45.6
Gohir.A01G146100 Gossypium hirsutum HOM05D002225 ORTHO05D002271 9.9e-33 144.4 207 44.0
Hund24314 Selenicereus undatus HOM05D002225 ORTHO05D002271 1.3e-32 144.1 193 45.6
Duzib268G1460 Durio zibethinus HOM05D002225 ORTHO05D002271 2.2e-32 143.3 196 43.9
ECA234G4283 Erigeron canadensis HOM05D002225 ORTHO05D002271 2.2e-32 143.3 199 44.7
SalBow2G1711 Salvia bowleyana HOM05D002225 ORTHO05D002271 2.9e-32 142.9 234 41.0
Ca_03041_v3 Cicer arietinum L. HOM05D002225 ORTHO05D002271 4.9e-32 142.1 193 44.0
Thecc.02G295200 Theobroma cacao HOM05D002225 ORTHO05D002271 4.9e-32 142.1 207 42.5
Eucgr.J00840 Eucalyptus grandis HOM05D002225 ORTHO05D002271 6.4e-32 141.7 195 44.6
PSO063G0669 Papaver somniferum HOM05D002225 ORTHO05D002271 6.4e-32 141.7 196 46.4
Lalb_Chr19g0139291 Lupinus albus HOM05D002225 ORTHO05D002271 1.1e-31 141.0 197 45.2
ATR0618G231 Amborella trichopoda HOM05D002225 ORTHO05D002271 1.4e-31 140.6 194 44.3
CDE05G2843 Ceratophyllum demersum HOM05D002225 ORTHO05D002271 1.4e-31 140.6 206 42.7
PSO782G2120 Papaver somniferum HOM05D002225 ORTHO05D002271 1.9e-31 140.2 196 45.9
Ah.01g013070 Amaranthus hybridus HOM05D002225 ORTHO05D002271 2.4e-31 139.8 202 43.1
Lsat_1_v5_gn_4_26401 Lactuca sativa HOM05D002225 ORTHO05D002271 3.2e-31 139.4 194 43.8
HanXRQChr01g0028531 Helianthus annuus HOM05D002225 ORTHO05D002271 4.1e-31 139.0 207 43.5
CANSAT64G1256 Cannabis sativa HOM05D002225 ORTHO05D002271 5.4e-31 138.7 194 43.8
Lj3g0008787 Lotus japonicus HOM05D002225 ORTHO05D002271 2.1e-30 136.7 204 42.6
DCAR_026916 Daucus carota HOM05D002225 ORTHO05D002271 7.8e-30 134.8 194 42.3
Actinidia04313 Actinidia chinensis HOM05D002225 ORTHO05D002271 3.9e-29 132.5 195 41.0
Migut.L00850 Erythranthe guttata HOM05D002225 ORTHO05D002271 5.1e-29 132.1 233 37.3
vmacro16008 Vaccinium macrocarpon HOM05D002225 ORTHO05D002271 5.1e-29 132.1 250 36.0
ClCG11G001120 Citrullus lanatus HOM05D002225 ORTHO05D002271 1.5e-28 130.6 205 42.4
AUR62034079 Chenopodium quinoa HOM05D002225 ORTHO05D002271 1.9e-28 130.2 187 43.9
CsaV3_5G013170 Cucumis sativus L. HOM05D002225 ORTHO05D002271 1.9e-28 130.2 205 42.4
Carub.0003s1979 Capsella rubella HOM05D002225 ORTHO05D002271 2.5e-28 129.8 197 41.1
Migut.L00855 Erythranthe guttata HOM05D002225 ORTHO05D002271 2.5e-28 129.8 195 41.0
SGA_v2.0_scaffold258G45747 Striga asiatica HOM05D002225 ORTHO05D002271 3.3e-28 129.4 223 37.7
Aa31LG8G6750 Aethionema arabicum HOM05D002225 ORTHO05D002271 4.3e-28 129.0 200 40.5
BcaC09g48946 Brassica carinata HOM05D002225 ORTHO05D002271 4.3e-28 129.0 206 41.3
MELO3C020035.2 Cucumis melo HOM05D002225 ORTHO05D002271 7.3e-28 128.3 195 43.6
Sed0022813 Sechium edule HOM05D002225 ORTHO05D002271 9.6e-28 127.9 195 43.1
Sp3g17900 Schrenkiella parvula HOM05D002225 ORTHO05D002271 3.6e-27 125.9 197 40.1
unitig_22.g6362 Utricularia gibba HOM05D002225 ORTHO05D002271 4.7e-27 125.6 153 45.1
AT3G19895 Arabidopsis thaliana HOM05D002225 ORTHO05D002271 1.1e-26 124.4 197 39.6
AL3G33450 Arabidopsis lyrata HOM05D002225 ORTHO05D002271 1.4e-26 124.0 197 39.6
A01p34860 Brassica napus HOM05D002225 ORTHO05D002271 3.1e-26 122.9 201 39.3
BraA01t03569Z Brassica rapa HOM05D002225 ORTHO05D002271 3.1e-26 122.9 201 39.3
THA.LOC104826520 Tarenaya hassleriana HOM05D002225 ORTHO05D002271 3.1e-26 122.9 215 39.5
CARHR095420 Cardamine hirsuta HOM05D002225 ORTHO05D002271 4.0e-26 122.5 197 40.1
C01p44260 Brassica napus HOM05D002225 ORTHO05D002271 6.9e-26 121.7 224 37.9
BolC1t04386H Brassica oleracea HOM05D002225 ORTHO05D002271 6.9e-26 121.7 224 37.9
Thhalv10020435m.g Eutrema salsugineum HOM05D002225 ORTHO05D002271 6.9e-26 121.7 194 39.2
RcHm_v2.0_Chr4g0446381 Rosa chinensis HOM05D002225 ORTHO05D002271 4.2e-23 112.5 163 42.9
AUR62017648 Chenopodium quinoa HOM05D002225 ORTHO05D002271 5.4e-23 112.1 163 42.3
THA.LOC104809148 Tarenaya hassleriana HOM05D002225 ORTHO05D002271 7.1e-23 111.7 221 36.2
SEGI_40865 Sequoiadendron giganteum HOM05D002225 ORTHO05D002271 7.8e-22 108.2 196 38.3
Mapoly0105s0037 Marchantia polymorpha HOM05D002225 ORTHO05D002271 1.3e-19 100.9 228 33.8
MBI03_g05110_MAGBIO Magnolia biondii HOM05D002225 ORTHO05D002271 2.8e-19 99.8 146 44.5
COL.COLO4_02877 Corchorus olitorius HOM05D002225 ORTHO05D002271 2.9e-16 89.7 63 71.4
QL04p074444 Quercus lobata HOM05D002225 ORTHO05D002271 2.9e-16 89.7 71 66.2
Pp3c2_29300 Physcomitrium patens HOM05D002225 ORTHO05D002271 1.1e-15 87.8 200 34.0
MBI06_g27719_MAGBIO Magnolia biondii HOM05D002225 ORTHO05D002271 9.3e-15 84.7 63 63.5
AagrBONN_evm.TU.Sc2ySwM_368.1356 Anthoceros agrestis HOM05D002225 ORTHO05D002271 3.5e-14 82.8 204 31.9
Rhsim09G0072600 Rhododendron simsii HOM05D002225 ORTHO05D002271 3.5e-14 82.8 85 55.3
CDE05G0641 Ceratophyllum demersum HOM05D002225 ORTHO05D002271 7.9e-14 81.6 84 54.8
Pp3c11_2010 Physcomitrium patens HOM05D002225 ORTHO05D002271 7.9e-14 81.6 211 29.9
SMO228G0155 Selaginella moellendorffii HOM05D002225 ORTHO05D002271 2.8e-11 73.2 196 31.1
Cc08_g10240 Coffea canephora HOM05D002225 ORTHO05D002271 6.2e-11 72.0 53 73.6
MBI06_g27720_MAGBIO Magnolia biondii HOM05D000369 ORTHO05D000253 6.2e-11 72.0 87 48.3
ATR0568G197 Amborella trichopoda HOM05D002225 ORTHO05D002271 1.1e-10 71.2 63 60.3
Cc03_g14700 Coffea canephora HOM05D002225 ORTHO05D002271 1.5e-09 67.4 45 75.6
Thhalv10023509m.g Eutrema salsugineum HOM05D002225 ORTHO05D002271 1.5e-09 67.4 63 54.0
Pp3c7_24270 Physcomitrium patens HOM05D002225 ORTHO05D002271 4.5e-09 65.9 101 35.6
Cc01_g09690 Coffea canephora HOM05D002225 ORTHO05D002271 4.9e-08 62.4 48 70.8
Sc10g0006830 Simmondsia chinensis HOM05D002225 ORTHO05D002271 1.4e-07 60.8 44 68.2
Cc00_g29800 Coffea canephora HOM05D002225 ORTHO05D002271 4.2e-07 59.3 37 78.4
AUR62006276 Chenopodium quinoa HOM05D012323 ORTHO05D002271 9.3e-07 58.2 50 58.0
Cc10_g11780 Coffea canephora HOM05D002225 ORTHO05D002271 4.6e-06 55.8 44 68.2
Manes.06G171900 Manihot esculenta HOM05D001622 ORTHO05D007320 7.9e-06 55.1 219 27.9


User provided reference genes

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