Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 7.4e-77 290.4 143 100.0
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 2.0e-13 79.7 47 89.4
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 3.4e-13 79.0 47 89.4
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.1e-11 73.9 49 79.6
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 7.8e-10 67.8 73 52.1
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 1.0e-09 67.4 40 85.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.3e-09 66.2 66 51.5
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 2.3e-09 66.2 47 76.6
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.9e-09 65.5 51 68.6
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 3.9e-09 65.5 41 78.0
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 6.6e-09 64.7 66 54.5
PGSC0003DMG400043641 Solanum tuberosum HOM05D003084 ORTHO05D003580 1.5e-08 63.5 37 78.4
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 2.5e-08 62.8 47 66.0
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.3e-08 62.4 66 53.0
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 4.3e-08 62.0 56 66.1
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 7.3e-08 61.2 46 65.2
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 9.5e-08 60.8 70 48.6
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.2e-07 60.5 47 63.8
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.6e-07 60.1 47 63.8
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.1e-07 59.7 66 47.0
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.8e-07 59.3 66 50.0
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.8e-07 59.3 47 66.0
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.8e-07 59.3 47 66.0
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 50 60.0
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 50 60.0
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 50 60.0
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 50 60.0
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 50 60.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 50 60.0
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 4.7e-07 58.5 66 50.0
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 53 56.6
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 4.7e-07 58.5 53 56.6
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 4.7e-07 58.5 39 76.9
PGSC0003DMG400009195 Solanum tuberosum HOM05D003084 ORTHO05D003580 4.7e-07 58.5 38 63.2
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 6.2e-07 58.2 66 48.5
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 6.2e-07 58.2 47 63.8
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 6.2e-07 58.2 41 73.2
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 8.1e-07 57.8 66 47.0
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 8.1e-07 57.8 66 48.5
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 8.1e-07 57.8 38 78.9
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 8.1e-07 57.8 47 57.4
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-06 57.4 47 61.7
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-06 57.4 47 61.7
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 1.1e-06 57.4 38 81.6
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.8e-06 56.6 66 48.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.8e-06 56.6 41 73.2
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.8e-06 56.6 66 47.0
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 2.4e-06 56.2 42 66.7
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 2.4e-06 56.2 71 46.5
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 3.1e-06 55.8 38 76.3
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 3.1e-06 55.8 47 57.4
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 4.0e-06 55.5 41 70.7
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 5.2e-06 55.1 47 59.6
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 5.2e-06 55.1 66 47.0
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 6.8e-06 54.7 67 49.3
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 8.9e-06 54.3 38 73.7
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 8.9e-06 54.3 82 43.9
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 8.9e-06 54.3 37 78.4


User provided reference genes

Program Settings