Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007777 Solanum tuberosum HOM05D001930 ORTHO05D001345 7.5e-29 129.8 64 100.0
PGSC0003DMG401011931 Solanum tuberosum HOM05D001930 ORTHO05D001345 2.9e-25 117.9 77 80.5
PGSC0003DMG402011931 Solanum tuberosum HOM05D001930 ORTHO05D001345 2.9e-25 117.9 77 80.5
Sopen03g026190 Solanum pennellii HOM05D001930 ORTHO05D001345 1.5e-24 115.5 77 77.9
CAN.G301.5 Capsicum annuum HOM05D001930 ORTHO05D001345 1.2e-23 112.5 77 75.3
Sopen03g026280 Solanum pennellii HOM05D001930 ORTHO05D001345 2.6e-21 104.8 77 71.4
Sopen03g026220 Solanum pennellii HOM05D001930 ORTHO05D001345 1.7e-20 102.1 78 70.5
Peaxi162Scf01208g00017 Petunia axillaris HOM05D001930 ORTHO05D001345 1.1e-19 99.4 77 67.5
Nitab4.5_0003138g0040 Nicotiana tabacum HOM05D001930 ORTHO05D001345 9.2e-19 96.3 77 68.8
Migut.F00675 Erythranthe guttata HOM05D001930 ORTHO05D001345 1.4e-11 72.4 83 51.8
Nitab4.5_0000802g0030 Nicotiana tabacum HOM05D001930 ORTHO05D001345 1.9e-11 72.0 83 54.2
Lsat_1_v5_gn_8_12340 Lactuca sativa HOM05D001930 ORTHO05D001345 4.1e-11 70.9 76 50.0
Nn2g11456 Nelumbo nucifera HOM05D001930 ORTHO05D001345 1.2e-10 69.3 79 49.4
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 1.2e-10 69.3 81 50.6
Lalb_Chr17g0346731 Lupinus albus HOM05D001930 ORTHO05D001345 1.6e-10 68.9 60 50.0
Nn2g13688 Nelumbo nucifera HOM05D001930 ORTHO05D001345 1.6e-10 68.9 75 49.3
GSVIVG01032844001 Vitis vinifera HOM05D001930 ORTHO05D001345 1.6e-10 68.9 83 50.6
Aqoxy2G00919 Aquilegia oxysepala HOM05D001930 ORTHO05D001345 2.7e-10 68.2 75 52.0
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 6.0e-10 67.0 83 49.4
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 6.0e-10 67.0 76 46.1
CSS0031125 Camellia sinensis var. sinensis HOM05D001930 ORTHO05D001345 1.0e-09 66.2 75 52.0
Oeu064385.2 Olea europaea HOM05D001930 ORTHO05D001345 1.0e-09 66.2 83 48.2
PSO801G0843 Papaver somniferum HOM05D001930 ORTHO05D001345 1.0e-09 66.2 74 47.3
Nitab4.5_0008493g0010 Nicotiana tabacum HOM05D001930 ORTHO05D001345 1.3e-09 65.9 95 47.4
MSTRG.27324 Avicennia marina HOM05D001930 ORTHO05D001345 3.0e-09 64.7 81 45.7
CDE07G0205 Ceratophyllum demersum HOM05D001930 ORTHO05D001345 3.0e-09 64.7 76 43.4
Hma1.2p1_0281F.1_g113000 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 3.0e-09 64.7 83 47.0
SalBow6G0604 Salvia bowleyana HOM05D001930 ORTHO05D001345 3.0e-09 64.7 83 45.8
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 3.9e-09 64.3 77 44.2
Rhsim03G0142000 Rhododendron simsii HOM05D001930 ORTHO05D001345 3.9e-09 64.3 83 47.0
Nitab4.5_0002100g0020 Nicotiana tabacum HOM05D001930 ORTHO05D001345 5.0e-09 63.9 83 47.0
Lj8C68G6 Lonicera japonica HOM05D001930 ORTHO05D001345 6.6e-09 63.5 75 46.7
Solyc05g052715.1 Solanum lycopersicum HOM05D001930 ORTHO05D001345 6.6e-09 63.5 83 47.0
MSTRG.8950 Avicennia marina HOM05D001930 ORTHO05D001345 8.6e-09 63.2 83 45.8
CiPaw.01G297400 Carya illinoinensis HOM05D001930 ORTHO05D001345 8.6e-09 63.2 84 45.2
Hma1.2p1_0446F.1_g154590 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 1.1e-08 62.8 83 47.0
Lj1A953G44 Lonicera japonica HOM05D001930 ORTHO05D001345 1.1e-08 62.8 83 48.2
Cfa001331 Carpinus fangiana HOM05D001930 ORTHO05D001345 1.9e-08 62.0 87 42.5
arahy.Tifrunner.gnm1.ann1.238B6D Arachis hypogaea HOM05D001930 ORTHO05D001345 2.5e-08 61.6 78 44.9
arahy.Tifrunner.gnm1.ann1.84M4BY Arachis hypogaea HOM05D001930 ORTHO05D001345 2.5e-08 61.6 78 44.9
arahy.Tifrunner.gnm1.ann1.CY1II1 Arachis hypogaea HOM05D001930 ORTHO05D001345 2.5e-08 61.6 78 44.9
AUR62012234 Chenopodium quinoa HOM05D001930 ORTHO05D001345 2.5e-08 61.6 76 42.1
AUR62022866 Chenopodium quinoa HOM05D001930 ORTHO05D001345 2.5e-08 61.6 76 42.1
Lalb_Chr03g0043161 Lupinus albus HOM05D001930 ORTHO05D001345 3.3e-08 61.2 78 44.9
TAR369G0785 Trochodendron aralioides HOM05D001930 ORTHO05D001345 3.3e-08 61.2 75 45.3
Psat5g126440 Pisum sativum HOM05D001930 ORTHO05D001345 4.3e-08 60.8 82 46.3
Eucgr.G03055 Eucalyptus grandis HOM05D001930 ORTHO05D001345 5.6e-08 60.5 76 46.1
arahy.Tifrunner.gnm1.ann1.G8RZTB Arachis hypogaea HOM05D001930 ORTHO05D001345 7.3e-08 60.1 78 43.6
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 7.3e-08 60.1 78 43.6
CsaV3_6G001770 Cucumis sativus L. HOM05D001930 ORTHO05D001345 7.3e-08 60.1 76 46.1
Oeu048249.1 Olea europaea HOM05D001930 ORTHO05D001345 7.3e-08 60.1 82 45.1
Actinidia13930 Actinidia chinensis HOM05D001930 ORTHO05D001345 9.5e-08 59.7 75 45.3
MELO3C008291.2 Cucumis melo HOM05D001930 ORTHO05D001345 9.5e-08 59.7 77 45.5
Dinv23092 Davidia involucrata HOM05D001930 ORTHO05D001345 9.5e-08 59.7 74 43.2
Glyma.18G028700 Glycine max HOM05D001930 ORTHO05D001345 9.5e-08 59.7 77 44.2
DCAR_028566 Daucus carota HOM05D001930 ORTHO05D001345 1.2e-07 59.3 78 44.9
FvH4_7g24320 Fragaria vesca HOM05D001930 ORTHO05D001345 1.2e-07 59.3 77 45.5
FAN01G1543 Fragaria x ananassa HOM05D001930 ORTHO05D001345 1.2e-07 59.3 77 45.5
FAN03G2510 Fragaria x ananassa HOM05D001930 ORTHO05D001345 1.2e-07 59.3 77 45.5
FAN10G2989 Fragaria x ananassa HOM05D001930 ORTHO05D001345 1.2e-07 59.3 77 45.5
MBI14_g28262_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.2e-07 59.3 74 39.2
SGA_v2.0_scaffold44G16687 Striga asiatica HOM05D001930 ORTHO05D001345 1.2e-07 59.3 81 45.7
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 1.6e-07 58.9 74 47.3
HanXRQChr08g0222141 Helianthus annuus HOM05D001930 ORTHO05D001345 1.6e-07 58.9 77 46.8
Lsat_1_v5_gn_2_122761 Lactuca sativa HOM05D001930 ORTHO05D001345 1.6e-07 58.9 83 42.2
Medtr3g070300 Medicago truncatula HOM05D001930 ORTHO05D001345 1.6e-07 58.9 82 46.3
Oeu025644.2 Olea europaea HOM05D001930 ORTHO05D001345 1.6e-07 58.9 86 40.7
Glyma.11G228400 Glycine max HOM05D001930 ORTHO05D001345 2.1e-07 58.5 77 41.6
MD01G1132400 Malus domestica HOM05D001930 ORTHO05D001345 2.1e-07 58.5 77 44.2
RcHm_v2.0_Chr1g0369981 Rosa chinensis HOM05D001930 ORTHO05D001345 2.1e-07 58.5 76 44.7
ClCG11G006220 Citrullus lanatus HOM05D001930 ORTHO05D001345 2.8e-07 58.2 77 44.2
Glyma.18G199700 Glycine max HOM05D001930 ORTHO05D001345 2.8e-07 58.2 78 43.6
MD07G1220200 Malus domestica HOM05D001930 ORTHO05D001345 2.8e-07 58.2 76 44.7
Phvul.001G241800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 2.8e-07 58.2 77 44.2
Sabra16G0110800 Salix brachista HOM05D001930 ORTHO05D001345 2.8e-07 58.2 82 39.0
TPR.G2544 Trifolium pratense HOM05D001930 ORTHO05D001345 2.8e-07 58.2 81 44.4
Actinidia00941 Actinidia chinensis HOM05D001930 ORTHO05D001345 3.6e-07 57.8 75 42.7
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 3.6e-07 57.8 89 42.7
arahy.Tifrunner.gnm1.ann1.P8UNKF Arachis hypogaea HOM05D001930 ORTHO05D001345 3.6e-07 57.8 89 42.7
Lj6g0015169 Lotus japonicus HOM05D001930 ORTHO05D001345 3.6e-07 57.8 76 39.5
LjContig00142g0017848 Lotus japonicus HOM05D001930 ORTHO05D001345 3.6e-07 57.8 76 39.5
Prupe.6G275700 Prunus persica HOM05D001930 ORTHO05D001345 3.6e-07 57.8 86 39.5
CANSAT56G4542 Cannabis sativa HOM05D001930 ORTHO05D001345 4.7e-07 57.4 78 42.3
ECA238G2369 Erigeron canadensis HOM05D001930 ORTHO05D001345 6.2e-07 57.0 76 43.4
Potri.016G114900 Populus trichocarpa HOM05D001930 ORTHO05D001345 6.2e-07 57.0 82 37.8
Sed0016379 Sechium edule HOM05D001930 ORTHO05D001345 6.2e-07 57.0 77 44.2
VMungo1383G0091 Vigna mungo HOM05D001930 ORTHO05D001345 6.2e-07 57.0 77 42.9
Ciclev10030993m.g Citrus clementina HOM05D001930 ORTHO05D001345 8.1e-07 56.6 76 43.4
Glyma.14G060100 Glycine max HOM05D001930 ORTHO05D001345 8.1e-07 56.6 79 40.5
Phvul.008G105200 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 8.1e-07 56.6 78 42.3
PGR142G0208 Punica granatum HOM05D001930 ORTHO05D001345 8.1e-07 56.6 77 44.2
MD12G1164800 Malus domestica HOM05D001930 ORTHO05D001345 1.1e-06 56.2 80 40.0
EL10Ac2g04813 Beta vulgaris HOM05D001930 ORTHO05D001345 1.4e-06 55.8 76 39.5
CANSAT35G1762 Cannabis sativa HOM05D001930 ORTHO05D001345 1.4e-06 55.8 90 41.1
Ca_07629_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 1.4e-06 55.8 78 42.3
MBI02_g39000_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.4e-06 55.8 75 37.3
Medtr7g068220 Medicago truncatula HOM05D001930 ORTHO05D001345 1.4e-06 55.8 78 41.0
VMungo1383G2844 Vigna mungo HOM05D001930 ORTHO05D001345 1.4e-06 55.8 78 43.6
Ah.10g036510 Amaranthus hybridus HOM05D001930 ORTHO05D001345 1.8e-06 55.5 76 36.8
Atru.chr12.18 Acer truncatum HOM05D001930 ORTHO05D001345 2.3e-06 55.1 79 40.5
DCAR_024834 Daucus carota HOM05D001930 ORTHO05D001345 2.3e-06 55.1 77 41.6
Glyma.02G256600 Glycine max HOM05D001930 ORTHO05D001345 2.3e-06 55.1 89 40.4
Hund13841 Selenicereus undatus HOM05D001930 ORTHO05D001345 2.3e-06 55.1 76 39.5
Thecc.10G020700 Theobroma cacao HOM05D001930 ORTHO05D001345 2.3e-06 55.1 79 41.8
Haze_20991 Corylus avellana HOM05D001930 ORTHO05D001345 3.1e-06 54.7 55 52.7
MBI05_g34494_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 3.1e-06 54.7 74 36.5
Phvul.008G224800 Phaseolus vulgaris HOM05D001930 ORTHO05D001345 3.1e-06 54.7 88 38.6
Psat3g128880 Pisum sativum HOM05D001930 ORTHO05D001345 3.1e-06 54.7 78 39.7
VMungo0647G2500 Vigna mungo HOM05D001930 ORTHO05D001345 3.1e-06 54.7 88 38.6
Cpa.g.sc19.190 Carica papaya HOM05D001930 ORTHO05D001345 4.0e-06 54.3 74 37.8
TWI74G0539 Tripterygium wilfordii HOM05D001930 ORTHO05D001345 4.0e-06 54.3 76 42.1
HPP92_019257 Vanilla planifolia HOM05D001930 ORTHO05D001345 6.8e-06 53.5 74 40.5
Atru.chr8.2224 Acer truncatum HOM05D001930 ORTHO05D001345 8.9e-06 53.1 78 39.7
AT2G40070 Arabidopsis thaliana HOM05D001930 ORTHO05D001345 8.9e-06 53.1 72 43.1
CANSAT56G0325 Cannabis sativa HOM05D001930 ORTHO05D001345 8.9e-06 53.1 77 41.6
Cfa017216 Carpinus fangiana HOM05D001930 ORTHO05D001345 8.9e-06 53.1 55 50.9


User provided reference genes

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