Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007753 Solanum tuberosum HOM05D008218 ORTHO05D010347 5.1e-131 471.1 240 100.0
PGSC0003DMG400037611 Solanum tuberosum HOM05D008218 ORTHO05D000001 3.5e-31 139.4 120 63.3
PGSC0003DMG400007755 Solanum tuberosum HOM05D000007 ORTHO05D024778 3.7e-28 129.4 79 79.7
PGSC0003DMG400038734 Solanum tuberosum HOM05D000007 ORTHO05D024778 1.1e-27 127.9 79 79.7
PGSC0003DMG400013225 Solanum tuberosum HOM05D000007 ORTHO05D024778 3.4e-26 122.9 79 75.9
Sopen01g016920 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-23 111.7 73 71.2
Sopen10g004490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-21 107.5 73 67.1
PGSC0003DMG400012022 Solanum tuberosum HOM05D000007 ORTHO05D024778 1.5e-21 107.5 70 75.7
Sopen01g036790 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-19 100.5 78 62.8
Sopen02g031060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-19 100.5 78 62.8
Sopen08g020290 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-19 100.1 71 66.2
Sopen11g013670 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-19 99.8 67 70.1
Phvul.008G131550 Phaseolus vulgaris HOM05D008218 ORTHO05D010347 4.4e-13 79.3 44 90.9
Hma1.2p1_0149F.1_g066410 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 7.4e-13 78.6 44 90.9
Prupe.8G198600 Prunus persica HOM05D008218 ORTHO05D010347 1.7e-12 77.4 44 90.9
Peaxi162Scf00705g00015 Petunia axillaris HOM05D000007 ORTHO05D000039 2.2e-12 77.0 73 54.8
TWI36G0894 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 2.2e-12 77.0 44 88.6
RcHm_v2.0_Chr6g0284071 Rosa chinensis HOM05D008218 ORTHO05D010347 3.7e-12 76.3 44 88.6
FAN27G2427 Fragaria x ananassa HOM05D008218 ORTHO05D010347 1.4e-11 74.3 43 88.4
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.4e-11 73.6 73 52.1
FAN15G3347 Fragaria x ananassa HOM05D008218 ORTHO05D010347 3.1e-11 73.2 43 86.0
Solyc06g063390.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 5.3e-11 72.4 45 86.7
Solyc06g063400.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 9.1e-11 71.6 45 84.4
COL.COLO4_08652 Corchorus olitorius HOM05D008218 ORTHO05D010347 1.5e-10 70.9 44 86.4
Gohir.A07G161100 Gossypium hirsutum HOM05D008218 ORTHO05D010347 7.7e-10 68.6 44 81.8
Gohir.D07G164600 Gossypium hirsutum HOM05D008218 ORTHO05D010347 7.7e-10 68.6 44 81.8
Potri.002G246300 Populus trichocarpa HOM05D008218 ORTHO05D010347 7.7e-10 68.6 44 81.8
Gohir.D11G145833 Gossypium hirsutum HOM05D008218 ORTHO05D010347 1.7e-09 67.4 44 81.8
Lsat_1_v5_gn_2_120021 Lactuca sativa HOM05D009582 ORTHO05D010347 1.7e-09 67.4 44 79.5
Nn7g36571 Nelumbo nucifera HOM05D008218 ORTHO05D010347 1.7e-09 67.4 44 81.8
Thecc.01G219400 Theobroma cacao HOM05D008218 ORTHO05D010347 1.7e-09 67.4 44 81.8
Thecc.05G251000 Theobroma cacao HOM05D008218 ORTHO05D010347 1.7e-09 67.4 44 79.5
TWI18G1398 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 1.7e-09 67.4 44 81.8
CiPaw.13G048900 Carya illinoinensis HOM05D008218 ORTHO05D010347 2.2e-09 67.0 44 79.5
CsaV3_3G030050 Cucumis sativus L. HOM05D008218 ORTHO05D010347 2.2e-09 67.0 45 82.2
CAN.G874.7 Capsicum annuum HOM05D008218 ORTHO05D010347 3.8e-09 66.2 44 81.8
Lalb_Chr19g0125871 Lupinus albus HOM05D008218 ORTHO05D010347 3.8e-09 66.2 44 79.5
Nitab4.5_0013864g0040 Nicotiana tabacum HOM05D008218 ORTHO05D010347 3.8e-09 66.2 44 79.5
Solyc06g083340.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 3.8e-09 66.2 44 81.8
PGSC0003DMG400020101 Solanum tuberosum HOM05D008218 ORTHO05D010347 3.8e-09 66.2 44 81.8
Mapoly0087s0005 Marchantia polymorpha HOM05D008218 ORTHO05D010347 5.0e-09 65.9 44 75.0
Duzib211G0660 Durio zibethinus HOM05D008218 ORTHO05D010347 8.5e-09 65.1 44 79.5
TWI75G0809 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 8.5e-09 65.1 44 79.5
FAN24G2161 Fragaria x ananassa HOM05D008218 ORTHO05D010347 1.4e-08 64.3 64 60.9
Hund18437 Selenicereus undatus HOM05D008218 ORTHO05D010347 1.4e-08 64.3 44 79.5
EL10Ac7g17908 Beta vulgaris HOM05D008218 ORTHO05D010347 1.9e-08 63.9 52 71.2
Hma1.2p1_0226F.1_g095360 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 1.9e-08 63.9 44 77.3
MELO3C029169.2 Cucumis melo HOM05D008218 ORTHO05D010347 2.5e-08 63.5 53 67.9
Manes.12G047600 Manihot esculenta HOM05D008218 ORTHO05D010347 2.5e-08 63.5 44 75.0
THA.LOC104818972 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 2.5e-08 63.5 44 79.5
THA.LOC104822489 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 2.5e-08 63.5 44 79.5
Duzib133G0946 Durio zibethinus HOM05D008218 ORTHO05D010347 4.2e-08 62.8 44 77.3
Migut.D02504 Erythranthe guttata HOM05D008218 ORTHO05D010347 4.2e-08 62.8 44 77.3
Manes.13G049700 Manihot esculenta HOM05D008218 ORTHO05D010347 4.2e-08 62.8 44 77.3
Thhalv10021897m.g Eutrema salsugineum HOM05D008218 ORTHO05D010347 7.2e-08 62.0 44 75.0
AL3G18510 Arabidopsis lyrata HOM05D008218 ORTHO05D010347 9.4e-08 61.6 44 75.0
AT3G07230 Arabidopsis thaliana HOM05D008218 ORTHO05D010347 9.4e-08 61.6 44 75.0
Gohir.A07G093000 Gossypium hirsutum HOM05D008218 ORTHO05D010347 9.4e-08 61.6 44 75.0
Os12g0405700 Oryza sativa ssp. japonica HOM05D008218 ORTHO05D010347 9.4e-08 61.6 45 80.0
Aa31LG5G17820 Aethionema arabicum HOM05D008218 ORTHO05D010347 1.2e-07 61.2 44 75.0
Carub.0003s0676 Capsella rubella HOM05D008218 ORTHO05D010347 1.2e-07 61.2 44 75.0
CiPaw.14G038700 Carya illinoinensis HOM05D008218 ORTHO05D010347 1.2e-07 61.2 44 72.7
Potri.014G191300 Populus trichocarpa HOM05D008218 ORTHO05D010347 1.2e-07 61.2 43 76.7
PGR044G2382 Punica granatum HOM05D008218 ORTHO05D010347 1.6e-07 60.8 44 75.0
CARHR081880 Cardamine hirsuta HOM05D008218 ORTHO05D010347 2.7e-07 60.1 44 72.7
Gohir.A11G139700 Gossypium hirsutum HOM05D008218 ORTHO05D010347 2.7e-07 60.1 44 81.8
PSO017G0111 Papaver somniferum HOM05D008218 ORTHO05D010347 3.6e-07 59.7 44 77.3
PSO170G1121 Papaver somniferum HOM05D008218 ORTHO05D010347 3.6e-07 59.7 44 77.3
PSO170G3918 Papaver somniferum HOM05D008218 ORTHO05D010347 3.6e-07 59.7 44 77.3
Nitab4.5_0003020g0060 Nicotiana tabacum HOM05D008218 ORTHO05D010347 1.0e-06 58.2 53 64.2
Glyma.18G159800 Glycine max HOM05D008218 ORTHO05D010347 1.4e-06 57.8 44 70.5
PSO357G0222 Papaver somniferum HOM05D008218 ORTHO05D010347 1.4e-06 57.8 44 75.0
Glyma.08G348200 Glycine max HOM05D008218 ORTHO05D010347 6.7e-06 55.5 44 68.2


User provided reference genes

Program Settings