Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007741 Solanum tuberosum HOM05D003115 ORTHO05D003595 6.5e-137 490.7 249 100.0
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 1.5e-133 479.6 248 97.6
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 2.0e-133 479.2 248 97.6
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 1.4e-123 446.4 250 91.2
CAN.G1155.21 Capsicum annuum HOM05D003115 ORTHO05D003595 5.0e-121 438.0 250 90.0
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 5.2e-118 427.9 249 88.4
PGSC0003DMG400026434 Solanum tuberosum HOM05D003115 ORTHO05D003595 4.7e-95 351.7 174 100.0
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 6.0e-90 334.7 254 67.3
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 9.9e-77 290.8 254 59.1
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 6.4e-76 288.1 255 60.4
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 4.1e-75 285.4 255 59.6
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 2.1e-74 283.1 254 59.4
Oeu002918.1 Olea europaea HOM05D003115 ORTHO05D003595 3.5e-74 282.3 257 59.9
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 7.8e-74 281.2 252 60.3
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 1.7e-73 280.0 254 59.4
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 5.1e-73 278.5 254 58.7
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 1.5e-72 276.9 253 55.7
Cfa010533 Carpinus fangiana HOM05D003115 ORTHO05D003595 2.5e-72 276.2 254 58.7
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 5.6e-72 275.0 250 57.2
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 1.4e-70 270.4 250 58.8
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.4e-70 269.6 254 56.3
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.4e-70 269.6 254 56.3
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 2.0e-69 266.5 254 54.7
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 2.6e-69 266.2 254 56.7
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 2.2e-68 263.1 252 53.6
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 2.2e-68 263.1 254 54.3
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.9e-67 260.0 254 52.0
Oeu043446.1 Olea europaea HOM05D003115 ORTHO05D003595 1.9e-67 260.0 235 57.4
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 1.9e-67 260.0 251 57.0
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 3.2e-67 259.2 253 52.6
Aqoxy5G00431 Aquilegia oxysepala HOM05D003115 ORTHO05D003595 4.2e-67 258.8 253 54.2
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.6e-66 256.9 254 51.2
MBI17_g03746_MAGBIO Magnolia biondii HOM05D003115 ORTHO05D003595 6.0e-66 255.0 258 51.9
Prupe.3G077100 Prunus persica HOM05D003115 ORTHO05D003595 6.0e-66 255.0 254 52.0
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 7.8e-66 254.6 254 51.2
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 1.3e-65 253.8 254 50.8
Cc00_g09610 Coffea canephora HOM05D003115 ORTHO05D003595 2.3e-65 253.1 254 52.8
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.3e-65 253.1 254 50.8
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 3.0e-65 252.7 254 50.4
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 8.7e-65 251.1 250 52.4
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 4.8e-63 245.4 256 54.3
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 6.2e-63 245.0 255 49.8
Cpa.g.sc83.40 Carica papaya HOM05D003115 ORTHO05D003595 1.4e-62 243.8 255 52.9
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 7.6e-61 238.0 299 47.2
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 9.9e-61 237.7 259 48.6
MELO3C020422.2 Cucumis melo HOM05D003115 ORTHO05D003595 1.3e-60 237.3 253 52.2
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 2.2e-60 236.5 295 44.4
CsaV3_2G011790 Cucumis sativus L. HOM05D003115 ORTHO05D003595 6.4e-60 235.0 253 51.8
ClCG06G007990 Citrullus lanatus HOM05D003115 ORTHO05D003595 3.2e-59 232.6 253 51.0
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 3.2e-59 232.6 256 48.4
Potri.001G318800 Populus trichocarpa HOM05D003115 ORTHO05D003595 5.4e-59 231.9 255 48.6
TPR.G14704 Trifolium pratense HOM05D003115 ORTHO05D003595 9.3e-59 231.1 256 48.8
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 2.1e-58 229.9 272 48.2
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 2.7e-58 229.6 251 48.2
Psat0s3058g0040 Pisum sativum HOM05D003115 ORTHO05D003595 1.0e-57 227.6 254 48.8
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 1.0e-57 227.6 256 49.2
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 1.3e-57 227.3 256 48.4
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 2.3e-57 226.5 251 47.4
Sabra16G0201800 Salix brachista HOM05D003115 ORTHO05D003595 2.3e-57 226.5 255 47.1
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 3.0e-57 226.1 273 49.1
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 3.9e-57 225.7 273 49.1
Thecc.04G196300 Theobroma cacao HOM05D003115 ORTHO05D003595 5.1e-57 225.3 276 47.1
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 8.7e-57 224.6 273 49.1
Lalb_Chr23g0269101 Lupinus albus HOM05D003115 ORTHO05D003595 1.1e-56 224.2 256 48.0
A03p60500 Brassica napus HOM05D003115 ORTHO05D003595 1.5e-56 223.8 253 49.8
Carub.0007s0955 Capsella rubella HOM05D003115 ORTHO05D003595 2.5e-56 223.0 252 48.0
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 3.3e-56 222.6 254 46.1
Duzib212G0201 Durio zibethinus HOM05D003115 ORTHO05D003595 5.6e-56 221.9 276 47.1
PSO210G2420 Papaver somniferum HOM05D003115 ORTHO05D003595 7.4e-56 221.5 280 46.4
AT4G30990 Arabidopsis thaliana HOM05D003115 ORTHO05D003595 9.6e-56 221.1 249 48.2
Sp7g28860 Schrenkiella parvula HOM05D003115 ORTHO05D003595 9.6e-56 221.1 252 49.2
Aa31LG2G19350 Aethionema arabicum HOM05D003115 ORTHO05D003595 1.3e-55 220.7 252 49.2
Sed0014363 Sechium edule HOM05D003115 ORTHO05D003595 6.2e-55 218.4 254 50.8
CARHR238880 Cardamine hirsuta HOM05D003115 ORTHO05D003595 4.0e-54 215.7 255 46.7
PSO832G1670 Papaver somniferum HOM05D003115 ORTHO05D003595 9.0e-54 214.5 284 44.7
Carub.0001s2398 Capsella rubella HOM05D003115 ORTHO05D003595 1.3e-52 210.7 247 46.2
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 1.7e-52 210.3 248 46.8
AL1G41060 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 4.9e-52 208.8 245 46.5
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 4.9e-52 208.8 254 43.3
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 6.4e-52 208.4 252 46.0
AL1G38530 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 8.4e-52 208.0 246 45.9
AL7G21090 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 1.1e-51 207.6 252 47.6
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 1.4e-51 207.2 255 49.0
Thhalv10009353m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 1.4e-51 207.2 248 44.4
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 2.4e-51 206.5 251 45.4
Thhalv10024182m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 3.2e-51 206.1 257 45.9
COL.COLO4_33741 Corchorus olitorius HOM05D003115 ORTHO05D003595 1.2e-50 204.1 274 45.3
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 7.9e-50 201.4 251 43.8
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 1.3e-49 200.7 251 43.8
Carub.0005s0720 Capsella rubella HOM05D003115 ORTHO05D003595 1.8e-49 200.3 263 42.6
Hund29080 Selenicereus undatus HOM05D003115 ORTHO05D003595 3.0e-49 199.5 250 43.6
Hund29082 Selenicereus undatus HOM05D003115 ORTHO05D003595 3.0e-49 199.5 250 43.6
A09p40420 Brassica napus HOM05D003115 ORTHO05D003595 3.9e-49 199.1 256 43.4
HPP92_007262 Vanilla planifolia HOM05D003115 ORTHO05D003595 5.1e-49 198.7 262 42.7
BraA09t39538Z Brassica rapa HOM05D003115 ORTHO05D003595 6.7e-49 198.4 254 42.5
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 1.9e-48 196.8 250 44.8
C07p58370 Brassica napus HOM05D003115 ORTHO05D003595 4.3e-48 195.7 253 46.2
THA.LOC104808700 Tarenaya hassleriana HOM05D003115 ORTHO05D003595 1.3e-47 194.1 250 44.8
BolC7t46291H Brassica oleracea HOM05D003115 ORTHO05D003595 6.2e-47 191.8 253 45.5
unitig_578.g16273 Utricularia gibba HOM05D003115 ORTHO05D003595 8.2e-47 191.4 234 45.7
BcaNung02730 Brassica carinata HOM05D003115 ORTHO05D003595 1.4e-46 190.7 253 45.5
BcaNung01550 Brassica carinata HOM05D003115 ORTHO05D003595 1.2e-45 187.6 253 44.7
Atru.chr4.1598 Acer truncatum HOM05D003115 ORTHO05D003595 1.0e-44 184.5 214 50.0
CARHR024920 Cardamine hirsuta HOM05D003115 ORTHO05D003595 2.9e-44 183.0 249 42.6
AL1G39310 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 4.9e-44 182.2 223 45.3
Prupe.3G074200 Prunus persica HOM05D003115 ORTHO05D003595 6.0e-42 175.3 179 50.3
CANSAT78G1701 Cannabis sativa HOM05D003115 ORTHO05D003595 5.1e-41 172.2 186 47.8
BraA03t15089Z Brassica rapa HOM05D003115 ORTHO05D003595 1.1e-40 171.0 254 40.9
CDE07G0216 Ceratophyllum demersum HOM05D003115 ORTHO05D003595 1.1e-40 171.0 249 39.4
Haze_07640 Corylus avellana HOM05D003115 ORTHO05D003595 1.2e-34 151.0 179 49.2
Ca_07922_v3 Cicer arietinum L. HOM05D003115 ORTHO05D003595 7.9e-34 148.3 179 44.7
Cc00_g09570 Coffea canephora HOM05D003115 ORTHO05D003595 1.1e-32 144.4 128 55.5
Cc00_g27550 Coffea canephora HOM05D003115 ORTHO05D003595 7.4e-32 141.7 128 54.7
SEGI_02895 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 1.3e-31 141.0 260 34.2
SEGI_04472 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 1.3e-31 141.0 260 34.2
PGSC0003DMG400007742 Solanum tuberosum HOM05D000005 ORTHO05D003595 8.2e-31 138.3 76 94.7
Psat4g000360 Pisum sativum HOM05D003115 ORTHO05D003595 2.6e-29 133.3 180 41.1
HPP92_007257 Vanilla planifolia HOM05D003115 ORTHO05D003595 2.6e-29 133.3 202 39.1
C05p23800 Brassica napus HOM05D003115 ORTHO05D003595 1.0e-28 131.3 223 34.5
Rhsim02G0023500 Rhododendron simsii HOM05D003115 ORTHO05D003595 1.4e-27 127.5 219 38.4
BcaC05g26355 Brassica carinata HOM05D003115 ORTHO05D003595 4.8e-23 112.5 126 48.4
Pp3c3_18970 Physcomitrium patens HOM05D003115 ORTHO05D003595 1.4e-22 110.9 261 29.1
CARHR255300 Cardamine hirsuta HOM05D003115 ORTHO05D003595 4.5e-21 105.9 185 37.8
BraA09t42180Z Brassica rapa HOM05D003115 ORTHO05D003595 7.7e-21 105.1 216 32.9
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 1.0e-20 104.8 268 28.4
COL.COLO4_08387 Corchorus olitorius HOM05D003115 ORTHO05D003595 2.6e-16 90.1 143 40.6
Hund16694 Selenicereus undatus HOM05D003115 ORTHO05D003595 2.0e-13 80.5 126 38.9
Rhsim07G0171500 Rhododendron simsii HOM05D003115 ORTHO05D003595 3.5e-13 79.7 94 47.9
Rhsim07G0171100 Rhododendron simsii HOM05D003115 ORTHO05D003595 5.9e-13 79.0 94 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2833 Anthoceros agrestis HOM05D003115 ORTHO05D003595 5.5e-11 72.4 138 31.2
Actinidia10072 Actinidia chinensis HOM05D003115 ORTHO05D003595 9.4e-11 71.6 49 67.3
BcaC05g26356 Brassica carinata HOM05D003115 ORTHO05D003595 4.7e-10 69.3 91 38.5
AUR62038226 Chenopodium quinoa HOM05D010117 ORTHO05D012431 5.7e-08 62.4 57 50.9
Eucgr.H00031 Eucalyptus grandis HOM05D003115 ORTHO05D003595 1.3e-07 61.2 66 47.0
CBR_g75372 Chara braunii HOM05D003115 ORTHO05D003595 9.1e-06 55.1 73 39.7


User provided reference genes

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