Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007647 Solanum tuberosum HOM05D000083 ORTHO05D003582 0.0e+00 1281.2 678 100.0
Solyc11g033270.2 Solanum lycopersicum HOM05D000083 ORTHO05D003582 0.0e+00 1260.4 678 98.4
Sopen11g015750 Solanum pennellii HOM05D000083 ORTHO05D003582 0.0e+00 1257.3 678 98.2
CAN.G624.28 Capsicum annuum HOM05D000083 ORTHO05D003582 0.0e+00 1209.5 685 94.7
Peaxi162Scf01172g00034 Petunia axillaris HOM05D000083 ORTHO05D003582 0.0e+00 1158.3 694 90.9
Nitab4.5_0002113g0210 Nicotiana tabacum HOM05D000083 ORTHO05D003582 0.0e+00 1095.9 676 88.9
Peaxi162Scf00363g00731 Petunia axillaris HOM05D000083 ORTHO05D003582 1.9e-308 1062.0 693 82.8
Dinv11712 Davidia involucrata HOM05D000083 ORTHO05D003582 4.0e-306 1054.3 697 79.2
Rhsim09G0073200 Rhododendron simsii HOM05D000083 ORTHO05D003582 6.4e-296 1020.4 694 77.1
Cc00_g03930 Coffea canephora HOM05D000083 ORTHO05D003582 3.5e-294 1014.6 697 77.0
Lj3C850G18 Lonicera japonica HOM05D000083 ORTHO05D003582 2.9e-288 995.0 697 75.9
Oeu027907.6 Olea europaea HOM05D000083 ORTHO05D003582 1.6e-286 989.2 679 79.5
SalBow6G1016 Salvia bowleyana HOM05D000083 ORTHO05D003582 4.6e-286 987.6 731 72.4
Migut.E00701 Erythranthe guttata HOM05D000083 ORTHO05D003582 3.3e-284 981.5 679 75.7
Thecc.02G160900 Theobroma cacao HOM05D000083 ORTHO05D003582 6.2e-283 977.2 704 74.3
Ciclev10030510m.g Citrus clementina HOM05D000083 ORTHO05D003582 1.0e-277 959.9 704 73.7
Potri.005G094200 Populus trichocarpa HOM05D000083 ORTHO05D003582 1.3e-277 959.5 704 72.4
Prupe.1G346000 Prunus persica HOM05D000083 ORTHO05D003582 6.7e-277 957.2 690 75.1
Duzib132G0002 Durio zibethinus HOM05D000083 ORTHO05D003582 4.3e-276 954.5 704 73.2
DCAR_030398 Daucus carota HOM05D000083 ORTHO05D003582 2.1e-275 952.2 683 74.1
SGA_v2.0_scaffold99G29461 Striga asiatica HOM05D000083 ORTHO05D003582 4.8e-275 951.0 727 71.3
GSVIVG01012031001 Vitis vinifera HOM05D000083 ORTHO05D003582 9.0e-274 946.8 689 74.3
Haze_11721 Corylus avellana HOM05D000083 ORTHO05D003582 5.8e-273 944.1 717 72.5
ECA246G2960 Erigeron canadensis HOM05D000083 ORTHO05D003582 1.0e-272 943.3 680 74.7
Nn7g37822 Nelumbo nucifera HOM05D000083 ORTHO05D003582 2.9e-272 941.8 688 73.4
FAN07G1039 Fragaria x ananassa HOM05D000083 ORTHO05D003582 3.8e-272 941.4 690 73.8
Potri.007G070100 Populus trichocarpa HOM05D000083 ORTHO05D003582 6.5e-272 940.6 705 72.2
FvH4_4g36790 Fragaria vesca HOM05D000083 ORTHO05D003582 8.4e-272 940.3 696 73.6
MD16G1000900 Malus domestica HOM05D000083 ORTHO05D003582 1.1e-271 939.9 690 73.2
TWI53G2094 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 1.4e-271 939.5 703 72.7
Duzib248G1611 Durio zibethinus HOM05D000083 ORTHO05D003582 1.9e-271 939.1 704 71.7
HanXRQChr17g0540841 Helianthus annuus HOM05D000083 ORTHO05D003582 2.5e-271 938.7 680 74.1
RcHm_v2.0_Chr4g0446521 Rosa chinensis HOM05D000083 ORTHO05D003582 9.3e-271 936.8 690 73.6
Manes.11G101900 Manihot esculenta HOM05D000083 ORTHO05D003582 1.6e-270 936.0 698 72.1
HanXRQChr06g0172001 Helianthus annuus HOM05D000083 ORTHO05D003582 2.7e-270 935.3 679 74.1
MD13G1006900 Malus domestica HOM05D000083 ORTHO05D003582 2.7e-270 935.3 690 73.3
FAN12G3263 Fragaria x ananassa HOM05D000083 ORTHO05D003582 1.8e-269 932.6 705 72.6
Gohir.A03G164300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.5e-268 929.5 703 71.3
Aqoxy7G03614 Aquilegia oxysepala HOM05D000083 ORTHO05D003582 7.4e-268 927.2 701 72.5
QL03p043964 Quercus lobata HOM05D000083 ORTHO05D003582 1.6e-267 926.0 704 72.3
Gorai.005G210100 Gossypium raimondii HOM05D000083 ORTHO05D003582 6.3e-267 924.1 704 71.4
TWI74G1512 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 6.3e-267 924.1 703 72.0
Gohir.D02G187600 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.1e-266 923.3 704 71.4
CsaV3_3G031470 Cucumis sativus L. HOM05D000083 ORTHO05D003582 3.8e-264 914.8 705 70.9
THA.LOC104822679 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 3.8e-264 914.8 688 73.0
TAR629G3380 Trochodendron aralioides HOM05D000083 ORTHO05D003582 3.8e-264 914.8 684 72.5
FAN17G2779 Fragaria x ananassa HOM05D000083 ORTHO05D003582 3.2e-263 911.8 736 69.3
CiPaw.04G139600 Carya illinoinensis HOM05D000083 ORTHO05D003582 1.6e-262 909.4 702 71.7
MELO3C024030.2 Cucumis melo HOM05D000083 ORTHO05D003582 3.6e-262 908.3 708 70.3
Sabra07G0058700 Salix brachista HOM05D000083 ORTHO05D003582 4.6e-262 907.9 705 70.1
TAR371G0617 Trochodendron aralioides HOM05D000083 ORTHO05D003582 1.4e-261 906.4 762 66.5
Ah.01g012890 Amaranthus hybridus HOM05D000083 ORTHO05D003582 5.7e-260 901.0 685 72.3
EL10Ac9g22930 Beta vulgaris HOM05D000083 ORTHO05D003582 1.3e-259 899.8 683 74.8
ClCG10G011890 Citrullus lanatus HOM05D000083 ORTHO05D003582 6.3e-259 897.5 741 67.3
Sabra05G0078000 Salix brachista HOM05D000083 ORTHO05D003582 9.1e-258 893.6 813 62.0
Sed0020503 Sechium edule HOM05D000083 ORTHO05D003582 9.1e-258 893.6 700 70.3
AUR62015218 Chenopodium quinoa HOM05D000083 ORTHO05D003582 3.4e-257 891.7 685 71.2
Lj3g0012190 Lotus japonicus HOM05D000083 ORTHO05D003582 7.7e-257 890.6 687 70.3
Gohir.A01G013000 Gossypium hirsutum HOM05D000083 ORTHO05D003582 8.5e-256 887.1 690 71.3
Gohir.A12G134300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 2.5e-255 885.6 704 69.0
Ca_19030_v3 Cicer arietinum L. HOM05D000083 ORTHO05D003582 9.4e-255 883.6 688 70.5
Gorai.008G149400 Gossypium raimondii HOM05D000083 ORTHO05D003582 1.2e-254 883.2 704 68.3
Gohir.D01G014300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.8e-253 879.4 690 70.9
Gorai.002G016000 Gossypium raimondii HOM05D000083 ORTHO05D003582 3.0e-253 878.6 690 70.9
DCAR_023443 Daucus carota HOM05D000083 ORTHO05D003582 1.1e-252 876.7 681 68.1
unitig_22.g5627 Utricularia gibba HOM05D000083 ORTHO05D003582 1.5e-252 876.3 680 70.4
CANSAT64G2172 Cannabis sativa HOM05D000083 ORTHO05D003582 2.0e-252 875.9 694 69.2
Psat7g176440 Pisum sativum HOM05D000083 ORTHO05D003582 2.0e-252 875.9 690 70.0
Glyma.12G027600 Glycine max HOM05D000083 ORTHO05D003582 4.4e-252 874.8 682 69.9
Glyma.11G101700 Glycine max HOM05D000083 ORTHO05D003582 3.7e-251 871.7 682 69.6
Carub.0003s1301 Capsella rubella HOM05D000083 ORTHO05D003582 1.1e-250 870.2 692 70.2
PSO063G5474 Papaver somniferum HOM05D000083 ORTHO05D003582 1.4e-250 869.8 699 69.4
CARHR088200 Cardamine hirsuta HOM05D000083 ORTHO05D003582 3.1e-250 868.6 692 70.5
PSO782G1916 Papaver somniferum HOM05D000083 ORTHO05D003582 5.3e-250 867.8 699 69.1
Medtr4g074875 Medicago truncatula HOM05D000083 ORTHO05D003582 1.6e-249 866.3 686 69.0
Medtr4g075410 Medicago truncatula HOM05D000083 ORTHO05D003582 1.6e-249 866.3 691 69.6
AL3G25440 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 7.7e-249 864.0 686 70.6
PGR044G0594 Punica granatum HOM05D000083 ORTHO05D003582 2.2e-248 862.4 685 68.6
Thhalv10019926m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 3.8e-248 861.7 687 70.5
Lsat_1_v5_gn_3_33541 Lactuca sativa HOM05D000083 ORTHO05D003582 6.5e-248 860.9 691 69.6
AUR62017682 Chenopodium quinoa HOM05D000083 ORTHO05D003582 1.1e-247 860.1 668 70.4
AT3G13530 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 2.5e-247 859.0 693 69.6
Phvul.011G030800 Phaseolus vulgaris HOM05D000083 ORTHO05D003582 2.5e-247 859.0 685 68.9
Aa31LG10G1090 Aethionema arabicum HOM05D000083 ORTHO05D003582 5.5e-247 857.8 685 69.8
VMungo1383G1323 Vigna mungo HOM05D000083 ORTHO05D003582 5.5e-247 857.8 688 68.2
Lalb_Chr19g0139361 Lupinus albus HOM05D000083 ORTHO05D003582 2.1e-246 855.9 692 68.9
Sp3g11740 Schrenkiella parvula HOM05D000083 ORTHO05D003582 2.1e-246 855.9 693 71.9
Eucgr.J00858 Eucalyptus grandis HOM05D000083 ORTHO05D003582 4.7e-246 854.7 688 68.3
A03p38250 Brassica napus HOM05D000083 ORTHO05D003582 1.8e-245 852.8 681 72.2
BraA03t12978Z Brassica rapa HOM05D000083 ORTHO05D003582 1.8e-245 852.8 684 71.9
Thhalv10019902m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 6.7e-245 850.9 684 69.2
BcaB04g18769 Brassica carinata HOM05D000083 ORTHO05D003582 1.1e-244 850.1 682 69.9
vmacro10904 Vaccinium macrocarpon HOM05D000083 ORTHO05D003582 2.2e-243 845.9 597 74.2
BcaC01g03989 Brassica carinata HOM05D000083 ORTHO05D003582 6.3e-243 844.3 684 71.2
Aa31LG8G730 Aethionema arabicum HOM05D000083 ORTHO05D003582 1.2e-241 840.1 677 70.3
BolC3t16908H Brassica oleracea HOM05D000083 ORTHO05D003582 1.2e-241 840.1 684 68.7
C03p46440 Brassica napus HOM05D000083 ORTHO05D003582 2.7e-241 839.0 684 68.6
arahy.Tifrunner.gnm1.ann1.FSDW2L Arachis hypogaea HOM05D000083 ORTHO05D003582 3.8e-240 835.1 681 67.4
MSTRG.2058 Avicennia marina HOM05D000083 ORTHO05D003582 4.2e-239 831.6 635 69.8
ATR0326G043 Amborella trichopoda HOM05D000083 ORTHO05D003582 5.5e-239 831.2 715 65.0
Gohir.D12G137900 Gossypium hirsutum HOM05D000083 ORTHO05D003582 7.2e-239 830.9 704 65.8
THA.LOC104810328 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 1.2e-238 830.1 684 67.7
Sp3g06890 Schrenkiella parvula HOM05D000083 ORTHO05D003582 2.1e-238 829.3 683 67.9
arahy.Tifrunner.gnm1.ann1.ZIJB47 Arachis hypogaea HOM05D000083 ORTHO05D003582 2.7e-238 828.9 680 66.3
Carub.0003s0756 Capsella rubella HOM05D000083 ORTHO05D003582 3.0e-237 825.5 681 67.8
Ah.01g001600 Amaranthus hybridus HOM05D000083 ORTHO05D003582 6.8e-237 824.3 702 65.5
AT3G07980 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 1.2e-236 823.5 681 67.1
AL3G19360 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 3.7e-227 792.0 681 65.6
CDE04G1078 Ceratophyllum demersum HOM05D000083 ORTHO05D003582 9.2e-226 787.3 686 64.6
Hund24289 Selenicereus undatus HOM05D000083 ORTHO05D003582 4.7e-222 775.0 682 64.8
DCAR_004230 Daucus carota HOM05D000083 ORTHO05D003582 2.9e-219 765.8 679 64.2
Sabra07G0058200 Salix brachista HOM05D000083 ORTHO05D003582 2.9e-219 765.8 684 63.0
CARHR082720 Cardamine hirsuta HOM05D000083 ORTHO05D003582 3.2e-218 762.3 682 63.5
TPR.G32329 Trifolium pratense HOM05D000083 ORTHO05D003582 7.0e-218 761.1 564 72.5
Os04g0660500 Oryza sativa ssp. japonica HOM05D000083 ORTHO05D003582 2.0e-217 759.6 684 63.2
A03p35590 Brassica napus HOM05D000083 ORTHO05D003582 2.3e-213 746.1 682 62.8
Zm00001eb067530 Zea mays HOM05D000083 ORTHO05D003582 2.3e-213 746.1 682 62.0
C03p43230 Brassica napus HOM05D000083 ORTHO05D003582 3.1e-213 745.7 682 62.9
BolC3t16592H Brassica oleracea HOM05D000083 ORTHO05D003582 2.0e-212 743.0 682 63.2
BraA03t12735Z Brassica rapa HOM05D000083 ORTHO05D003582 8.3e-211 737.6 682 62.6
Zm00001eb432730 Zea mays HOM05D000083 ORTHO05D003582 1.1e-210 737.3 682 61.6
Oeu033540.1 Olea europaea HOM05D000083 ORTHO05D003582 1.5e-204 716.8 525 76.2
Sc06g0007920 Simmondsia chinensis HOM05D000083 ORTHO05D003582 4.1e-202 708.8 595 64.5
HPP92_002088 Vanilla planifolia HOM05D000083 ORTHO05D003582 1.6e-198 696.8 478 76.6
HPP92_002093 Vanilla planifolia HOM05D000083 ORTHO05D003582 7.3e-191 671.4 651 59.9
SEGI_09729 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 2.2e-179 633.3 708 57.3
BcaB03g11558 Brassica carinata HOM05D000083 ORTHO05D003582 7.6e-172 608.2 654 56.3
SHI17990 Sapria himalayana HOM05D000083 ORTHO05D003582 1.6e-169 600.5 409 75.3
A01p40080 Brassica napus HOM05D000083 ORTHO05D003582 4.6e-169 599.0 679 54.2
SMO198G0032 Selaginella moellendorffii HOM05D000083 ORTHO05D003582 4.6e-169 599.0 696 52.7
BraA01t04049Z Brassica rapa HOM05D000083 ORTHO05D003582 7.9e-169 598.2 679 54.1
BcaB03g11553 Brassica carinata HOM05D000083 ORTHO05D003582 3.3e-167 592.8 678 54.0
BolC1t05099H Brassica oleracea HOM05D000083 ORTHO05D003582 2.8e-166 589.7 679 53.6
Lalb_Chr10g0095051 Lupinus albus HOM05D000083 ORTHO05D003582 8.1e-166 588.2 601 57.6
BcaB04g20987 Brassica carinata HOM05D000083 ORTHO05D003582 5.3e-165 585.5 679 53.2
C01p51560 Brassica napus HOM05D000083 ORTHO05D003582 5.3e-165 585.5 679 53.2
Mapoly0140s0044 Marchantia polymorpha HOM05D000083 ORTHO05D003582 2.2e-163 580.1 735 49.3
DCAR_026911 Daucus carota HOM05D000083 ORTHO05D003582 1.8e-149 533.9 348 76.7
Pp3c15_11760 Physcomitrium patens HOM05D000083 ORTHO05D003582 3.4e-148 529.6 689 47.5
Atru.chr11.1178 Acer truncatum HOM05D000083 ORTHO05D003582 1.4e-146 524.2 462 64.3
Pp3c15_25040 Physcomitrium patens HOM05D000083 ORTHO05D003582 7.2e-146 521.9 719 47.0
Pp3c9_25590 Physcomitrium patens HOM05D000083 ORTHO05D003582 2.0e-143 513.8 693 46.6
Hma1.2p1_0005F.1_g004230 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 4.1e-141 506.1 544 56.1
Cpa.g.sc119.48 Carica papaya HOM05D000083 ORTHO05D003582 3.8e-139 499.6 457 63.0
SEGI_08600 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 1.7e-134 484.2 661 46.7
Lalb_Chr03g0024821 Lupinus albus HOM05D000083 ORTHO05D003582 2.8e-134 483.4 459 62.5
Nitab4.5_0011898g0010 Nicotiana tabacum HOM05D000083 ORTHO05D003582 5.3e-125 452.6 231 99.1
Lalb_Chr03g0024811 Lupinus albus HOM05D000083 ORTHO05D003582 1.7e-110 404.4 233 86.7
CBR_g38927 Chara braunii HOM05D000083 ORTHO05D003582 1.8e-104 384.4 679 39.5
Atru.chr11.1179 Acer truncatum HOM05D000083 ORTHO05D003582 2.3e-99 367.5 201 92.0
BcaB03g11561 Brassica carinata HOM05D000083 ORTHO05D003582 3.4e-95 353.6 450 50.2
COL.COLO4_08996 Corchorus olitorius HOM05D000083 ORTHO05D003582 1.6e-92 344.7 184 92.9
Cpa.g.sc119.47 Carica papaya HOM05D000083 ORTHO05D003582 4.6e-92 343.2 185 94.1
BcaB03g11559 Brassica carinata HOM05D000083 ORTHO05D003582 3.6e-81 307.0 649 38.2
PRCOL_00002034 Prasinoderma coloniale HOM05D000083 ORTHO05D003582 2.9e-78 297.4 312 50.6
Sed0024928 Sechium edule HOM05D000083 ORTHO05D003582 4.6e-76 290.0 359 51.3
HPP92_002070 Vanilla planifolia HOM05D000083 ORTHO05D003582 1.7e-70 271.6 185 78.4
A05p35920 Brassica napus HOM05D000083 ORTHO05D003582 2.8e-65 254.2 172 76.2
BraA05t22398Z Brassica rapa HOM05D000083 ORTHO05D003582 2.8e-65 254.2 172 76.2
Oeu057598.1 Olea europaea HOM05D000083 ORTHO05D003582 1.1e-56 225.7 237 55.7
Oeu023128.1 Olea europaea HOM05D000083 ORTHO05D003582 1.1e-50 205.7 220 54.5
Oeu007541.1 Olea europaea HOM05D000083 ORTHO05D003582 1.6e-49 201.8 228 52.2
Actinidia04075 Actinidia chinensis HOM05D000083 ORTHO05D003582 2.2e-46 191.4 104 94.2
Oeu023129.1 Olea europaea HOM05D000083 ORTHO05D003582 2.9e-46 191.0 188 56.4
CBR_g66805 Chara braunii HOM05D000083 ORTHO05D003582 1.9e-45 188.3 200 50.5
C05p54340 Brassica napus HOM05D000083 ORTHO05D003582 7.4e-42 176.4 136 72.1
BolC5t34102H Brassica oleracea HOM05D000083 ORTHO05D003582 7.4e-42 176.4 136 72.1
SHI17994 Sapria himalayana HOM05D000083 ORTHO05D003582 3.7e-41 174.1 286 44.1
AagrBONN_evm.TU.Sc2ySwM_344.4764 Anthoceros agrestis HOM05D000083 ORTHO05D003582 1.4e-37 162.2 119 67.2
Cfa022394 Carpinus fangiana HOM05D000083 ORTHO05D003582 4.1e-32 144.1 328 32.0
HPP92_002069 Vanilla planifolia HOM05D000083 ORTHO05D003582 3.8e-30 137.5 180 46.1
Zm00001eb339770 Zea mays HOM05D000083 ORTHO05D003582 6.5e-30 136.7 165 47.3
Oeu042808.3 Olea europaea HOM05D000083 ORTHO05D290297 3.1e-24 117.9 166 47.6
Cre01.g016570 Chlamydomonas reinhardtii HOM05D000083 ORTHO05D003582 1.3e-22 112.5 429 26.3
Zm00001eb134900 Zea mays HOM05D000083 ORTHO05D003582 3.1e-16 91.3 67 67.2
Oeu043479.1 Olea europaea HOM05D001851 ORTHO05D002237 7.2e-13 80.1 54 72.2
MCO05G550 Micromonas commoda HOM05D000083 ORTHO05D003582 5.2e-11 73.9 307 26.7
Sabra02G0104200 Salix brachista HOM05D000994 ORTHO05D000817 1.6e-07 62.4 66 53.0


User provided reference genes

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