Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.7e-175 618.2 338 100.0
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 8.2e-159 563.9 296 92.9
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.4e-158 563.1 296 92.9
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.4e-150 536.6 297 87.9
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 8.5e-148 527.3 301 85.7
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 4.0e-145 518.5 294 86.4
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 7.7e-141 504.2 289 85.8
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 3.6e-122 442.2 309 69.3
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.5e-120 436.8 291 72.5
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.6e-120 436.0 297 71.4
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 4.4e-120 435.3 292 70.9
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 5.7e-120 434.9 302 68.5
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 5.7e-120 434.9 300 69.7
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 7.5e-120 434.5 309 68.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 7.5e-120 434.5 302 67.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.3e-119 433.7 300 68.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 2.2e-119 433.0 299 67.2
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.1e-118 430.6 304 68.8
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.1e-118 430.6 312 68.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.4e-118 430.3 299 67.2
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 2.7e-117 426.0 301 65.8
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 7.8e-117 424.5 311 66.2
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 5.0e-116 421.8 303 65.3
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 8.6e-116 421.0 311 65.6
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.5e-115 420.2 307 66.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.9e-115 419.9 303 65.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.5e-115 419.5 307 66.1
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 3.3e-115 419.1 304 66.1
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 7.3e-115 417.9 298 67.4
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.2e-114 417.2 299 66.9
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.6e-114 416.8 312 63.8
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.1e-114 416.4 301 66.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 3.6e-114 415.6 298 67.8
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 4.7e-114 415.2 293 67.6
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.8e-113 413.3 292 66.1
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 3.1e-113 412.5 306 65.0
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 5.2e-113 411.8 315 64.8
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.2e-113 411.8 289 68.2
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 5.2e-113 411.8 298 64.4
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 6.8e-113 411.4 300 66.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.5e-112 410.2 305 63.6
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.0e-112 409.8 312 64.1
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 2.6e-112 409.5 307 64.8
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 3.4e-112 409.1 301 63.8
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 4.4e-112 408.7 298 65.1
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 5.8e-112 408.3 302 65.6
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.5e-112 407.9 303 64.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 9.8e-112 407.5 300 64.0
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.8e-112 407.5 302 63.6
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 9.8e-112 407.5 301 66.1
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.9e-111 406.0 297 64.0
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 3.7e-111 405.6 299 66.2
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 4.9e-111 405.2 298 66.8
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 6.4e-111 404.8 300 64.7
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 6.4e-111 404.8 299 65.9
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 6.4e-111 404.8 296 64.9
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.1e-110 404.1 323 63.2
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 4.1e-110 402.1 297 63.3
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 9.2e-110 401.0 297 64.0
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.2e-109 400.6 297 63.0
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.0e-109 399.8 308 63.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.7e-109 399.4 307 62.9
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.5e-109 399.1 300 63.7
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.6e-109 398.7 295 62.7
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 4.6e-109 398.7 297 64.3
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.7e-108 396.7 304 62.2
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 5.0e-108 395.2 307 61.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.0e-108 395.2 298 64.1
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 8.6e-108 394.4 308 61.7
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.1e-107 394.0 297 63.0
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.2e-106 390.6 296 62.2
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 3.6e-106 389.0 296 65.2
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 4.0e-105 385.6 308 62.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.2e-104 384.0 318 61.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.5e-104 381.3 269 68.4
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 2.2e-103 379.8 297 62.6
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 4.9e-103 378.6 271 67.2
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.4e-102 375.2 285 62.1
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 2.1e-101 373.2 303 61.1
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.7e-101 372.9 303 61.1
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 3.5e-101 372.5 307 60.3
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 4.6e-101 372.1 307 60.3
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.3e-100 369.8 311 59.5
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.9e-100 369.0 293 62.8
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.6e-100 368.2 265 66.8
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.1e-99 367.5 246 72.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.6e-98 363.6 281 63.0
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 2.1e-98 363.2 215 77.7
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 8.1e-98 361.3 276 64.9
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 8.1e-98 361.3 308 59.1
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.8e-97 360.1 303 57.4
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 6.8e-97 358.2 309 59.2
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 6.8e-97 358.2 309 59.2
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.4e-96 355.9 224 87.1
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.4e-94 350.5 267 60.7
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.5e-93 345.9 313 58.1
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 4.3e-91 339.0 315 55.9
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 5.8e-88 328.6 231 63.6
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.7e-87 327.0 252 65.1
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 3.9e-84 315.8 299 52.2
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.4e-73 280.8 206 66.0
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.1e-69 266.9 303 46.9
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.3e-68 264.2 183 72.7
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 5.1e-68 262.3 341 40.5
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.3e-66 257.7 298 43.6
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.2e-66 255.0 283 45.6
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.5e-64 250.8 280 45.4
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.0e-63 248.1 210 57.1
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.7e-63 247.3 177 68.9
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 2.5e-59 233.4 298 43.3
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 3.2e-54 216.5 233 44.2
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.2e-45 188.0 305 37.4
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.6e-45 187.6 273 39.6
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.3e-42 177.9 158 52.5
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.6e-35 153.7 135 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 3.6e-29 133.3 114 52.6
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.7e-23 114.4 108 54.6
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 2.7e-16 90.5 123 43.1
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 4.5e-16 89.7 112 49.1
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 5.7e-11 72.8 41 78.0
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.7e-07 61.2 33 78.8


User provided reference genes

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