Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.6e-132 476.1 240 100.0
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 4.7e-100 368.2 219 88.1
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.9e-80 303.1 228 72.8
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.3e-77 292.4 228 71.9
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.2e-76 290.4 228 72.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 5.6e-53 211.8 174 69.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 2.6e-50 203.0 194 58.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 5.8e-50 201.8 222 54.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.9e-48 196.8 170 61.8
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.2e-48 195.7 214 53.7
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.4e-48 195.3 196 57.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 7.1e-48 194.9 217 51.6
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 1.2e-47 194.1 225 51.6
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.1e-47 193.4 196 57.1
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 3.5e-47 192.6 220 52.3
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 4.6e-47 192.2 228 50.4
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.0e-46 191.0 218 52.3
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.3e-46 189.9 200 53.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 6.7e-46 188.3 178 61.2
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.5e-45 187.2 233 49.4
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.9e-45 186.8 141 67.4
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.9e-45 186.8 120 78.3
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 4.3e-45 185.7 168 61.3
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.6e-44 183.7 205 53.2
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.6e-44 183.7 171 60.8
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.1e-44 183.3 120 75.0
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.1e-44 183.3 120 75.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.7e-44 182.6 159 64.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 3.7e-44 182.6 170 59.4
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.8e-44 182.2 211 52.1
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 6.2e-44 181.8 211 53.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 6.2e-44 181.8 140 66.4
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.1e-43 181.0 205 53.7
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.4e-43 180.6 226 49.6
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.4e-43 180.6 151 61.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.8e-43 180.3 198 52.5
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.8e-43 180.3 231 50.2
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.0e-43 179.1 219 50.7
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 6.9e-43 178.3 145 64.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 6.9e-43 178.3 234 47.4
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 9.0e-43 177.9 228 50.0
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 9.0e-43 177.9 180 55.6
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 9.0e-43 177.9 204 53.9
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 9.0e-43 177.9 173 56.1
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.5e-42 177.2 205 52.7
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.0e-42 176.8 217 50.7
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.0e-42 176.8 167 57.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.6e-42 176.4 198 54.0
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.6e-42 176.4 172 55.2
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.4e-42 176.0 230 50.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 4.5e-42 175.6 198 51.5
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 4.5e-42 175.6 200 52.5
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 4.5e-42 175.6 140 62.1
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 7.6e-42 174.9 205 52.2
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.6e-42 174.9 171 56.1
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.6e-42 174.9 139 64.0
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.3e-41 174.1 195 51.3
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.3e-41 174.1 192 54.7
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.7e-41 173.7 144 63.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.7e-41 173.7 144 63.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.7e-41 173.7 186 53.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.2e-41 173.3 189 52.9
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 2.2e-41 173.3 194 50.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 2.9e-41 172.9 200 52.5
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.9e-41 172.9 200 52.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.8e-41 172.6 145 61.4
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 3.8e-41 172.6 145 62.1
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 3.8e-41 172.6 131 70.2
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 4.9e-41 172.2 128 66.4
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 8.4e-41 171.4 210 50.0
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.4e-40 170.6 200 49.5
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.4e-40 170.6 195 55.4
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.9e-40 170.2 200 51.0
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.2e-40 169.5 206 49.5
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 3.2e-40 169.5 202 48.5
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 4.2e-40 169.1 192 53.1
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 4.2e-40 169.1 211 48.8
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.6e-39 167.2 118 72.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.7e-39 166.4 156 57.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.5e-39 166.0 156 56.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.6e-39 165.6 269 45.0
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 6.0e-39 165.2 102 81.4
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 6.0e-39 165.2 200 51.5
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.0e-38 162.9 210 49.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 5.1e-38 162.2 196 50.0
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.3e-37 159.1 185 52.4
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 4.8e-36 155.6 121 67.8
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.2e-36 155.2 99 74.7
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.2e-36 154.8 186 53.2
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.2e-36 154.8 177 52.0
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 8.2e-36 154.8 182 51.1
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 5.3e-35 152.1 139 56.8
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.9e-35 151.8 153 52.9
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 6.9e-35 151.8 164 52.4
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-33 147.5 171 55.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.7e-33 147.1 181 50.3
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.2e-33 146.7 171 55.6
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.8e-33 146.0 172 53.5
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 4.9e-33 145.6 118 61.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.4e-32 144.1 146 58.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.5e-32 143.3 141 58.9
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.1e-31 140.2 144 57.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.1e-31 140.2 149 53.0
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 6.0e-31 138.7 130 53.8
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 7.4e-29 131.7 103 64.1
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.3e-27 125.6 104 61.5
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 6.9e-27 125.2 114 52.6
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 9.0e-27 124.8 79 73.4
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 9.0e-27 124.8 114 52.6
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 5.9e-26 122.1 135 55.6
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.0e-22 109.8 153 47.1
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 6.9e-19 98.6 129 47.3
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 4.2e-16 89.4 79 58.2
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 5.5e-16 89.0 124 41.9
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.8e-12 76.6 93 48.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.0e-10 70.5 53 64.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.0e-09 68.2 124 42.7
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.1e-08 64.7 71 47.9
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 5.5e-08 62.4 105 34.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.8e-06 57.4 42 71.4


User provided reference genes

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