Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007475 Solanum tuberosum HOM05D004326 ORTHO05D004570 9.4e-14 79.3 52 100.0
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 1.8e-09 65.1 33 90.9
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 1.8e-09 65.1 33 90.9
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 1.8e-09 65.1 33 90.9
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 1.8e-09 65.1 33 90.9
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 1.8e-09 65.1 33 90.9
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 1.8e-09 65.1 33 90.9
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 4.1e-09 63.9 33 90.9
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 4.1e-09 63.9 33 90.9
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.4e-09 63.5 33 90.9
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 5.4e-09 63.5 33 90.9
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 7.0e-09 63.2 33 87.9
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 7.0e-09 63.2 33 90.9
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.0e-09 63.2 33 87.9
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 7.0e-09 63.2 52 65.4
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 7.0e-09 63.2 35 85.7
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 9.1e-09 62.8 33 87.9
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 9.1e-09 62.8 33 87.9
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.2e-08 62.4 33 87.9
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 1.2e-08 62.4 33 87.9
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.2e-08 62.4 33 87.9
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 1.2e-08 62.4 33 87.9
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 1.6e-08 62.0 33 84.8
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.6e-08 62.0 33 84.8
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 1.6e-08 62.0 33 84.8
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.6e-08 62.0 33 87.9
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 1.6e-08 62.0 35 82.9
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 1.6e-08 62.0 33 87.9
AT3G25717 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 2.0e-08 61.6 35 82.9
A09p24960 Brassica napus HOM05D004326 ORTHO05D004570 2.0e-08 61.6 35 82.9
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 2.0e-08 61.6 33 84.8
BraA09t38084Z Brassica rapa HOM05D004326 ORTHO05D004570 2.0e-08 61.6 35 82.9
Carub.0005s0354 Capsella rubella HOM05D004326 ORTHO05D004570 2.0e-08 61.6 35 82.9
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 2.0e-08 61.6 33 84.8
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.0e-08 61.6 33 84.8
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.7e-08 61.2 33 84.8
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 2.7e-08 61.2 35 82.9
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 3.5e-08 60.8 33 84.8
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 3.5e-08 60.8 33 84.8
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 3.5e-08 60.8 33 90.9
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 3.5e-08 60.8 33 84.8
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 3.5e-08 60.8 33 84.8
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 4.5e-08 60.5 35 77.1
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 4.5e-08 60.5 35 77.1
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 4.5e-08 60.5 35 77.1
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 4.5e-08 60.5 32 87.5
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 4.5e-08 60.5 32 87.5
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 7.7e-08 59.7 31 90.3
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 7.7e-08 59.7 32 78.1
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 7.7e-08 59.7 33 81.8
PGR083G2212 Punica granatum HOM05D004326 ORTHO05D004570 7.7e-08 59.7 35 77.1
A06p42560 Brassica napus HOM05D004326 ORTHO05D004570 1.0e-07 59.3 35 77.1
BraA06t27171Z Brassica rapa HOM05D004326 ORTHO05D004570 1.0e-07 59.3 35 77.1
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 1.0e-07 59.3 33 81.8
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 1.3e-07 58.9 32 84.4
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 2.2e-07 58.2 33 81.8
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.2e-07 58.2 31 83.9
AL2G27790 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 2.9e-07 57.8 31 83.9
AT1G68825 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 2.9e-07 57.8 31 83.9
C06p37300 Brassica napus HOM05D004326 ORTHO05D004570 2.9e-07 57.8 31 83.9
Migut.L01097 Erythranthe guttata HOM05D004326 ORTHO05D004570 2.9e-07 57.8 52 59.6
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 2.9e-07 57.8 31 83.9
ClCG03G009910 Citrullus lanatus HOM05D004326 ORTHO05D004570 3.8e-07 57.4 31 83.9
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 3.8e-07 57.4 31 83.9
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 3.8e-07 57.4 31 83.9
Migut.H00527 Erythranthe guttata HOM05D004326 ORTHO05D004570 5.0e-07 57.0 35 71.4
Carub.0002s1541 Capsella rubella HOM05D004326 ORTHO05D004570 6.5e-07 56.6 31 80.6
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 6.5e-07 56.6 32 75.0
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 8.5e-07 56.2 35 71.4
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 8.5e-07 56.2 30 80.0
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 1.1e-06 55.8 35 71.4
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 1.1e-06 55.8 32 78.1
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 1.1e-06 55.8 35 71.4
THA.LOC109117025 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.9e-06 55.1 31 77.4
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 2.5e-06 54.7 31 83.9
BolC7t43991H Brassica oleracea HOM05D004326 ORTHO05D004570 3.2e-06 54.3 35 71.4
CAN.G497.3 Capsicum annuum HOM05D004326 ORTHO05D004570 4.2e-06 53.9 35 71.4
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 4.2e-06 53.9 33 72.7
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 4.2e-06 53.9 33 72.7
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 4.2e-06 53.9 33 72.7
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 4.2e-06 53.9 35 71.4
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 5.5e-06 53.5 33 75.8
THA.LOC109116378 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 5.5e-06 53.5 35 68.6
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 7.2e-06 53.1 35 71.4
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 7.2e-06 53.1 35 68.6
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.2e-06 53.1 35 68.6
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.2e-06 53.1 35 68.6
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 7.2e-06 53.1 35 68.6
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 7.2e-06 53.1 32 71.9
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 7.2e-06 53.1 35 68.6
PSO063G2252 Papaver somniferum HOM05D004326 ORTHO05D004570 9.5e-06 52.8 31 80.6


User provided reference genes

Program Settings