Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007440 Solanum tuberosum HOM05D009695 ORTHO05D007271 2.6e-46 188.3 94 100.0
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 8.8e-10 67.0 64 57.8
COL.COLO4_10198 Corchorus olitorius HOM05D009695 ORTHO05D007271 1.1e-09 66.6 58 60.3
Carub.0005s2144 Capsella rubella HOM05D009695 ORTHO05D007271 5.7e-09 64.3 101 38.6
CiPaw.02G172600 Carya illinoinensis HOM05D019773 ORTHO05D007271 1.7e-08 62.8 49 57.1
Prupe.2G209700 Prunus persica HOM05D019773 ORTHO05D007271 1.7e-08 62.8 46 58.7
DCAR_019088 Daucus carota HOM05D009695 ORTHO05D007271 2.2e-08 62.4 73 47.9
Manes.10G049800 Manihot esculenta HOM05D009695 ORTHO05D007271 2.2e-08 62.4 92 40.2
Cc02_g11000 Coffea canephora HOM05D009695 ORTHO05D007271 4.8e-08 61.2 108 40.7
Thhalv10011102m.g Eutrema salsugineum HOM05D009695 ORTHO05D007271 4.8e-08 61.2 53 56.6
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 8.2e-08 60.5 100 38.0
BcaC07g39776 Brassica carinata HOM05D009695 ORTHO05D007271 1.1e-07 60.1 100 39.0
A09p47770 Brassica napus HOM05D009695 ORTHO05D007271 1.1e-07 60.1 100 39.0
C08p30020 Brassica napus HOM05D009695 ORTHO05D007271 1.1e-07 60.1 100 39.0
BolC8t50611H Brassica oleracea HOM05D009695 ORTHO05D007271 1.1e-07 60.1 100 39.0
Psat6g181720 Pisum sativum HOM05D007861 ORTHO05D007271 1.1e-07 60.1 63 54.0
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 1.4e-07 59.7 77 45.5
Glyma.10G208600 Glycine max HOM05D007861 ORTHO05D007271 2.4e-07 58.9 51 66.7
Manes.07G095300 Manihot esculenta HOM05D009695 ORTHO05D007271 2.4e-07 58.9 97 39.2
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 2.4e-07 58.9 68 45.6
Thecc.10G081700 Theobroma cacao HOM05D009695 ORTHO05D007271 2.4e-07 58.9 54 55.6
BcaB01g00155 Brassica carinata HOM05D009695 ORTHO05D007271 9.1e-07 57.0 100 38.0
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 9.1e-07 57.0 74 43.2
Glyma.20G182100 Glycine max HOM05D007861 ORTHO05D007271 9.1e-07 57.0 51 62.7
Gohir.A05G294400 Gossypium hirsutum HOM05D009695 ORTHO05D007271 9.1e-07 57.0 106 38.7
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 1.2e-06 56.6 105 34.3
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 1.2e-06 56.6 74 43.2
Medtr1g094250 Medicago truncatula HOM05D007861 ORTHO05D007271 1.2e-06 56.6 52 59.6
AL5G35930 Arabidopsis lyrata HOM05D009695 ORTHO05D007271 2.0e-06 55.8 96 40.6
Sabra10G0174600 Salix brachista HOM05D007861 ORTHO05D007271 2.0e-06 55.8 70 44.3
Lalb_Chr02g0152111 Lupinus albus HOM05D007861 ORTHO05D007271 2.6e-06 55.5 73 43.8
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 2.6e-06 55.5 98 35.7
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 2.6e-06 55.5 54 51.9
Cpa.g.sc53.122 Carica papaya HOM05D009695 ORTHO05D007271 3.4e-06 55.1 90 43.3
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 3.4e-06 55.1 106 37.7
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 4.5e-06 54.7 73 42.5
CARHR164810 Cardamine hirsuta HOM05D009695 ORTHO05D007271 7.7e-06 53.9 98 36.7
RcHm_v2.0_Chr1g0362761 Rosa chinensis HOM05D019773 ORTHO05D007271 7.7e-06 53.9 52 53.8


User provided reference genes

Program Settings