Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.5e-155 552.7 274 100.0
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.1e-81 307.4 217 72.4
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 5.6e-81 305.1 284 63.4
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.4e-79 300.4 285 62.1
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 6.8e-79 298.1 284 61.3
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.0e-78 296.6 284 61.6
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.7e-72 275.4 289 55.0
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.2e-72 275.0 289 56.7
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.9e-65 253.4 288 51.7
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.5e-62 243.8 278 51.4
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.8e-61 239.2 282 51.8
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.4e-60 237.3 279 51.3
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 9.2e-60 234.6 203 60.1
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.2e-59 234.2 263 53.2
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 5.6e-57 225.3 242 52.9
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.1e-56 223.4 199 59.3
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 4.7e-56 222.2 192 60.4
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 6.9e-55 218.4 229 54.6
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.2e-54 217.6 193 58.5
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.2e-54 217.6 230 52.2
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.5e-54 217.2 217 56.2
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.5e-54 217.2 193 59.6
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.5e-54 217.2 229 53.7
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.0e-54 216.9 217 56.2
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 3.4e-54 216.1 196 55.1
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 5.8e-54 215.3 209 56.0
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 5.8e-54 215.3 191 59.2
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 7.6e-54 214.9 223 53.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.9e-52 210.3 195 59.5
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 3.2e-52 209.5 213 53.1
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 5.4e-52 208.8 195 55.9
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 9.3e-52 208.0 195 59.5
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 9.3e-52 208.0 226 50.4
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 1.2e-51 207.6 194 57.7
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 6.0e-51 205.3 198 57.1
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 6.0e-51 205.3 210 55.2
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 7.8e-51 204.9 192 54.7
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 7.8e-51 204.9 192 54.7
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-50 203.8 203 53.7
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.3e-50 203.4 257 46.3
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.3e-50 203.4 194 57.2
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 3.9e-50 202.6 226 51.8
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 6.6e-50 201.8 225 50.7
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 8.7e-50 201.4 200 54.0
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.1e-49 201.1 192 56.2
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-49 201.1 199 54.3
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-49 201.1 203 53.2
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.1e-49 201.1 192 53.6
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.5e-49 200.7 206 54.4
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.9e-49 200.3 228 50.9
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.5e-49 199.9 199 53.8
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 3.3e-49 199.5 236 50.0
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.3e-49 199.1 246 48.0
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 5.6e-49 198.7 201 55.2
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 7.3e-49 198.4 200 53.5
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 1.3e-48 197.6 209 53.1
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 3.6e-48 196.1 212 49.5
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 3.6e-48 196.1 200 52.5
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 6.2e-48 195.3 230 48.3
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 6.2e-48 195.3 222 49.1
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 8.1e-48 194.9 225 49.3
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 8.1e-48 194.9 222 50.0
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.4e-47 194.1 238 48.3
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.8e-47 193.7 230 48.3
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.4e-47 193.4 223 51.6
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 4.0e-47 192.6 230 50.0
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 9.0e-47 191.4 192 53.6
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 5.8e-46 188.7 192 54.7
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 7.6e-46 188.3 152 59.2
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 9.9e-46 188.0 199 51.8
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 3.8e-45 186.0 222 46.8
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 6.4e-45 185.3 202 50.0
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.1e-44 184.5 194 52.1
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.4e-44 184.1 228 44.3
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.4e-44 184.1 228 44.3
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.4e-44 184.1 233 47.6
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.9e-44 183.7 228 44.3
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 2.4e-44 183.3 222 46.4
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 3.2e-44 183.0 194 50.0
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 3.2e-44 183.0 194 51.0
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 4.2e-44 182.6 256 43.8
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 4.2e-44 182.6 194 49.5
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 5.4e-44 182.2 194 50.0
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.2e-43 181.0 200 49.0
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 2.7e-43 179.9 228 43.4
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 7.9e-43 178.3 226 47.3
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.3e-42 177.6 234 44.9
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 6.7e-42 175.3 145 59.3
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 8.7e-42 174.9 245 43.7
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 8.7e-42 174.9 190 50.5
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.1e-41 174.5 202 48.5
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.5e-41 174.1 144 61.1
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 2.5e-41 173.3 222 44.6
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 5.6e-41 172.2 223 43.5
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 1.6e-40 170.6 233 42.9
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 4.8e-40 169.1 218 43.6
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 3.4e-38 162.9 217 44.2
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 6.4e-37 158.7 196 49.0
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.1e-35 153.7 195 44.6
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.0e-34 151.4 117 63.2
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 3.9e-34 149.4 194 42.8
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.1e-32 143.7 279 38.4
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.3e-29 134.4 135 50.4
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.9e-27 125.2 113 56.6
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.0e-26 124.8 173 41.6
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.8e-24 116.7 112 52.7
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.5e-22 109.4 128 50.0
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 2.9e-21 106.7 195 43.1
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 6.5e-21 105.5 181 39.2
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.1e-20 104.8 130 47.7
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.4e-20 104.4 95 56.8
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 2.3e-18 97.1 126 46.8
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 5.1e-18 95.9 154 39.6
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 6.7e-18 95.5 129 45.0
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-17 93.6 110 40.0
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 5.7e-17 92.4 144 43.8
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.8e-15 87.4 124 46.0
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 6.9e-15 85.5 132 40.9
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.3e-08 64.7 64 51.6
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.1e-07 61.6 66 47.0
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 4.1e-07 59.7 114 36.0


User provided reference genes

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