Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007253 Solanum tuberosum HOM05D000021 ORTHO05D398131 2.6e-83 312.0 159 100.0
Nitab4.5_0028873g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 9.2e-28 127.5 75 85.3
Solyc02g072400.1 Solanum lycopersicum HOM05D000021 ORTHO05D000010 3.9e-26 122.1 75 80.0
Nitab4.5_0001424g0030 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.1e-26 121.7 74 83.8
Sopen02g021350 Solanum pennellii HOM05D000021 ORTHO05D000010 1.1e-25 120.6 75 78.7
PGSC0003DMG400028474 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.9e-25 119.8 75 78.7
Nitab4.5_0000428g0090 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.5e-25 119.4 75 80.0
Nitab4.5_0002300g0040 Nicotiana tabacum HOM05D000021 ORTHO05D000010 7.3e-25 117.9 75 77.3
Nitab4.5_0003736g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.1e-24 116.3 76 78.9
CAN.G411.79 Capsicum annuum HOM05D000021 ORTHO05D000010 3.6e-24 115.5 75 81.3
Nitab4.5_0002185g0120 Nicotiana tabacum HOM05D000021 ORTHO05D000010 4.7e-24 115.2 75 80.0
Nitab4.5_0007564g0040 Nicotiana tabacum HOM05D000021 ORTHO05D000010 7.6e-22 107.8 75 74.7
Nitab4.5_0002185g0130 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.3e-21 107.1 76 71.1
PGSC0003DMG400028473 Solanum tuberosum HOM05D000021 ORTHO05D000010 6.4e-21 104.8 76 73.7
Nitab4.5_0007564g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.1e-19 99.8 76 67.1
Nitab4.5_0002684g0020 Nicotiana tabacum HOM05D000021 ORTHO05D017765 1.5e-17 93.6 73 64.4
Nitab4.5_0002185g0080 Nicotiana tabacum HOM05D000021 ORTHO05D000010 9.9e-14 80.9 55 74.5
Nitab4.5_0002185g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.3e-13 80.5 43 83.7
Solyc02g072440.4 Solanum lycopersicum HOM05D000021 ORTHO05D000010 1.1e-07 60.8 75 44.0
Sopen02g021410 Solanum pennellii HOM05D000021 ORTHO05D000010 1.1e-07 60.8 75 44.0
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 5.3e-07 58.5 31 87.1
Nitab4.5_0002395g0050 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.2e-06 57.4 77 39.0
HPP92_012604 Vanilla planifolia HOM05D000026 ORTHO05D000094 1.5e-06 57.0 76 42.1
Nitab4.5_0001512g0070 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.0e-06 56.6 77 37.7
Nitab4.5_0021718g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.0e-06 56.6 77 39.0
PGSC0003DMG400028435 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.6e-06 56.2 75 44.0
Nitab4.5_0004886g0040 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.4e-06 55.8 77 39.0
Gohir.D01G211100 Gossypium hirsutum HOM05D000026 ORTHO05D000094 4.5e-06 55.5 66 43.9
Gorai.002G256700 Gossypium raimondii HOM05D000026 ORTHO05D000094 4.5e-06 55.5 66 43.9
Sopen02g021420 Solanum pennellii HOM05D000021 ORTHO05D000010 5.8e-06 55.1 75 44.0
Gohir.A01G221701 Gossypium hirsutum HOM05D000026 ORTHO05D000094 7.6e-06 54.7 66 43.9


User provided reference genes

Program Settings