Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007194 Solanum tuberosum HOM05D004052 ORTHO05D004694 8.5e-41 170.2 109 100.0
PGSC0003DMG400027647 Solanum tuberosum HOM05D004052 ORTHO05D004694 1.8e-27 125.9 83 83.1
Solyc07g056650.4 Solanum lycopersicum HOM05D004052 ORTHO05D004694 5.0e-25 117.9 72 86.1
Sopen07g029990 Solanum pennellii HOM05D004052 ORTHO05D004694 5.0e-25 117.9 72 86.1
CAN.G1003.5 Capsicum annuum HOM05D004052 ORTHO05D004694 1.3e-20 103.2 74 77.0
Peaxi162Scf00111g00086 Petunia axillaris HOM05D004052 ORTHO05D004694 1.8e-19 99.4 89 68.5
Nitab4.5_0001662g0050 Nicotiana tabacum HOM05D004052 ORTHO05D004694 2.0e-18 95.9 91 61.5
Nitab4.5_0002495g0040 Nicotiana tabacum HOM05D004052 ORTHO05D004694 3.8e-17 91.7 80 66.2
Oeu001302.1 Olea europaea HOM05D004052 ORTHO05D004694 1.7e-12 76.3 113 44.2
Nitab4.5_0000639g0180 Nicotiana tabacum HOM05D004052 ORTHO05D004694 3.2e-11 72.0 81 54.3
Nitab4.5_0000505g0150 Nicotiana tabacum HOM05D004052 ORTHO05D004694 1.2e-10 70.1 78 56.4
Solyc12g011360.2 Solanum lycopersicum HOM05D004052 ORTHO05D004694 1.6e-10 69.7 81 56.8
PGSC0003DMG400007841 Solanum tuberosum HOM05D004052 ORTHO05D004694 4.6e-10 68.2 81 54.3
Peaxi162Scf00000g00572 Petunia axillaris HOM05D004052 ORTHO05D004694 6.0e-10 67.8 81 53.1
QL04p070259 Quercus lobata HOM05D004052 ORTHO05D004694 1.0e-09 67.0 113 38.9
Actinidia35175 Actinidia chinensis HOM05D004052 ORTHO05D004694 2.3e-09 65.9 79 49.4
Manes.15G101600 Manihot esculenta HOM05D004052 ORTHO05D004694 3.0e-09 65.5 114 40.4
Haze_08491 Corylus avellana HOM05D004052 ORTHO05D004694 3.9e-09 65.1 114 37.7
Actinidia04591 Actinidia chinensis HOM05D004052 ORTHO05D004694 6.6e-09 64.3 79 44.3
Sopen12g006690 Solanum pennellii HOM05D004052 ORTHO05D004694 1.1e-08 63.5 79 53.2
FAN21G2550 Fragaria x ananassa HOM05D004052 ORTHO05D004694 1.5e-08 63.2 109 40.4
Actinidia12841 Actinidia chinensis HOM05D004052 ORTHO05D004694 2.5e-08 62.4 74 47.3
CSS0033427 Camellia sinensis var. sinensis HOM05D004052 ORTHO05D004694 2.5e-08 62.4 84 48.8
Ca_03392_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 2.5e-08 62.4 105 38.1
Ca_29679_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 2.5e-08 62.4 105 38.1
MD05G1208600 Malus domestica HOM05D004052 ORTHO05D004694 2.5e-08 62.4 114 38.6
ECA234G3832 Erigeron canadensis HOM05D004052 ORTHO05D004694 3.3e-08 62.0 109 43.1
FAN16G0069 Fragaria x ananassa HOM05D004052 ORTHO05D004694 3.3e-08 62.0 109 40.4
Manes.03G091016 Manihot esculenta HOM05D004052 ORTHO05D004694 3.3e-08 62.0 113 37.2
RcHm_v2.0_Chr5g0027741 Rosa chinensis HOM05D004052 ORTHO05D004694 4.3e-08 61.6 109 41.3
FvH4_3g16600 Fragaria vesca HOM05D004052 ORTHO05D004694 5.6e-08 61.2 109 39.4
FAN11G2946 Fragaria x ananassa HOM05D004052 ORTHO05D004694 5.6e-08 61.2 109 39.4
Prupe.4G148800 Prunus persica HOM05D004052 ORTHO05D004694 5.6e-08 61.2 116 38.8
Hma1.2p1_1456F.1_g284600 Hydrangea macrophylla HOM05D004052 ORTHO05D004694 7.3e-08 60.8 76 47.4
Thecc.07G146300 Theobroma cacao HOM05D004052 ORTHO05D004694 7.3e-08 60.8 81 49.4
GSVIVG01038086001 Vitis vinifera HOM05D004052 ORTHO05D004694 7.3e-08 60.8 106 41.5
Rhsim06G0184900 Rhododendron simsii HOM05D004052 ORTHO05D004694 9.5e-08 60.5 82 48.8
CANSAT94G0014 Cannabis sativa HOM05D004052 ORTHO05D004694 1.2e-07 60.1 89 46.1
Potri.001G377900 Populus trichocarpa HOM05D004052 ORTHO05D004694 1.6e-07 59.7 88 39.8
Gorai.002G038800 Gossypium raimondii HOM05D004052 ORTHO05D004694 2.1e-07 59.3 113 40.7
Cc05_g10320 Coffea canephora HOM05D004052 ORTHO05D004694 2.8e-07 58.9 85 47.1
Duzib213G0683 Durio zibethinus HOM05D004052 ORTHO05D004694 2.8e-07 58.9 83 47.0
Gohir.D01G029700 Gossypium hirsutum HOM05D004052 ORTHO05D004694 2.8e-07 58.9 112 41.1
Lj1A816T35 Lonicera japonica HOM05D004052 ORTHO05D004694 2.8e-07 58.9 80 52.5
Sabra16G0248900 Salix brachista HOM05D004052 ORTHO05D004694 2.8e-07 58.9 113 39.8
EL10Ac4g08490 Beta vulgaris HOM05D004052 ORTHO05D004694 3.6e-07 58.5 112 39.3
COL.COLO4_17418 Corchorus olitorius HOM05D004052 ORTHO05D004694 4.7e-07 58.2 86 46.5
Atru.chr2.1894 Acer truncatum HOM05D004052 ORTHO05D004694 1.1e-06 57.0 84 44.0
TAR627G0253 Trochodendron aralioides HOM05D004052 ORTHO05D004694 1.1e-06 57.0 114 36.0
Glyma.15G248900 Glycine max HOM05D004052 ORTHO05D004694 1.4e-06 56.6 113 35.4
Cfa019455 Carpinus fangiana HOM05D004052 ORTHO05D004694 1.8e-06 56.2 108 37.0
TAR629G3304 Trochodendron aralioides HOM05D004052 ORTHO05D004694 1.8e-06 56.2 105 39.0
Gorai.009G359700 Gossypium raimondii HOM05D004052 ORTHO05D004694 4.0e-06 55.1 83 45.8
Dinv13312 Davidia involucrata HOM05D004052 ORTHO05D004694 5.2e-06 54.7 78 46.2
Duzib268G0054 Durio zibethinus HOM05D004052 ORTHO05D004694 6.8e-06 54.3 81 45.7
MD10G1195100 Malus domestica HOM05D004052 ORTHO05D004694 6.8e-06 54.3 109 37.6


User provided reference genes

Program Settings