Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 2.5e-133 478.8 240 100.0
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 2.3e-123 445.7 240 94.2
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.3e-122 441.8 240 93.8
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 5.4e-104 381.3 242 82.6
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 3.6e-100 368.6 250 80.4
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 5.4e-96 354.8 240 77.9
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 1.2e-79 300.4 244 65.6
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.6e-76 290.0 252 61.9
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 1.6e-76 290.0 244 63.1
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 4.7e-76 288.5 244 62.3
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 3.4e-74 282.3 243 62.1
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 1.7e-73 280.0 249 61.0
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 4.9e-73 278.5 244 61.1
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 6.4e-73 278.1 245 61.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 8.3e-73 277.7 247 62.3
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 8.3e-73 277.7 254 61.8
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.9e-72 276.6 244 58.6
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 2.4e-72 276.2 251 62.2
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 3.2e-72 275.8 248 59.3
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 7.1e-72 274.6 245 60.8
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 9.2e-72 274.2 247 61.5
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.2e-71 273.9 206 65.0
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.2e-71 273.9 246 57.7
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 2.1e-71 273.1 202 66.3
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 2.1e-71 273.1 245 60.4
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 1.3e-70 270.4 241 60.2
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 6.6e-70 268.1 253 60.1
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 6.6e-70 268.1 273 56.8
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.5e-69 266.9 264 56.8
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 4.3e-69 265.4 241 59.8
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.2e-68 263.8 213 65.7
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 1.6e-68 263.5 242 61.2
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.8e-68 262.7 241 59.8
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.1e-67 260.8 243 60.1
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.4e-67 260.4 248 59.3
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 3.1e-67 259.2 201 66.2
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.1e-67 259.2 244 58.2
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 4.0e-67 258.8 242 57.4
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 5.2e-67 258.5 241 56.8
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 8.9e-67 257.7 245 56.7
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 1.2e-66 257.3 241 56.8
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 3.4e-66 255.8 243 56.0
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 3.4e-66 255.8 219 60.7
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 4.4e-66 255.4 247 57.1
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 5.8e-66 255.0 249 55.4
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 9.9e-66 254.2 213 63.4
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 9.9e-66 254.2 242 58.7
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 1.3e-65 253.8 244 57.0
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 3.8e-65 252.3 243 57.6
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 3.8e-65 252.3 192 64.6
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 1.1e-64 250.8 241 55.2
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 2.4e-64 249.6 244 56.1
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 2.4e-64 249.6 244 56.1
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 3.2e-64 249.2 212 60.4
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 5.4e-64 248.4 241 56.4
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 7.1e-64 248.1 244 55.7
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 7.1e-64 248.1 211 62.1
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 9.2e-64 247.7 242 56.2
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 2.7e-63 246.1 208 61.1
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 2.7e-63 246.1 221 57.5
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 4.6e-63 245.4 208 61.1
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 6.0e-63 245.0 247 51.8
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 7.8e-63 244.6 209 62.7
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 7.8e-63 244.6 199 63.3
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 1.3e-62 243.8 207 62.8
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 1.3e-62 243.8 196 64.8
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.3e-62 243.8 207 57.5
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 3.0e-62 242.7 211 58.8
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 8.6e-62 241.1 251 54.2
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 8.6e-62 241.1 251 54.2
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.5e-61 240.4 243 55.1
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 1.9e-61 240.0 249 55.0
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 3.3e-61 239.2 205 60.5
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 4.3e-61 238.8 207 60.4
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 5.6e-61 238.4 203 61.6
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 2.1e-60 236.5 203 61.1
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 4.7e-60 235.3 195 59.5
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.4e-59 233.0 237 54.9
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.5e-58 230.3 193 58.0
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 6.4e-57 224.9 193 58.5
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 8.4e-57 224.6 245 52.2
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 2.4e-56 223.0 205 56.6
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 7.1e-56 221.5 244 52.5
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 1.3e-54 217.2 243 50.6
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 6.6e-54 214.9 198 56.6
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 1.5e-53 213.8 155 67.7
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.6e-52 210.3 130 72.3
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 5.3e-51 205.3 215 54.4
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.2e-50 204.1 319 43.6
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 3.8e-49 199.1 171 58.5
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 4.2e-48 195.7 258 45.7
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.1e-44 183.3 108 75.9
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 2.8e-44 183.0 110 73.6
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 6.2e-44 181.8 110 74.5
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 4.5e-42 175.6 134 56.7
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.9e-41 172.9 108 69.4
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.9e-41 172.2 109 71.6
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.9e-40 170.2 174 55.7
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 2.0e-34 150.2 87 78.2
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.7e-33 147.1 96 74.0
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 7.1e-32 141.7 187 42.8
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 4.6e-31 139.0 127 55.9
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 4.2e-24 115.9 137 53.3
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 2.3e-22 110.2 65 76.9
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 2.3e-22 110.2 65 76.9
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 1.1e-21 107.8 177 36.2
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.1e-21 107.8 77 68.8
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 3.3e-21 106.3 71 70.4
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 1.3e-20 104.4 122 41.8
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 2.2e-20 103.6 76 67.1
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 5.3e-19 99.0 60 75.0
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.4e-16 90.9 155 40.6
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 8.8e-14 81.6 125 36.8
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.1e-11 74.7 58 67.2
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 2.6e-10 70.1 114 45.6
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 1.3e-09 67.8 44 63.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 3.8e-09 66.2 53 67.9
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 8.5e-09 65.1 53 66.0
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 9.4e-08 61.6 131 35.1


User provided reference genes

Program Settings