Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 2.1e-213 745.3 363 100.0
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 4.9e-194 681.0 366 92.1
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 5.5e-193 677.6 369 91.3
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.3e-186 656.4 367 89.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.5e-182 642.9 389 82.8
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.1e-180 635.2 398 81.4
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.3e-178 629.8 373 84.7
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 7.2e-161 570.9 369 79.1
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 3.7e-149 531.9 399 68.4
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.5e-147 525.0 394 67.3
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 2.3e-146 522.7 376 70.5
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.5e-145 518.1 327 75.5
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.6e-144 516.5 383 68.4
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 3.6e-144 515.4 339 72.6
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.0e-143 513.8 342 71.9
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 3.0e-143 512.3 381 68.5
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 1.5e-142 510.0 334 73.4
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 2.6e-142 509.2 389 66.3
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.4e-142 508.8 337 73.9
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.4e-142 508.8 337 73.9
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 5.7e-142 508.1 390 64.4
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 6.3e-141 504.6 400 64.5
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 6.3e-141 504.6 321 75.4
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 3.1e-140 502.3 370 68.9
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.5e-139 498.8 388 64.4
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 5.9e-139 498.0 394 65.2
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.3e-138 496.1 358 68.7
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 8.6e-138 494.2 394 63.2
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 8.6e-138 494.2 395 63.8
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.5e-137 493.4 393 63.6
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.5e-137 493.4 327 72.2
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.9e-137 493.0 345 68.4
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 3.3e-137 492.3 391 62.9
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 3.3e-137 492.3 388 63.9
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 4.3e-137 491.9 391 63.4
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 7.3e-137 491.1 389 63.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 2.1e-136 489.6 401 60.6
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 3.6e-136 488.8 326 70.6
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 3.6e-136 488.8 390 63.3
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.0e-135 487.3 387 63.3
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.4e-135 486.9 366 64.5
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 1.4e-135 486.9 366 64.5
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.4e-135 486.9 388 62.9
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 2.3e-135 486.1 398 62.1
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 3.0e-135 485.7 397 61.7
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 5.2e-135 485.0 401 62.3
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.5e-134 483.4 366 64.2
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 2.0e-134 483.0 324 68.8
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 2.0e-134 483.0 392 63.0
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 2.6e-134 482.6 388 62.4
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 3.4e-134 482.3 358 65.9
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 4.4e-134 481.9 390 63.6
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 7.5e-134 481.1 327 70.0
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 9.8e-134 480.7 391 63.2
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 9.8e-134 480.7 381 64.3
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 1.3e-133 480.3 394 62.7
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.3e-133 480.3 396 63.6
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 1.7e-133 479.9 325 69.8
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 2.9e-133 479.2 406 60.8
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 4.9e-133 478.4 386 62.2
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 4.9e-133 478.4 323 70.3
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 4.9e-133 478.4 345 68.4
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 6.4e-133 478.0 334 68.6
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 6.4e-133 478.0 394 61.9
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 1.4e-132 476.9 374 63.4
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.4e-132 476.1 323 70.3
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 4.1e-132 475.3 368 63.6
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 4.1e-132 475.3 390 62.1
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 5.4e-132 474.9 325 69.2
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 9.2e-132 474.2 396 61.9
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 1.6e-131 473.4 372 62.6
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.6e-131 473.4 370 63.0
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 2.0e-131 473.0 377 62.9
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 1.0e-130 470.7 368 62.5
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.0e-130 470.7 390 62.1
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 3.0e-130 469.2 376 63.3
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.0e-130 468.4 311 71.7
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 6.6e-130 468.0 393 62.1
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 6.6e-130 468.0 400 61.5
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.5e-129 466.8 398 61.1
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.9e-129 466.5 373 63.3
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 2.5e-129 466.1 398 60.6
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 3.3e-129 465.7 377 60.5
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 9.5e-129 464.2 370 63.2
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.2e-128 463.8 309 71.8
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.1e-128 463.0 372 63.2
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 1.5e-126 456.8 331 66.2
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 5.8e-126 454.9 333 64.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.7e-125 453.4 331 65.0
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 1.1e-124 450.7 312 69.2
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 1.3e-122 443.7 379 60.2
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 5.6e-121 438.3 292 69.2
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 4.0e-119 432.2 321 63.9
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.9e-117 426.0 397 54.9
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.4e-116 423.7 441 51.5
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 3.5e-115 419.1 397 57.4
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 6.2e-112 408.3 300 65.0
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 6.2e-112 408.3 277 70.4
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.3e-106 389.8 391 52.7
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 3.8e-101 372.5 323 59.8
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 3.2e-100 369.4 343 56.3
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 9.9e-94 347.8 384 47.4
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 4.9e-93 345.5 248 68.1
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 6.0e-91 338.6 299 54.2
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.0e-90 337.8 299 53.8
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.8e-90 337.0 386 45.9
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.0e-86 323.6 231 68.8
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 2.0e-46 190.7 384 38.0
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.6e-38 164.5 99 71.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 4.0e-34 149.8 92 75.0
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.4e-26 124.8 149 47.7
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 9.8e-25 118.6 255 32.2
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.1e-23 113.2 65 73.8
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 4.5e-22 109.8 77 63.6
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.2e-17 95.1 49 87.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.5e-17 92.4 111 54.1
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 5.6e-12 76.3 53 67.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 5.2e-10 69.7 128 34.4


User provided reference genes

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