Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007123 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.4e-50 202.6 101 100.0
Solyc06g074540.4 Solanum lycopersicum HOM05D003745 ORTHO05D004215 4.2e-42 174.5 101 88.1
Sopen06g031010 Solanum pennellii HOM05D003745 ORTHO05D004215 1.4e-37 159.5 87 89.7
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 9.0e-29 130.2 105 70.5
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 1.5e-23 112.8 102 63.7
Nitab4.5_0010833g0010 Nicotiana tabacum HOM05D003745 ORTHO05D004215 6.1e-17 90.9 95 62.1
Peaxi162Scf00789g00618 Petunia axillaris HOM05D003745 ORTHO05D004215 4.8e-14 81.3 93 51.6
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 5.3e-13 77.8 97 50.5
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.0e-12 75.9 97 47.4
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 2.2e-11 72.4 95 44.2
Cc01_g09790 Coffea canephora HOM05D003745 ORTHO05D004215 2.2e-11 72.4 101 45.5
Carub.0005s1042 Capsella rubella HOM05D003745 ORTHO05D004215 5.0e-11 71.2 90 42.2
Carub.0015s0003 Capsella rubella HOM05D003745 ORTHO05D004215 5.0e-11 71.2 90 42.2
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 5.0e-11 71.2 101 41.6
CSS0049961 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 1.1e-10 70.1 99 48.5
PGSC0003DMG400026535 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.5e-10 69.7 96 47.9
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 1.9e-10 69.3 103 47.6
EL10Ac9g21084 Beta vulgaris HOM05D003745 ORTHO05D004215 2.5e-10 68.9 96 43.8
CSS0006810 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.5e-10 68.9 97 47.4
CAN.G644.31 Capsicum annuum HOM05D003745 ORTHO05D004215 3.2e-10 68.6 104 45.2
Lsat_1_v5_gn_6_41120 Lactuca sativa HOM05D003745 ORTHO05D004215 3.2e-10 68.6 59 57.6
AT3G44735 Arabidopsis thaliana HOM05D003745 ORTHO05D004215 7.2e-10 67.4 69 50.7
ECA233G0462 Erigeron canadensis HOM05D003745 ORTHO05D004215 7.2e-10 67.4 90 40.0
Solyc11g066880.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 7.2e-10 67.4 104 45.2
Sopen11g026590 Solanum pennellii HOM05D003745 ORTHO05D004215 7.2e-10 67.4 86 48.8
CANSAT54G1542 Cannabis sativa HOM05D003745 ORTHO05D004215 9.4e-10 67.0 77 46.8
CARHR151430 Cardamine hirsuta HOM05D003745 ORTHO05D004215 9.4e-10 67.0 70 48.6
AL5G22960 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 1.2e-09 66.6 90 44.4
Cpa.g.sc5.75 Carica papaya HOM05D003745 ORTHO05D004215 1.2e-09 66.6 98 45.9
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 1.2e-09 66.6 98 42.9
SalBow3G0913 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.2e-09 66.6 51 60.8
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.2e-09 66.6 97 41.2
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.1e-09 65.9 87 43.7
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.1e-09 65.9 85 47.1
Gorai.002G242400 Gossypium raimondii HOM05D003745 ORTHO05D004215 2.1e-09 65.9 91 37.4
Nitab4.5_0000663g0130 Nicotiana tabacum HOM05D003745 ORTHO05D004215 2.1e-09 65.9 92 41.3
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 2.1e-09 65.9 87 37.9
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 4.7e-09 64.7 91 40.7
Gohir.A01G209100 Gossypium hirsutum HOM05D003745 ORTHO05D004215 6.1e-09 64.3 91 38.5
Gorai.006G109700 Gossypium raimondii HOM05D003745 ORTHO05D004215 6.1e-09 64.3 97 41.2
A10p32390 Brassica napus HOM05D003745 ORTHO05D004215 8.0e-09 63.9 94 40.4
BraA10t45279Z Brassica rapa HOM05D003745 ORTHO05D004215 8.0e-09 63.9 94 40.4
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 8.0e-09 63.9 99 45.5
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 8.0e-09 63.9 87 47.1
Gohir.D01G198200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 8.0e-09 63.9 91 37.4
Sp5g16440 Schrenkiella parvula HOM05D003745 ORTHO05D004215 8.0e-09 63.9 92 40.2
CARHR209590 Cardamine hirsuta HOM05D003745 ORTHO05D004215 1.0e-08 63.5 74 44.6
Duzib150G0771 Durio zibethinus HOM05D003745 ORTHO05D004215 1.0e-08 63.5 85 37.6
MSTRG.21061 Avicennia marina HOM05D003745 ORTHO05D004215 1.4e-08 63.2 94 43.6
Thhalv10015130m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 1.4e-08 63.2 45 62.2
vmacro07360 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.4e-08 63.2 97 40.2
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 1.8e-08 62.8 87 47.1
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.8e-08 62.8 97 43.3
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.3e-08 62.4 97 44.3
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.3e-08 62.4 85 41.2
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 2.3e-08 62.4 85 41.2
TWI79G1201 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 2.3e-08 62.4 85 38.8
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 2.3e-08 62.4 92 43.5
Ciclev10029683m.g Citrus clementina HOM05D003745 ORTHO05D004215 3.0e-08 62.0 90 44.4
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 3.0e-08 62.0 87 46.0
Nitab4.5_0000132g0150 Nicotiana tabacum HOM05D003745 ORTHO05D004215 3.0e-08 62.0 61 49.2
Peaxi162Scf00110g02023 Petunia axillaris HOM05D003745 ORTHO05D004215 3.0e-08 62.0 91 42.9
QL07p040518 Quercus lobata HOM05D003745 ORTHO05D004215 3.0e-08 62.0 84 40.5
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 3.0e-08 62.0 89 40.4
Thecc.09G291500 Theobroma cacao HOM05D003745 ORTHO05D004215 3.0e-08 62.0 97 41.2
C09p73210 Brassica napus HOM05D003745 ORTHO05D004215 4.0e-08 61.6 95 40.0
BolC9t60056H Brassica oleracea HOM05D003745 ORTHO05D004215 4.0e-08 61.6 95 40.0
MD12G1018200 Malus domestica HOM05D003745 ORTHO05D004215 4.0e-08 61.6 98 39.8
MD14G1016200 Malus domestica HOM05D003745 ORTHO05D004215 4.0e-08 61.6 97 38.1
Peaxi162Scf00433g00025 Petunia axillaris HOM05D003745 ORTHO05D004215 4.0e-08 61.6 92 39.1
TAR633G1338 Trochodendron aralioides HOM05D003745 ORTHO05D004215 4.0e-08 61.6 57 56.1
vmacro23105 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 4.0e-08 61.6 49 67.3
Haze_23447 Corylus avellana HOM05D003745 ORTHO05D004215 5.2e-08 61.2 38 65.8
Gohir.D09G093000 Gossypium hirsutum HOM05D003745 ORTHO05D004215 5.2e-08 61.2 97 42.3
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 5.2e-08 61.2 85 41.2
Aqoxy2G01397 Aquilegia oxysepala HOM05D003745 ORTHO05D004215 6.7e-08 60.8 45 64.4
CiPaw.14G103500 Carya illinoinensis HOM05D003745 ORTHO05D004215 6.7e-08 60.8 85 38.8
Duzib128G0603 Durio zibethinus HOM05D003745 ORTHO05D004215 6.7e-08 60.8 90 40.0
Hund00782 Selenicereus undatus HOM05D003745 ORTHO05D004215 6.7e-08 60.8 100 35.0
Atru.chr3.3378 Acer truncatum HOM05D003745 ORTHO05D004215 8.8e-08 60.5 46 56.5
AL6G13230 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 8.8e-08 60.5 45 60.0
Manes.08G021100 Manihot esculenta HOM05D003745 ORTHO05D004215 8.8e-08 60.5 44 65.9
Sp6g39010 Schrenkiella parvula HOM05D003745 ORTHO05D004215 8.8e-08 60.5 40 67.5
THA.LOC104799535 Tarenaya hassleriana HOM05D003745 ORTHO05D004215 8.8e-08 60.5 96 36.5
TAR636G1780 Trochodendron aralioides HOM05D003745 ORTHO05D004215 8.8e-08 60.5 47 59.6
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 1.1e-07 60.1 85 41.2
COL.COLO4_19298 Corchorus olitorius HOM05D003745 ORTHO05D004215 1.1e-07 60.1 85 36.5
Duzib106G0076 Durio zibethinus HOM05D003745 ORTHO05D004215 1.1e-07 60.1 41 58.5
vmacro03277 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.1e-07 60.1 95 40.0
vmacro23109 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 1.1e-07 60.1 95 40.0
MSTRG.17729 Avicennia marina HOM05D003745 ORTHO05D004215 1.5e-07 59.7 40 65.0
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 1.5e-07 59.7 86 41.9
CiPaw.13G141100 Carya illinoinensis HOM05D003745 ORTHO05D004215 1.5e-07 59.7 86 40.7
Potri.004G188200 Populus trichocarpa HOM05D003745 ORTHO05D004215 1.5e-07 59.7 93 44.1
QL01p013692 Quercus lobata HOM05D003745 ORTHO05D004215 1.5e-07 59.7 91 41.8
Actinidia35448 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.0e-07 59.3 98 41.8
Gohir.A04G066114 Gossypium hirsutum HOM05D003745 ORTHO05D004215 2.0e-07 59.3 39 61.5
Phvul.007G223101 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 2.0e-07 59.3 84 35.7
Potri.009G148900 Populus trichocarpa HOM05D003745 ORTHO05D004215 2.0e-07 59.3 89 38.2
Rhsim01G0208400 Rhododendron simsii HOM05D003745 ORTHO05D004215 2.0e-07 59.3 44 65.9
Duzib168G0884 Durio zibethinus HOM05D003745 ORTHO05D004215 2.6e-07 58.9 97 36.1
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 2.6e-07 58.9 88 38.6
Gohir.A07G107300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 2.6e-07 58.9 101 39.6
Gorai.001G119600 Gossypium raimondii HOM05D003745 ORTHO05D004215 2.6e-07 58.9 101 38.6
Prupe.7G116900 Prunus persica HOM05D003745 ORTHO05D004215 2.6e-07 58.9 40 65.0
C01p34270 Brassica napus HOM05D003745 ORTHO05D004215 3.3e-07 58.5 90 38.9
BolC1t03395H Brassica oleracea HOM05D003745 ORTHO05D004215 3.3e-07 58.5 90 38.9
Duzib093G0672 Durio zibethinus HOM05D003745 ORTHO05D004215 3.3e-07 58.5 86 37.2
Gohir.D07G111300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 3.3e-07 58.5 101 38.6
Rhsim03G0081200 Rhododendron simsii HOM05D003745 ORTHO05D004215 3.3e-07 58.5 97 42.3
Carub.0006s0262 Capsella rubella HOM05D003745 ORTHO05D004215 4.4e-07 58.2 44 61.4
FAN05G2107 Fragaria x ananassa HOM05D003745 ORTHO05D004215 4.4e-07 58.2 42 66.7
FAN05G2814 Fragaria x ananassa HOM05D003745 ORTHO05D004215 4.4e-07 58.2 42 66.7
Sc12g0004180 Simmondsia chinensis HOM05D003745 ORTHO05D004215 4.4e-07 58.2 46 58.7
PGSC0003DMG400002682 Solanum tuberosum HOM05D003745 ORTHO05D004215 4.4e-07 58.2 89 40.4
TAR369G1123 Trochodendron aralioides HOM05D003745 ORTHO05D004215 4.4e-07 58.2 90 40.0
Sabra04G0127200 Salix brachista HOM05D003745 ORTHO05D004215 5.7e-07 57.8 97 41.2
Sc12g0004160 Simmondsia chinensis HOM05D003745 ORTHO05D004215 5.7e-07 57.8 97 40.2
Sopen09g003840 Solanum pennellii HOM05D003745 ORTHO05D004215 5.7e-07 57.8 39 61.5
Thhalv10002908m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 7.5e-07 57.4 51 52.9
Lj5g0022060 Lotus japonicus HOM05D003745 ORTHO05D004215 7.5e-07 57.4 88 38.6
Medtr1g061120 Medicago truncatula HOM05D003745 ORTHO05D004215 7.5e-07 57.4 87 34.5
TPR.G32386 Trifolium pratense HOM05D003745 ORTHO05D004215 7.5e-07 57.4 84 45.2
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 7.5e-07 57.4 87 36.8
Actinidia37099 Actinidia chinensis HOM05D003745 ORTHO05D004215 9.7e-07 57.0 102 42.2
FAN02G0871 Fragaria x ananassa HOM05D003745 ORTHO05D004215 9.7e-07 57.0 42 66.7
Manes.11G157100 Manihot esculenta HOM05D003745 ORTHO05D004215 9.7e-07 57.0 89 42.7
Oeu001652.1 Olea europaea HOM05D003745 ORTHO05D004215 9.7e-07 57.0 97 42.3
MD11G1157500 Malus domestica HOM05D003745 ORTHO05D004215 1.3e-06 56.6 99 44.4
PGSC0003DMG400028173 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.3e-06 56.6 57 49.1
FvH4_6g17920 Fragaria vesca HOM05D003745 ORTHO05D004215 1.7e-06 56.2 92 40.2
FAN14G5394 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.7e-06 56.2 92 40.2
Oeu040536.1 Olea europaea HOM05D003745 ORTHO05D004215 1.7e-06 56.2 41 58.5
CANSAT80G1673 Cannabis sativa HOM05D003745 ORTHO05D004215 2.2e-06 55.8 98 41.8
Cc06_g05290 Coffea canephora HOM05D003745 ORTHO05D004215 2.2e-06 55.8 41 56.1
Lj3g0011252 Lotus japonicus HOM05D003745 ORTHO05D004215 2.2e-06 55.8 85 42.4
Nitab4.5_0006360g0020 Nicotiana tabacum HOM05D003745 ORTHO05D004215 2.2e-06 55.8 93 39.8
PGR004G1125 Punica granatum HOM05D003745 ORTHO05D004215 2.2e-06 55.8 51 52.9
RcHm_v2.0_Chr3g0472171 Rosa chinensis HOM05D003745 ORTHO05D004215 2.2e-06 55.8 92 39.1
MD03G1134700 Malus domestica HOM05D003745 ORTHO05D004215 2.8e-06 55.5 97 38.1
Eucgr.B03895 Eucalyptus grandis HOM05D003745 ORTHO05D004215 3.7e-06 55.1 91 36.3
FAN09G1254 Fragaria x ananassa HOM05D003745 ORTHO05D004215 3.7e-06 55.1 40 57.5
Solyc10g083580.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 3.7e-06 55.1 57 47.4
Sopen10g033060 Solanum pennellii HOM05D003745 ORTHO05D004215 3.7e-06 55.1 57 47.4
Atru.chr8.1631 Acer truncatum HOM05D003745 ORTHO05D004215 4.8e-06 54.7 102 36.3
BraA01t02615Z Brassica rapa HOM05D003745 ORTHO05D004215 4.8e-06 54.7 41 58.5
Duzib106G0171 Durio zibethinus HOM05D003745 ORTHO05D004215 4.8e-06 54.7 99 35.4
HanXRQChr13g0396991 Helianthus annuus HOM05D003745 ORTHO05D004215 4.8e-06 54.7 39 69.2
Nn6g35042 Nelumbo nucifera HOM05D003745 ORTHO05D004215 4.8e-06 54.7 38 65.8
PSO063G0377 Papaver somniferum HOM05D003745 ORTHO05D004215 4.8e-06 54.7 105 38.1
Glyma.12G181700 Glycine max HOM05D003745 ORTHO05D004215 6.3e-06 54.3 94 37.2
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 6.3e-06 54.3 101 37.6
SalBow3G0501 Salvia bowleyana HOM05D003745 ORTHO05D004215 6.3e-06 54.3 37 62.2
CiPaw.10G005500 Carya illinoinensis HOM05D003745 ORTHO05D004215 8.2e-06 53.9 86 38.4
Ciclev10013197m.g Citrus clementina HOM05D003745 ORTHO05D004215 8.2e-06 53.9 101 36.6
Gohir.A01G209200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 8.2e-06 53.9 67 35.8
PSO339G1716 Papaver somniferum HOM05D003745 ORTHO05D004215 8.2e-06 53.9 106 37.7


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