Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 3.5e-94 348.2 165 100.0
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 3.6e-91 338.2 164 97.6
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 2.3e-90 335.5 162 97.5
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.5e-84 315.5 162 91.4
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 4.2e-84 314.7 162 90.7
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 8.3e-72 273.9 163 77.9
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 3.1e-71 271.9 162 80.2
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 2.7e-70 268.9 161 75.8
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 1.3e-69 266.5 161 74.5
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.3e-69 266.5 161 74.5
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.3e-69 266.5 161 73.9
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 1.7e-69 266.2 159 73.6
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.3e-69 265.8 162 73.5
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 4.3e-68 261.5 161 76.4
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 7.3e-68 260.8 163 74.2
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 9.5e-68 260.4 161 70.8
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.2e-67 260.0 164 72.6
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 1.6e-67 259.6 159 74.2
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 2.1e-67 259.2 162 73.5
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 2.8e-67 258.8 161 70.2
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 3.6e-67 258.5 165 71.5
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 3.6e-67 258.5 162 72.2
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.6e-67 258.5 159 76.7
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.6e-67 258.5 159 76.7
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 4.7e-67 258.1 162 71.0
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 6.1e-67 257.7 161 72.0
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 6.1e-67 257.7 163 73.6
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 6.1e-67 257.7 163 69.9
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.0e-66 256.9 161 71.4
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.8e-66 256.1 163 73.6
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 2.3e-66 255.8 164 72.6
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 3.0e-66 255.4 163 71.8
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 4.0e-66 255.0 162 73.5
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.8e-66 254.2 163 71.2
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 6.8e-66 254.2 163 71.2
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 6.8e-66 254.2 165 70.3
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 6.8e-66 254.2 163 73.6
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 2.0e-65 252.7 163 71.2
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.0e-65 252.7 179 67.0
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 5.7e-65 251.1 164 72.6
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 5.7e-65 251.1 161 69.6
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 7.5e-65 250.8 159 72.3
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 1.3e-64 250.0 163 69.3
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.7e-64 249.6 163 70.6
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.7e-64 249.6 163 68.7
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 2.2e-64 249.2 162 73.5
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.2e-64 249.2 159 69.8
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.8e-63 246.1 160 70.6
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 3.2e-63 245.4 159 71.1
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 4.1e-63 245.0 163 70.6
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 7.0e-63 244.2 163 67.5
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 9.2e-63 243.8 164 70.7
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 1.2e-62 243.4 162 69.8
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.2e-62 243.4 161 67.7
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 3.5e-62 241.9 165 67.9
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 3.5e-62 241.9 163 69.3
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 4.6e-62 241.5 161 68.3
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 7.8e-62 240.7 162 69.8
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 1.3e-61 240.0 161 68.3
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 2.3e-61 239.2 161 67.1
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 2.3e-61 239.2 161 67.7
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 2.3e-61 239.2 159 68.6
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 2.3e-61 239.2 162 68.5
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 3.0e-61 238.8 162 67.9
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 3.0e-61 238.8 163 68.7
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 8.6e-61 237.3 161 67.7
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.9e-60 236.1 162 67.9
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 3.3e-60 235.3 160 65.0
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 4.3e-60 235.0 161 65.8
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 4.3e-60 235.0 162 68.5
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 7.3e-60 234.2 161 65.2
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 9.5e-60 233.8 162 66.0
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 9.5e-60 233.8 162 64.8
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 1.2e-59 233.4 165 64.2
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 2.8e-59 232.3 161 66.5
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 4.7e-59 231.5 161 65.8
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 4.7e-59 231.5 165 64.8
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 6.2e-59 231.1 161 63.4
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 3.1e-58 228.8 163 63.2
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 4.0e-58 228.4 136 75.7
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 6.8e-58 227.6 163 62.0
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 6.8e-58 227.6 163 62.0
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 8.9e-58 227.3 162 65.4
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 1.5e-57 226.5 163 62.6
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 3.4e-57 225.3 165 63.0
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 6.4e-56 221.1 136 73.5
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 4.7e-51 204.9 136 68.4
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 6.2e-51 204.5 123 74.8
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 6.8e-50 201.1 135 63.7
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 3.4e-49 198.7 161 59.6
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 4.4e-49 198.4 164 53.0
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 9.8e-49 197.2 161 60.9
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.2e-48 196.1 136 69.1
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 8.3e-48 194.1 167 53.9
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 4.6e-46 188.3 162 58.0
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 2.3e-45 186.0 161 58.4
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 3.0e-45 185.7 164 50.6
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 4.3e-44 181.8 159 50.9
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 4.7e-43 178.3 185 49.2
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 2.2e-40 169.5 106 68.9
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.7e-38 162.5 101 72.3
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.7e-38 162.5 101 72.3
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 4.6e-38 161.8 159 53.5
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 1.0e-37 160.6 101 68.3
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 1.3e-32 143.7 186 41.4
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.9e-31 139.8 89 71.9
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 2.4e-31 139.4 140 49.3
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 7.1e-31 137.9 81 74.1
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 6.9e-26 121.3 73 74.0
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 2.0e-25 119.8 234 34.2
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.9e-20 103.2 145 37.2
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 2.4e-18 96.3 78 56.4
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.1e-15 87.4 59 67.8
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.2e-14 84.0 62 62.9
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 4.6e-14 82.0 59 62.7
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 3.9e-13 79.0 58 65.5
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 1.1e-12 77.4 194 30.9
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 1.6e-11 73.6 43 74.4
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 4.8e-11 72.0 57 61.4
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 4.0e-10 68.9 97 39.2
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.9e-07 60.1 43 65.1


User provided reference genes

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