Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.3e-193 677.6 352 100.0
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.4e-63 247.7 131 88.5
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 6.7e-63 245.4 131 87.8
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.3e-61 238.8 131 83.2
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-60 236.9 129 86.0
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.8e-53 212.6 121 82.6
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.8e-45 186.8 131 67.2
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.7e-43 178.7 131 62.6
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 3.8e-42 176.4 131 61.8
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.2e-41 173.3 135 60.0
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.2e-41 173.3 130 65.4
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.2e-41 172.2 132 60.6
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.6e-40 171.0 131 58.8
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.8e-39 165.6 129 59.7
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.2e-38 164.9 126 63.5
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-38 164.5 131 57.3
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-38 164.5 130 56.9
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 4.4e-38 162.9 132 57.6
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 7.5e-38 162.2 128 57.8
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 2.2e-37 160.6 130 55.4
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 9.2e-36 155.2 131 53.4
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 2.3e-34 150.6 130 56.2
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 2.9e-34 150.2 121 57.9
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-33 147.5 127 55.1
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.3e-33 146.4 110 66.4
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-32 142.5 114 62.3
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.0e-31 140.2 134 49.3
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.0e-31 140.2 130 50.0
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.0e-30 137.5 131 46.6
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 9.8e-30 135.2 131 48.1
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 7.0e-28 129.0 132 46.2
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-27 127.9 110 56.4
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.7e-26 124.4 118 51.7
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.1e-25 121.7 132 42.4
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.3e-25 119.0 98 55.1
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.2e-24 118.2 131 42.0
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.6e-24 117.9 81 67.9
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 6.2e-24 115.9 129 41.1
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 6.2e-24 115.9 129 39.5
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.3e-23 114.0 134 38.1
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 3.1e-23 113.6 131 47.3
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 4.0e-23 113.2 107 50.5
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 6.8e-23 112.5 143 43.4
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 8.9e-23 112.1 132 40.9
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 2.0e-22 110.9 129 41.9
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 4.4e-22 109.8 131 47.3
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.7e-21 106.7 122 46.7
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.4e-20 104.8 124 47.6
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 3.2e-20 103.6 134 41.0
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.1e-20 103.2 131 44.3
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 2.7e-19 100.5 131 37.4
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.8e-19 99.0 79 59.5
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.3e-18 97.4 71 69.0
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 1.1e-15 88.6 131 38.9
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-15 87.8 111 35.1
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 1.8e-15 87.8 108 38.9
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.1e-15 87.0 114 40.4
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.0e-15 86.7 121 36.4
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.8e-15 85.9 97 45.4
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 5.8e-14 82.8 70 50.0
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 9.8e-14 82.0 88 42.0
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.7e-13 81.3 129 31.0
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 3.7e-13 80.1 117 35.9
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 7.8e-11 72.4 56 58.9
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.3e-10 70.9 120 30.0
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 3.0e-10 70.5 117 33.3
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.5e-09 67.4 69 47.8
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.3e-09 65.9 41 65.9
PGSC0003DMG400007042 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-08 64.3 33 87.9
TWI34G0085 Tripterygium wilfordii HOM05D001713 ORTHO05D001669 1.1e-07 62.0 119 31.9
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.0e-06 57.8 68 39.7
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.4e-06 56.6 117 27.4
THA.LOC104815134 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 7.6e-06 55.8 120 33.3
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 9.9e-06 55.5 122 31.1
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 9.9e-06 55.5 122 31.1
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 9.9e-06 55.5 122 31.1


User provided reference genes

Program Settings