Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 3.7e-191 671.4 339 100.0
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 7.9e-186 653.7 339 97.3
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 3.0e-185 651.7 339 97.1
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 8.2e-175 617.1 339 92.0
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 9.1e-174 613.6 338 91.1
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 6.5e-148 527.7 336 81.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 5.6e-131 471.5 323 74.6
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 2.6e-128 462.6 326 72.4
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 9.8e-128 460.7 325 74.2
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.2e-127 459.5 336 71.7
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.6e-125 453.4 313 72.5
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 7.8e-125 451.1 323 70.6
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 8.6e-124 447.6 325 70.8
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 6.2e-122 441.4 265 80.8
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.4e-121 440.3 357 64.7
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 2.3e-121 439.5 323 71.8
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.3e-121 439.5 322 70.2
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 2.6e-120 436.0 327 70.3
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 2.6e-120 436.0 323 66.9
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 1.3e-119 433.7 307 70.7
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 5.4e-118 428.3 314 69.7
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.2e-117 427.2 275 74.9
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.7e-117 426.0 280 74.6
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 3.5e-117 425.6 317 66.6
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 4.6e-117 425.2 312 69.9
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.3e-116 423.7 308 67.9
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 2.3e-116 422.9 319 67.4
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.9e-115 419.9 294 72.8
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.1e-113 414.1 324 67.9
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 1.4e-113 413.7 328 67.1
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.4e-113 413.7 323 67.8
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 3.1e-113 412.5 309 68.3
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 3.1e-113 412.5 270 72.6
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.0e-113 412.1 329 68.7
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 8.9e-113 411.0 319 68.3
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 8.9e-113 411.0 322 66.8
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.5e-112 410.2 282 73.4
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.5e-112 410.2 322 68.0
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 2.6e-112 409.5 328 68.3
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.4e-112 409.1 327 68.8
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 7.5e-112 407.9 304 68.8
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.3e-111 407.1 323 65.6
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.3e-111 407.1 317 66.2
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 6.4e-111 404.8 319 69.0
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.9e-110 403.3 263 73.8
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 5.4e-110 401.7 328 66.5
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 7.1e-110 401.4 307 66.1
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 9.2e-110 401.0 328 66.2
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 9.2e-110 401.0 328 66.2
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 2.7e-109 399.4 281 69.8
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 4.6e-109 398.7 267 72.7
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 6.0e-109 398.3 320 66.2
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 7.8e-109 397.9 253 77.5
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.3e-108 397.1 275 72.4
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 3.9e-108 395.6 254 75.2
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 2.5e-107 392.9 322 66.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 3.6e-106 389.0 305 65.9
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.8e-105 386.7 286 69.6
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 8.9e-105 384.4 279 72.0
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.2e-104 384.0 277 68.6
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.2e-104 384.0 347 60.8
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 1.3e-103 380.6 329 65.0
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 1.7e-103 380.2 253 75.1
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 2.2e-103 379.8 266 72.2
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.4e-102 376.3 288 67.0
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 4.2e-102 375.6 321 65.1
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 3.5e-101 372.5 319 60.5
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 7.8e-101 371.3 257 72.4
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 1.0e-100 370.9 272 66.5
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 1.0e-100 370.9 273 68.5
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.7e-100 370.2 314 63.4
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.3e-100 369.8 283 66.1
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 2.3e-100 369.8 284 64.1
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 3.9e-100 369.0 272 67.6
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 3.9e-100 369.0 324 63.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 6.6e-100 368.2 223 78.5
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 1.5e-99 367.1 273 68.1
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.5e-99 366.3 308 66.6
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 7.3e-99 364.8 320 63.1
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 6.2e-98 361.7 249 70.7
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.1e-97 360.9 308 62.3
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.8e-97 360.1 281 65.5
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 3.1e-97 359.4 277 66.8
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 2.0e-96 356.7 281 65.1
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 2.0e-96 356.7 281 65.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 4.9e-95 352.1 305 58.4
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.9e-94 350.1 252 67.5
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 2.4e-94 349.7 232 74.6
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 6.0e-93 345.1 296 64.5
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.3e-92 343.2 176 94.3
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.6e-91 338.6 222 74.3
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 2.4e-89 333.2 197 81.2
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.2e-88 330.9 214 75.7
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 1.2e-88 330.9 258 64.0
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 2.6e-88 329.7 298 60.1
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 3.1e-81 306.2 253 61.3
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 1.5e-80 303.9 239 67.8
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.6e-77 293.9 176 80.7
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 5.6e-75 285.4 284 54.6
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 1.3e-74 284.3 231 63.6
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.2e-71 273.5 189 72.5
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 9.0e-65 251.5 231 56.7
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.7e-63 247.3 198 60.6
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 2.2e-63 246.9 201 58.2
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.1e-62 244.6 200 64.0
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 4.3e-59 232.6 230 56.1
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 3.1e-57 226.5 207 55.1
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 3.3e-51 206.5 235 47.7
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 3.9e-44 183.0 164 55.5
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 4.8e-42 176.0 251 38.6
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 4.1e-41 172.9 208 42.3
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.7e-39 167.5 125 62.4
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 2.0e-35 154.1 99 77.8
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 5.9e-32 142.5 87 81.6
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 3.8e-31 139.8 83 78.3
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 8.0e-29 132.1 120 51.7
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 7.2e-22 109.0 60 88.3
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 3.0e-20 103.6 75 70.7
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 1.1e-09 68.6 119 42.0
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.6e-08 64.7 37 81.1
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.3e-07 60.8 146 31.5
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 7.3e-06 55.8 26 84.6


User provided reference genes

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