Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 2.3e-68 262.3 150 100.0
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.9e-51 206.1 154 79.9
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 5.6e-51 204.5 161 78.9
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 3.6e-50 201.8 159 72.3
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 6.9e-41 171.0 127 80.3
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.8e-33 146.4 139 59.7
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 2.2e-31 139.4 151 62.9
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.2e-31 139.4 146 59.6
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 2.2e-31 139.4 141 58.2
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 4.9e-31 138.3 140 55.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 9.3e-30 134.0 141 56.0
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.2e-29 133.7 101 65.3
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.1e-29 132.9 101 65.3
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 3.5e-29 132.1 149 50.3
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.0e-28 130.6 141 53.2
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.8e-28 129.8 137 52.6
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 3.9e-28 128.6 104 66.3
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 3.9e-28 128.6 137 53.3
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 5.1e-28 128.3 143 51.0
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 5.1e-28 128.3 143 51.0
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 2.5e-27 125.9 141 62.4
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.3e-27 125.6 143 49.0
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 7.4e-27 124.4 143 48.3
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 7.4e-27 124.4 138 59.4
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 9.6e-27 124.0 136 50.7
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.6e-26 123.2 145 49.7
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.1e-26 122.9 136 52.9
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 2.8e-26 122.5 149 47.7
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 3.7e-26 122.1 107 64.5
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.1e-25 120.6 106 63.2
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.1e-25 120.6 92 65.2
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 1.1e-25 120.6 104 61.5
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.1e-25 120.6 137 51.1
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 1.1e-25 120.6 104 63.5
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 4.0e-25 118.6 92 65.2
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 4.0e-25 118.6 102 59.8
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 9.0e-25 117.5 161 48.4
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 9.0e-25 117.5 157 48.4
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 9.0e-25 117.5 140 47.1
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.0e-24 116.3 103 64.1
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.6e-24 115.9 140 50.0
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 3.4e-24 115.5 148 48.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.4e-24 115.5 156 49.4
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 3.4e-24 115.5 88 67.0
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 5.8e-24 114.8 140 50.7
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.3e-23 113.6 161 48.4
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.7e-23 113.2 138 49.3
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.9e-23 112.5 138 47.8
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.9e-23 111.7 161 47.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 4.9e-23 111.7 140 48.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.1e-22 110.5 144 46.5
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.4e-22 110.2 101 58.4
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 4.2e-22 108.6 100 65.0
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 5.5e-22 108.2 112 68.8
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 7.1e-22 107.8 131 48.9
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.2e-21 107.1 93 63.4
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.6e-21 106.7 95 58.9
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 1.6e-21 106.7 153 45.8
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.5e-21 105.5 97 56.7
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 4.6e-21 105.1 145 44.1
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 7.9e-21 104.4 119 53.8
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.5e-19 100.1 103 57.3
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 2.5e-19 99.4 102 58.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 2.5e-19 99.4 102 52.9
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 3.3e-19 99.0 158 43.0
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 9.7e-19 97.4 103 57.3
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 9.7e-19 97.4 102 57.8
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 9.7e-19 97.4 110 50.0
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 2.2e-18 96.3 102 57.8
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 2.8e-18 95.9 103 56.3
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.8e-18 95.9 111 47.7
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 3.7e-18 95.5 111 51.4
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 4.8e-18 95.1 103 56.3
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 4.8e-18 95.1 109 50.5
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 4.8e-18 95.1 109 50.5
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 4.8e-18 95.1 89 56.2
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 6.3e-18 94.7 89 58.4
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 2.4e-17 92.8 102 54.9
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 5.3e-17 91.7 103 54.4
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 6.9e-17 91.3 102 54.9
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 7.6e-16 87.8 100 56.0
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.3e-15 87.0 101 55.4
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.2e-15 86.3 103 50.5
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 1.1e-14 84.0 99 53.5
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.1e-14 84.0 182 41.2
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.1e-14 84.0 182 41.2
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 1.2e-13 80.5 99 49.5
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 1.2e-13 80.5 129 45.7
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 2.7e-13 79.3 105 51.4
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 2.7e-13 79.3 105 51.4
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.0e-12 77.4 100 44.0
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.0e-12 77.4 101 45.5
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 1.8e-12 76.6 143 47.6
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 8.8e-12 74.3 104 47.1
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.5e-11 73.6 98 42.9
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 1.5e-11 73.6 119 40.3
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.3e-11 72.4 98 43.9
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 9.7e-11 70.9 96 50.0
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.8e-10 69.3 91 44.0
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.3e-09 65.1 87 37.9
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 6.9e-09 64.7 102 39.2
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.5e-08 62.0 81 48.1
HPP92_009584 Vanilla planifolia HOM05D007629 ORTHO05D009511 7.2e-06 54.7 132 31.1


User provided reference genes

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