Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 7.2e-90 334.0 177 100.0
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 1.1e-82 310.1 177 93.2
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 7.2e-82 307.4 177 93.8
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.5e-63 246.5 178 80.3
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 9.8e-63 243.8 177 78.5
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 1.6e-44 183.3 123 80.5
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.8e-40 169.9 109 84.4
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 1.6e-36 156.8 187 54.0
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 1.4e-32 143.7 187 50.8
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 3.1e-32 142.5 174 51.1
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 9.0e-32 141.0 182 52.2
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 3.4e-31 139.0 175 50.3
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 2.9e-30 136.0 178 47.8
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 8.4e-30 134.4 181 50.8
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 3.2e-29 132.5 181 49.7
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 5.4e-29 131.7 177 51.4
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 5.4e-29 131.7 186 50.5
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 7.1e-29 131.3 173 50.3
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 9.3e-29 131.0 185 46.5
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 1.2e-28 130.6 177 50.3
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 1.6e-28 130.2 196 47.4
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 2.1e-28 129.8 173 48.0
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 6.0e-28 128.3 176 53.4
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 7.9e-28 127.9 114 61.4
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 1.8e-27 126.7 179 48.6
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 2.3e-27 126.3 176 46.0
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 2.3e-27 126.3 175 46.3
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 2.3e-27 126.3 173 50.3
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 3.0e-27 125.9 173 49.7
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.9e-27 125.6 177 47.5
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 5.1e-27 125.2 178 44.4
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 5.1e-27 125.2 175 46.3
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 1.5e-26 123.6 176 48.3
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.3e-26 122.5 176 47.7
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 4.3e-26 122.1 174 44.8
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 7.4e-26 121.3 118 55.1
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 9.6e-26 120.9 172 49.4
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 2.8e-25 119.4 172 45.3
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 2.8e-25 119.4 175 47.4
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 3.7e-25 119.0 177 46.9
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 3.7e-25 119.0 118 55.1
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 4.8e-25 118.6 170 46.5
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 8.1e-25 117.9 173 48.0
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 8.1e-25 117.9 177 46.3
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 1.1e-24 117.5 176 43.2
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.4e-24 117.1 173 46.8
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 1.4e-24 117.1 118 54.2
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 1.8e-24 116.7 172 50.0
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.8e-24 116.7 166 47.0
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.8e-24 116.7 162 48.8
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 1.8e-24 116.7 173 46.2
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 1.8e-24 116.7 117 55.6
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 4.0e-24 115.5 98 63.3
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 6.9e-24 114.8 126 54.8
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 1.2e-23 114.0 174 44.3
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.2e-23 114.0 176 46.6
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 1.5e-23 113.6 173 45.7
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 1.5e-23 113.6 176 46.6
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 2.0e-23 113.2 177 47.5
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 2.6e-23 112.8 104 60.6
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 4.5e-23 112.1 174 43.1
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 1.3e-22 110.5 106 62.3
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 1.7e-22 110.2 161 46.6
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.7e-22 110.2 108 56.5
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 2.2e-22 109.8 168 45.2
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 2.9e-22 109.4 168 46.4
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 3.8e-22 109.0 174 42.5
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 3.8e-22 109.0 180 45.0
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 4.9e-22 108.6 163 48.5
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 8.4e-22 107.8 154 47.4
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 8.4e-22 107.8 174 44.8
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 1.4e-21 107.1 177 46.9
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 1.9e-21 106.7 137 47.4
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 1.9e-21 106.7 174 42.5
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 3.2e-21 105.9 174 43.1
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 4.2e-21 105.5 174 42.0
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 4.2e-21 105.5 96 59.4
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 7.1e-21 104.8 176 43.8
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 7.1e-21 104.8 176 43.8
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 9.3e-21 104.4 144 49.3
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 9.3e-21 104.4 103 59.2
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 9.3e-21 104.4 175 44.0
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 1.2e-20 104.0 174 42.5
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.6e-20 103.6 176 40.9
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 2.7e-20 102.8 180 43.3
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 3.5e-20 102.4 178 44.4
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 4.6e-20 102.1 174 40.8
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 4.6e-20 102.1 174 40.8
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 7.9e-20 101.3 95 60.0
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 1.3e-19 100.5 186 39.8
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 1.3e-19 100.5 183 41.5
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 2.3e-19 99.8 155 41.9
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 6.7e-19 98.2 176 39.8
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 1.1e-18 97.4 103 55.3
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 3.3e-18 95.9 103 51.5
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 2.1e-17 93.2 158 43.0
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 2.8e-17 92.8 166 43.4
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 1.1e-16 90.9 102 50.0
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 2.6e-15 86.3 82 53.7
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 2.2e-14 83.2 146 42.5
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.2e-14 83.2 159 41.5
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 3.8e-14 82.4 73 57.5
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 5.0e-14 82.0 115 45.2
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 1.1e-13 80.9 174 34.5
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 2.5e-13 79.7 59 66.1
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 9.3e-13 77.8 81 55.6
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 6.1e-12 75.1 88 52.3
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.3e-11 73.9 170 35.9
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 1.3e-11 73.9 88 54.5
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 5.9e-07 58.5 178 31.5
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.2e-06 56.6 45 53.3


User provided reference genes

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