Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006633 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.2e-112 409.8 200 100.0
Sopen02g016420 Solanum pennellii HOM05D010354 ORTHO05D012840 1.9e-94 349.4 205 86.3
PGSC0003DMG400006632 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.6e-77 293.1 204 75.5
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 1.9e-38 163.3 192 48.4
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 2.9e-34 149.4 190 44.7
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 6.4e-34 148.3 160 51.9
Nitab4.5_0004672g0020 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.7e-31 140.2 129 57.4
Peaxi162Scf00045g00639 Petunia axillaris HOM05D010354 ORTHO05D012840 7.5e-27 124.8 142 45.8
CAN.G1522.9 Capsicum annuum HOM05D010354 ORTHO05D012840 1.4e-25 120.6 126 50.8
Nitab4.5_0000556g0100 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.4e-25 120.6 202 43.1
Nitab4.5_0000274g0270 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.6e-24 117.1 182 43.4
Sopen08g001170 Solanum pennellii HOM05D010354 ORTHO05D012840 1.7e-23 113.6 197 40.6
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 8.6e-23 111.3 177 41.2
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 1.8e-20 103.6 170 41.8
Peaxi162Scf00045g00631 Petunia axillaris HOM05D010354 ORTHO05D012840 4.1e-17 92.4 91 49.5
Peaxi162Scf00045g00634 Petunia axillaris HOM05D010354 ORTHO05D012840 9.2e-17 91.3 96 47.9
CAN.G1103.3 Capsicum annuum HOM05D010354 ORTHO05D012840 6.0e-16 88.6 64 67.2
Nitab4.5_0010737g0020 Nicotiana tabacum HOM05D010354 ORTHO05D012840 3.6e-13 79.3 96 43.8
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.1e-12 76.3 145 39.3
CAN.G128.119 Capsicum annuum HOM05D001907 ORTHO05D015557 4.0e-12 75.9 152 38.8
CAN.G128.124 Capsicum annuum HOM05D001907 ORTHO05D015557 4.0e-12 75.9 152 38.8
CAN.G128.123 Capsicum annuum HOM05D001907 ORTHO05D015557 6.8e-12 75.1 152 38.8
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 6.8e-12 75.1 118 39.8
CAN.G3720.1 Capsicum annuum HOM05D010354 ORTHO05D015557 8.9e-12 74.7 152 38.8
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.6e-11 73.2 143 34.3
Rhsim06G0038400 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.9e-10 69.7 127 32.3
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.4e-10 68.2 118 36.4
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.4e-09 67.4 139 34.5
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.1e-08 63.5 127 33.9
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 2.1e-08 63.5 114 33.3
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 2.7e-08 63.2 114 33.3
arahy.Tifrunner.gnm1.ann1.VD3B34 Arachis hypogaea HOM05D010841 ORTHO05D007789 2.7e-08 63.2 117 34.2
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 2.7e-08 63.2 124 30.6
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.7e-08 63.2 122 32.0
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-08 62.8 154 28.6
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.6e-08 62.4 119 31.1
arahy.Tifrunner.gnm1.ann1.M6PJBU Arachis hypogaea HOM05D010841 ORTHO05D007789 6.0e-08 62.0 121 33.1
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 7.8e-08 61.6 117 34.2
arahy.Tifrunner.gnm1.ann1.73MM12 Arachis hypogaea HOM05D010841 ORTHO05D007789 1.0e-07 61.2 121 33.1
Nitab4.5_0000613g0240 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.3e-07 60.8 58 55.2
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 3.0e-07 59.7 117 33.3
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 3.9e-07 59.3 130 33.8
Nitab4.5_0003217g0050 Nicotiana tabacum HOM05D008744 ORTHO05D015557 5.1e-07 58.9 99 37.4
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 5.1e-07 58.9 119 28.6
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-06 57.8 141 30.5
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-06 57.8 151 32.5
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-06 57.8 141 30.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-06 57.8 140 35.0
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.1e-06 57.8 86 40.7
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 1.1e-06 57.8 145 35.2
arahy.Tifrunner.gnm1.ann1.6MMZ8L Arachis hypogaea HOM05D010841 ORTHO05D007789 1.5e-06 57.4 98 32.7
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 2.5e-06 56.6 129 38.0
Rhsim12G0082100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-06 56.2 127 28.3
Sed0024472 Sechium edule HOM05D034586 ORTHO05D007789 9.6e-06 54.7 139 30.9


User provided reference genes

Program Settings