Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 6.2e-132 474.2 247 100.0
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 6.3e-124 447.6 247 95.5
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 6.3e-124 447.6 247 95.5
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 2.2e-108 396.0 247 86.6
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 1.6e-98 363.2 243 79.8
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 1.6e-98 363.2 243 82.3
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 4.5e-98 361.7 244 79.5
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 2.0e-66 256.5 247 61.1
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 1.3e-65 253.8 251 58.2
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 5.0e-65 251.9 246 58.9
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 5.6e-64 248.4 250 58.4
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 1.2e-63 247.3 250 59.2
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 8.1e-63 244.6 247 57.5
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 7.5e-61 238.0 251 57.4
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 7.5e-61 238.0 251 57.4
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 4.9e-60 235.3 247 55.9
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 8.3e-60 234.6 246 55.3
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 2.4e-59 233.0 246 56.1
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 4.6e-58 228.8 285 49.8
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 2.5e-56 223.0 250 54.0
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 6.8e-54 214.9 248 54.4
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 6.8e-54 214.9 248 54.4
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 8.9e-54 214.5 254 53.1
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 1.5e-53 213.8 252 55.2
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 3.4e-53 212.6 251 53.8
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 2.4e-51 206.5 251 54.2
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 7.1e-51 204.9 247 51.0
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 9.2e-51 204.5 261 51.0
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 1.3e-49 200.7 250 50.8
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.5e-48 197.2 246 51.2
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 2.1e-47 193.4 247 50.6
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 3.6e-47 192.6 247 52.6
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 2.4e-46 189.9 252 51.2
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 2.4e-46 189.9 254 50.8
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 8.9e-46 188.0 252 50.0
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 2.0e-45 186.8 254 50.8
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 2.6e-45 186.4 251 50.2
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 2.6e-45 186.4 254 50.4
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 4.4e-45 185.7 248 48.4
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 4.4e-45 185.7 254 50.4
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 7.6e-45 184.9 252 48.0
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 2.2e-44 183.3 245 47.8
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.1e-43 181.0 173 61.3
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 1.9e-43 180.3 251 47.8
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 2.4e-43 179.9 204 53.4
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 2.4e-43 179.9 247 49.0
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 7.1e-43 178.3 252 48.4
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.1e-43 178.3 251 47.8
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 9.3e-43 177.9 251 48.2
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 1.2e-42 177.6 249 47.8
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.6e-42 177.2 250 48.0
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.6e-42 177.2 247 49.0
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.7e-42 176.4 252 48.8
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 2.7e-42 176.4 252 48.4
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.6e-42 175.6 249 47.8
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 6.0e-42 175.3 249 47.8
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.8e-42 174.9 250 47.6
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 3.9e-41 172.6 252 47.6
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 1.1e-40 171.0 252 46.4
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 3.3e-40 169.5 250 46.8
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.4e-38 164.1 249 46.2
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.8e-38 163.7 142 61.3
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 5.3e-38 162.2 248 47.2
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 2.0e-37 160.2 249 42.2
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 2.6e-37 159.8 249 42.2
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 9.9e-37 157.9 252 44.0
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 1.3e-36 157.5 249 44.2
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 6.4e-36 155.2 251 45.0
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 6.4e-36 155.2 244 44.3
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 1.9e-35 153.7 251 43.8
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 3.2e-35 152.9 205 49.3
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 7.1e-35 151.8 252 42.5
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 1.6e-34 150.6 251 44.2
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 1.6e-34 150.6 251 44.2
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 2.1e-34 150.2 253 43.5
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.1e-34 150.2 255 43.5
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 3.5e-34 149.4 251 42.6
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 4.6e-34 149.1 251 42.2
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.0e-33 147.9 250 42.8
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 1.7e-33 147.1 250 44.8
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.9e-33 146.0 256 42.6
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 6.6e-33 145.2 251 44.6
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 3.3e-32 142.9 249 42.6
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 2.1e-31 140.2 251 43.4
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 2.8e-31 139.8 251 43.8
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 4.8e-31 139.0 251 41.8
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 8.1e-31 138.3 248 41.9
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 4.5e-29 132.5 250 40.8
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 4.5e-29 132.5 251 42.6
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 1.1e-27 127.9 214 42.1
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 1.4e-27 127.5 249 41.8
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 1.9e-27 127.1 200 42.5
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.3e-25 120.2 266 39.1
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 3.0e-25 119.8 267 34.8
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 3.0e-25 119.8 259 35.9
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 3.7e-23 112.8 254 36.6
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 3.7e-23 112.8 254 36.6
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 8.1e-23 111.7 254 37.8
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 1.1e-22 111.3 254 36.2
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 3.1e-22 109.8 254 37.0
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 3.1e-22 109.8 254 36.6
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 5.3e-22 109.0 257 35.4
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 5.3e-22 109.0 257 35.4
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 9.0e-22 108.2 256 35.2
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 1.7e-20 104.0 247 31.6
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 9.3e-19 98.2 256 33.6
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 1.3e-17 94.4 181 35.9
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 7.4e-16 88.6 118 48.3
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 3.7e-15 86.3 217 33.2
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 4.8e-15 85.9 154 40.3
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 1.1e-14 84.7 245 32.7
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.1e-14 84.7 188 37.8
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 5.3e-14 82.4 206 32.0
Actinidia30732 Actinidia chinensis HOM05D005720 ORTHO05D006984 7.4e-08 62.0 169 36.1
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 7.4e-08 62.0 66 51.5


User provided reference genes

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