Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006521 Solanum tuberosum HOM05D008381 ORTHO05D004636 5.3e-181 637.5 308 100.0
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 2.4e-24 117.1 244 29.9
Nitab4.5_0003210g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.6e-20 104.4 239 28.9
Peaxi162Scf00022g00105 Petunia axillaris HOM05D005774 ORTHO05D004636 1.6e-20 104.4 175 34.3
Peaxi162Scf00170g00710 Petunia axillaris HOM05D005774 ORTHO05D006516 4.7e-20 102.8 118 45.8
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.3e-19 100.5 209 32.5
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 5.2e-19 99.4 181 37.0
Nitab4.5_0000643g0030 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.2e-18 98.2 181 35.4
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.5e-18 97.8 221 28.1
Nitab4.5_0001055g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.4e-18 96.7 153 35.3
CAN.G170.3 Capsicum annuum HOM05D000003 ORTHO05D000022 7.5e-18 95.5 128 41.4
QL02p058259 Quercus lobata HOM05D000155 ORTHO05D000022 2.2e-17 94.0 267 30.7
QL93p0100_0664 Quercus lobata HOM05D000155 ORTHO05D000022 2.2e-17 94.0 267 30.7
Nitab4.5_0004525g0080 Nicotiana tabacum HOM05D009389 ORTHO05D012243 6.4e-17 92.4 210 27.6
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 8.3e-17 92.0 191 32.5
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 7.0e-16 89.0 274 27.4
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 7.0e-16 89.0 246 25.6
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 1.6e-15 87.8 165 33.9
Nitab4.5_0008724g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 2.1e-15 87.4 136 39.0
EL10Ac1g02112 Beta vulgaris HOM05D000003 ORTHO05D000006 1.0e-14 85.1 204 28.9
Peaxi162Scf00019g01511 Petunia axillaris HOM05D008381 ORTHO05D004636 1.3e-14 84.7 170 30.0
Solyc05g039970.1 Solanum lycopersicum HOM05D008381 ORTHO05D004636 2.3e-14 84.0 196 29.1
EL10Ac6g13741 Beta vulgaris HOM05D008685 ORTHO05D000022 3.9e-14 83.2 131 34.4
Nitab4.5_0007709g0030 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.9e-14 83.2 123 36.6
Nitab4.5_0005760g0010 Nicotiana tabacum HOM05D000003 ORTHO05D004636 6.6e-14 82.4 118 37.3
EL10Ac3g05611 Beta vulgaris HOM05D000003 ORTHO05D000022 1.5e-13 81.3 257 27.2
AUR62014610 Chenopodium quinoa HOM05D000003 ORTHO05D011948 1.5e-13 81.3 182 30.2
Peaxi162Scf00100g00073 Petunia axillaris HOM05D008381 ORTHO05D004636 1.5e-13 81.3 148 34.5
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-13 80.5 222 27.9
Nitab4.5_0002028g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.3e-13 80.1 121 39.7
Nitab4.5_0003763g0070 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.3e-13 80.1 148 31.1
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 3.3e-13 80.1 214 27.1
Peaxi162Scf00842g00432 Petunia axillaris HOM05D005774 ORTHO05D006516 4.3e-13 79.7 198 29.8
Nitab4.5_0004988g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.6e-13 79.3 214 27.6
Peaxi162Scf00000g56011 Petunia axillaris HOM05D008306 ORTHO05D004636 5.6e-13 79.3 229 25.8
Peaxi162Scf00422g00049 Petunia axillaris HOM05D005774 ORTHO05D006516 5.6e-13 79.3 100 43.0
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-12 77.8 224 26.8
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 2.8e-12 77.0 231 27.7
Nitab4.5_0000574g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.6e-12 76.6 129 36.4
Peaxi162Scf00577g00023 Petunia axillaris HOM05D008381 ORTHO05D004636 3.6e-12 76.6 67 50.7
Nitab4.5_0000411g0070 Nicotiana tabacum HOM05D000003 ORTHO05D004636 8.1e-12 75.5 164 32.3
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-11 74.7 225 27.1
Nitab4.5_0000197g0070 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.4e-11 74.7 187 28.9
Nitab4.5_0000297g0200 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.8e-11 74.3 70 47.1
Nitab4.5_0001151g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.8e-11 74.3 71 47.9
EL10Ac4g08331 Beta vulgaris HOM05D008685 ORTHO05D000022 2.3e-11 73.9 78 41.0
CAN.G184.21 Capsicum annuum HOM05D000312 ORTHO05D011153 4.0e-11 73.2 148 30.4
AUR62005088 Chenopodium quinoa HOM05D000157 ORTHO05D020420 4.0e-11 73.2 180 32.2
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-11 73.2 267 25.1
Nitab4.5_0006529g0030 Nicotiana tabacum HOM05D014783 ORTHO05D004636 8.9e-11 72.0 157 31.8
Peaxi162Scf00750g00049 Petunia axillaris HOM05D005774 ORTHO05D006516 8.9e-11 72.0 75 48.0
Nitab4.5_0003682g0060 Nicotiana tabacum HOM05D012456 ORTHO05D012243 1.2e-10 71.6 111 35.1
QL02p092030 Quercus lobata HOM05D000003 ORTHO05D000022 1.2e-10 71.6 146 31.5
Peaxi162Scf00794g00315 Petunia axillaris HOM05D005774 ORTHO05D006516 5.8e-10 69.3 161 29.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 7.5e-10 68.9 161 31.7
PSO541G2390 Papaver somniferum HOM05D003407 ORTHO05D001026 9.9e-10 68.6 182 25.3
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 1.3e-09 68.2 279 25.4
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 2.2e-09 67.4 196 28.1
FvH4_5g27995 Fragaria vesca HOM05D000003 ORTHO05D000022 2.2e-09 67.4 169 30.2
Nitab4.5_0003252g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.2e-09 67.4 115 33.0
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 2.9e-09 67.0 159 25.8
Nitab4.5_0001962g0120 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.7e-09 66.6 168 27.4
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-09 66.2 238 25.2
Nitab4.5_0000433g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.9e-09 66.2 75 41.3
LjContig00408g0000741 Lotus japonicus HOM05D000003 ORTHO05D001390 8.3e-09 65.5 175 30.3
Peaxi162Scf00039g00811 Petunia axillaris HOM05D005774 ORTHO05D006516 8.3e-09 65.5 93 40.9
EL10Ac1g01517 Beta vulgaris HOM05D014031 ORTHO05D000022 1.4e-08 64.7 168 30.4
EL10As2g23251 Beta vulgaris HOM05D007742 ORTHO05D004072 1.4e-08 64.7 196 27.0
AUR62033970 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.9e-08 64.3 140 32.9
Nitab4.5_0002189g0010 Nicotiana tabacum HOM05D000067 ORTHO05D004636 1.9e-08 64.3 125 29.6
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 1.9e-08 64.3 159 30.8
AUR62041309 Chenopodium quinoa HOM05D000003 ORTHO05D000007 2.4e-08 63.9 179 29.1
COL.COLO4_23635 Corchorus olitorius HOM05D000155 ORTHO05D000022 2.4e-08 63.9 170 28.2
Nitab4.5_0000151g0030 Nicotiana tabacum HOM05D000003 ORTHO05D004636 2.4e-08 63.9 101 39.6
EL10Ac2g04336 Beta vulgaris HOM05D008685 ORTHO05D000022 3.2e-08 63.5 136 30.9
CAN.G459.19 Capsicum annuum HOM05D000010 ORTHO05D000063 3.2e-08 63.5 82 37.8
FvH4_3g30492 Fragaria vesca HOM05D000003 ORTHO05D000022 3.2e-08 63.5 165 28.5
Lj5g0005529 Lotus japonicus HOM05D000003 ORTHO05D000022 4.1e-08 63.2 198 26.8
PSO339G3346 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-08 63.2 141 31.9
Atru.chr11.757 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-08 62.8 253 24.5
PSO133G0054 Papaver somniferum HOM05D000003 ORTHO05D000004 5.4e-08 62.8 130 30.8
QL04p014896 Quercus lobata HOM05D000003 ORTHO05D000022 5.4e-08 62.8 120 30.8
Nitab4.5_0001319g0060 Nicotiana tabacum HOM05D011052 ORTHO05D004636 7.1e-08 62.4 154 28.6
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-08 62.0 149 27.5
Aqoxy4G00752 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 9.2e-08 62.0 201 26.9
Nitab4.5_0000163g0160 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.2e-07 61.6 130 32.3
Cpa.g.sc19.281 Carica papaya HOM05D000003 ORTHO05D000022 1.6e-07 61.2 129 27.9
Nitab4.5_0000801g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-07 61.2 71 42.3
Nitab4.5_0001468g0150 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.6e-07 61.2 120 35.0
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 1.6e-07 61.2 226 24.3
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 60.8 229 24.5
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-07 60.8 194 24.7
Lj4g0002254 Lotus japonicus HOM05D000003 ORTHO05D000022 2.1e-07 60.8 68 44.1
PSO210G1343 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-07 60.8 160 25.6
PGSC0003DMG400029540 Solanum tuberosum HOM05D008306 ORTHO05D004636 2.1e-07 60.8 76 40.8
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 60.5 199 26.6
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 2.7e-07 60.5 121 32.2
Hma1.2p1_0020F.1_g014240 Hydrangea macrophylla HOM05D000003 ORTHO05D000167 2.7e-07 60.5 125 30.4
Nitab4.5_0007164g0040 Nicotiana tabacum HOM05D014268 ORTHO05D014203 2.7e-07 60.5 112 33.0
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 3.5e-07 60.1 163 30.1
PSO541G1607 Papaver somniferum HOM05D000003 ORTHO05D001026 3.5e-07 60.1 185 27.0
QL11p015220 Quercus lobata HOM05D000021 ORTHO05D000010 3.5e-07 60.1 101 37.6
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 4.6e-07 59.7 155 27.1
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.6e-07 59.7 205 26.8
Nitab4.5_0001627g0020 Nicotiana tabacum HOM05D011052 ORTHO05D004636 4.6e-07 59.7 110 32.7
Nitab4.5_0001828g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 4.6e-07 59.7 76 38.2
Nitab4.5_0007929g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.6e-07 59.7 83 39.8
Peaxi162Scf00350g00110 Petunia axillaris HOM05D013830 ORTHO05D004636 4.6e-07 59.7 139 26.6
SGA_v2.0_scaffold245G44722 Striga asiatica HOM05D000155 ORTHO05D000022 4.6e-07 59.7 132 31.8
Aqoxy2G02424 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 6.0e-07 59.3 104 33.7
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.0e-07 59.3 160 29.4
Lj6g0012103 Lotus japonicus HOM05D000155 ORTHO05D000022 6.0e-07 59.3 145 31.0
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 6.0e-07 59.3 184 28.8
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 6.0e-07 59.3 210 26.7
PGSC0003DMG400033083 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.0e-07 59.3 72 44.4
Atru.chr13.1294 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-07 58.9 120 30.8
AUR62043782 Chenopodium quinoa HOM05D008685 ORTHO05D000022 7.8e-07 58.9 84 41.7
Aqoxy1G03382 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 1.0e-06 58.5 137 28.5
PSO339G4890 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-06 58.5 163 31.9
Atru.chr4.1146 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 58.2 153 27.5
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.3e-06 58.2 97 36.1
Nitab4.5_0003182g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.3e-06 58.2 99 33.3
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-06 58.2 233 26.6
RcHm_v2.0_Chr3g0463661 Rosa chinensis HOM05D009383 ORTHO05D011656 1.3e-06 58.2 91 38.5
RcHm_v2.0_Chr7g0200931 Rosa chinensis HOM05D000003 ORTHO05D000022 1.7e-06 57.8 233 24.9
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-06 57.4 184 25.0
Nitab4.5_0004031g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.3e-06 57.4 136 32.4
Nitab4.5_0007941g0040 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.3e-06 57.4 109 31.2
CANSAT01G2388 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-06 57.0 271 24.7
Lj7C251G10 Lonicera japonica HOM05D000003 ORTHO05D000006 3.0e-06 57.0 105 38.1
Nitab4.5_0001175g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.0e-06 57.0 145 31.0
Peaxi162Scf00618g00023 Petunia axillaris HOM05D005774 ORTHO05D006516 3.0e-06 57.0 80 36.2
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 3.9e-06 56.6 144 27.8
EL10Ac2g03336 Beta vulgaris HOM05D014031 ORTHO05D000022 3.9e-06 56.6 121 28.9
CAN.G504.48 Capsicum annuum HOM05D005774 ORTHO05D004636 3.9e-06 56.6 76 35.5
FvH4_2g13902 Fragaria vesca HOM05D012422 ORTHO05D012874 3.9e-06 56.6 155 26.5
Lj4g0004526 Lotus japonicus HOM05D000003 ORTHO05D000022 3.9e-06 56.6 71 39.4
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 3.9e-06 56.6 72 44.4
QL07p021184 Quercus lobata HOM05D000003 ORTHO05D000022 3.9e-06 56.6 102 35.3
Atru.chr4.1862 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-06 56.2 156 28.2
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.1e-06 56.2 134 32.1
PSO782G2775 Papaver somniferum HOM05D000003 ORTHO05D000004 5.1e-06 56.2 139 24.5
QL03p040997 Quercus lobata HOM05D044001 ORTHO05D000022 5.1e-06 56.2 171 28.1
QL10p052676 Quercus lobata HOM05D000003 ORTHO05D000167 5.1e-06 56.2 200 24.0
FvH4_4g18821 Fragaria vesca HOM05D000003 ORTHO05D000006 6.6e-06 55.8 115 28.7
FvH4_4g22411 Fragaria vesca HOM05D021063 ORTHO05D010662 6.6e-06 55.8 202 27.7
FvH4_5g30171 Fragaria vesca HOM05D000003 ORTHO05D000006 6.6e-06 55.8 161 27.3
Nitab4.5_0006077g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 6.6e-06 55.8 56 46.4
RcHm_v2.0_Chr1g0346251 Rosa chinensis HOM05D000003 ORTHO05D000004 6.6e-06 55.8 125 26.4
SEGI_10930 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 6.6e-06 55.8 73 37.0
AUR62014692 Chenopodium quinoa HOM05D000155 ORTHO05D000022 8.6e-06 55.5 70 40.0
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 8.6e-06 55.5 169 24.3
Nitab4.5_0002978g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 8.6e-06 55.5 68 41.2
PSO832G3671 Papaver somniferum HOM05D000003 ORTHO05D001026 8.6e-06 55.5 271 25.5
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 8.6e-06 55.5 150 28.7
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 8.6e-06 55.5 150 28.7
RcHm_v2.0_Chr2g0132921 Rosa chinensis HOM05D000003 ORTHO05D000022 8.6e-06 55.5 129 30.2


User provided reference genes

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