Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.7e-199 699.1 358 100.0
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 2.0e-192 675.6 358 96.1
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 8.6e-191 670.2 358 95.5
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 4.6e-176 621.3 358 88.0
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-167 593.2 358 84.9
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.0e-151 540.4 359 78.3
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 5.1e-151 538.1 354 78.5
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 2.8e-149 532.3 365 75.3
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 5.3e-148 528.1 358 75.4
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 1.3e-146 523.5 367 74.7
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 6.5e-146 521.2 363 73.8
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 4.2e-145 518.5 281 91.1
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 5.5e-145 518.1 358 74.3
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 7.9e-144 514.2 358 73.7
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 3.3e-142 508.8 356 74.4
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 9.7e-142 507.3 359 73.8
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 9.7e-142 507.3 343 76.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.6e-141 506.5 337 76.0
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 4.8e-141 505.0 333 76.9
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 6.3e-141 504.6 347 75.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.8e-140 503.1 302 81.8
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 5.3e-140 501.5 317 80.8
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.2e-139 500.4 363 71.9
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 2.2e-138 496.1 357 71.1
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.9e-138 495.7 317 77.3
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 2.9e-138 495.7 364 70.6
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 2.9e-138 495.7 377 70.8
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.9e-138 495.7 328 76.2
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 3.8e-138 495.4 365 70.7
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 6.5e-138 494.6 317 77.9
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 6.5e-138 494.6 347 73.5
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.1e-137 493.8 366 69.7
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.1e-137 493.8 317 76.7
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.4e-137 493.4 365 70.7
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 7.2e-137 491.1 348 70.4
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 3.6e-136 488.8 314 77.1
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 3.6e-136 488.8 363 70.0
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.0e-135 487.3 318 76.7
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.3e-135 486.9 366 69.7
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 3.0e-135 485.7 325 75.4
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 5.1e-135 485.0 325 75.7
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 5.1e-135 485.0 357 70.6
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 6.7e-135 484.6 362 71.8
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.1e-134 483.8 368 69.8
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.1e-134 483.8 359 70.2
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 1.9e-134 483.0 304 78.6
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 3.3e-134 482.3 326 74.5
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 3.3e-134 482.3 361 68.7
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 4.3e-134 481.9 304 77.6
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 5.7e-134 481.5 306 79.1
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 9.7e-134 480.7 325 74.8
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.3e-133 480.3 332 75.3
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 2.2e-133 479.6 363 69.7
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.1e-132 477.2 320 75.0
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.4e-132 476.1 360 69.2
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.1e-132 475.7 334 72.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 4.1e-132 475.3 368 68.2
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 4.1e-132 475.3 364 69.2
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 9.1e-132 474.2 310 75.8
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.2e-131 473.8 336 72.0
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 1.2e-131 473.8 310 75.8
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 1.5e-131 473.4 357 69.7
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 1.5e-131 473.4 316 75.9
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.0e-131 473.0 336 71.7
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 7.7e-131 471.1 421 63.9
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.7e-130 469.9 364 67.3
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 5.0e-130 468.4 364 67.9
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 2.5e-129 466.1 301 76.4
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.5e-129 466.1 341 71.0
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 3.2e-129 465.7 313 74.4
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 4.2e-129 465.3 309 75.4
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 4.2e-129 465.3 309 75.4
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 3.6e-128 462.2 347 68.6
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 7.9e-128 461.1 320 74.1
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 4.4e-126 455.3 297 76.8
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.3e-125 453.8 303 74.3
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.4e-124 450.3 285 77.2
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.2e-123 447.2 358 65.4
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 5.2e-119 431.8 300 71.7
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 2.2e-117 426.4 441 54.6
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 4.1e-116 422.2 299 70.2
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 5.3e-116 421.8 302 70.5
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 2.6e-115 419.5 307 69.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.5e-115 419.1 306 68.6
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.2e-112 410.6 356 60.7
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.6e-112 410.2 509 49.1
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 2.1e-112 409.8 300 68.7
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.3e-110 402.5 288 69.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 6.1e-104 381.7 458 48.7
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 8.8e-103 377.9 289 68.5
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 3.5e-99 365.9 305 62.6
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.5e-99 365.9 212 84.9
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.2e-91 340.9 217 78.8
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.5e-86 323.9 335 54.6
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 3.4e-86 322.8 200 80.0
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 7.5e-86 321.6 311 55.9
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 1.9e-81 307.0 170 90.0
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.4e-76 290.8 248 63.3
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.2e-76 289.7 203 72.9
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.0e-76 288.5 248 62.9
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 3.0e-74 283.1 166 83.1
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 9.5e-73 278.1 257 52.9
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 2.8e-72 276.6 357 48.2
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.8e-71 273.9 194 72.2
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.0e-71 272.7 194 71.6
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.0e-70 270.4 189 74.1
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 2.9e-69 266.5 167 79.6
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.0e-67 258.8 149 84.6
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 5.4e-60 235.7 144 75.7
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 9.2e-60 235.0 259 48.3
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.5e-59 233.0 188 64.4
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.3e-58 230.3 213 60.1
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.9e-53 213.4 141 73.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.3e-40 171.4 108 77.8
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.1e-36 158.3 97 74.2
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 3.1e-31 140.2 238 35.7
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 6.9e-31 139.0 144 55.6
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.9e-29 133.7 145 54.5
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.2e-24 115.5 102 54.9
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.4e-23 114.0 258 32.9
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 5.3e-15 86.3 49 75.5
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.6e-11 73.6 58 63.8
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 1.7e-08 64.7 71 49.3


User provided reference genes

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