Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 1.4e-207 726.1 369 100.0
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 5.9e-195 684.1 416 85.8
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 6.6e-194 680.6 416 85.6
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 7.0e-180 634.0 416 80.5
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 2.5e-177 625.5 421 78.9
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.4e-172 609.8 445 73.7
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 1.1e-159 567.0 431 72.9
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 1.9e-129 466.5 314 74.2
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 2.2e-128 463.0 320 74.1
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 1.5e-126 456.8 414 59.7
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 1.1e-124 450.7 412 60.0
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 1.4e-124 450.3 404 60.6
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 6.1e-123 444.9 414 59.4
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 8.8e-122 441.0 311 73.0
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 9.7e-121 437.6 414 57.0
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 9.7e-121 437.6 417 57.3
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 2.8e-120 436.0 414 57.7
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 3.7e-120 435.6 418 58.4
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 6.3e-120 434.9 407 59.0
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 3.4e-118 429.1 412 58.7
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 2.2e-117 426.4 410 57.6
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 2.5e-116 422.9 425 55.8
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 3.6e-115 419.1 417 56.4
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 4.7e-115 418.7 410 56.8
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 6.1e-115 418.3 315 69.2
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 1.0e-114 417.5 417 56.4
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 3.9e-114 415.6 411 56.7
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 8.8e-114 414.5 315 65.4
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 1.5e-113 413.7 416 55.3
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.7e-113 411.8 417 55.9
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 7.4e-113 411.4 315 63.8
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.3e-112 410.6 315 63.8
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 1.3e-112 410.6 312 63.8
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 2.2e-112 409.8 406 56.4
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 2.8e-112 409.5 254 80.3
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 1.8e-111 406.8 370 57.8
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 5.3e-111 405.2 315 62.9
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 5.3e-111 405.2 408 55.6
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 5.3e-111 405.2 372 58.3
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 7.0e-111 404.8 415 54.9
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 1.5e-110 403.7 368 61.4
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 5.9e-110 401.7 406 53.7
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 2.9e-109 399.4 402 54.5
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.9e-108 396.7 402 56.2
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 5.5e-108 395.2 404 54.2
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 1.0e-106 391.0 405 54.1
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.0e-106 389.4 395 55.4
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 6.7e-106 388.3 384 55.7
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.1e-105 387.5 414 51.4
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 1.5e-105 387.1 472 49.2
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 2.0e-105 386.7 367 58.0
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 8.2e-104 381.3 323 60.1
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 2.4e-103 379.8 310 60.3
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 2.4e-103 379.8 308 60.4
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 9.1e-103 377.9 310 60.6
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 9.1e-103 377.9 423 53.7
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 3.5e-102 375.9 313 65.2
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 7.7e-102 374.8 418 53.1
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 1.0e-101 374.4 412 52.4
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.2e-101 373.2 411 52.1
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 6.5e-101 371.7 450 48.9
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 1.5e-100 370.5 366 54.6
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 9.4e-100 367.9 364 53.6
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 2.7e-99 366.3 311 60.8
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 2.7e-99 366.3 407 50.4
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 3.0e-98 362.8 405 51.6
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 4.0e-98 362.5 327 57.8
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 6.8e-98 361.7 384 50.5
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 5.7e-97 358.6 400 50.2
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 1.4e-95 354.0 355 55.5
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 4.1e-95 352.4 405 51.6
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 9.1e-95 351.3 405 49.1
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 3.5e-94 349.4 312 60.9
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 3.8e-93 345.9 368 53.3
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 3.8e-93 345.9 367 53.4
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 1.9e-92 343.6 423 50.4
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 2.1e-91 340.1 407 49.6
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 1.0e-90 337.8 318 56.9
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 4.0e-90 335.9 411 47.9
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 4.0e-90 335.9 400 52.5
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 4.4e-89 332.4 291 57.7
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 7.5e-89 331.6 358 53.1
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 2.2e-88 330.1 405 47.9
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 4.1e-87 325.9 404 48.0
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 5.4e-87 325.5 403 48.1
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 9.1e-87 324.7 404 47.8
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 7.7e-86 321.6 363 49.6
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 2.9e-85 319.7 413 47.2
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 8.0e-83 311.6 242 64.5
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 2.3e-82 310.1 417 46.3
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 5.2e-82 308.9 315 50.8
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 3.7e-80 302.8 336 51.5
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 9.2e-79 298.1 400 46.5
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 5.6e-76 288.9 191 73.8
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 8.0e-75 285.0 340 50.3
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 1.3e-72 277.7 414 41.8
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.0e-69 268.1 219 60.7
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 1.7e-64 250.8 314 47.1
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 2.2e-64 250.4 416 42.3
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 3.3e-60 236.5 166 65.7
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 1.6e-51 207.6 327 37.3
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 1.7e-48 197.6 259 42.5
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 4.9e-48 196.1 333 36.9
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 4.0e-42 176.4 111 74.8
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 9.9e-41 171.8 111 72.1
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.7e-40 171.0 152 59.2
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.5e-38 163.3 129 62.0
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 4.6e-38 162.9 151 58.9
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.7e-37 161.0 198 50.5
Actinidia20510 Actinidia chinensis HOM05D006199 ORTHO05D006558 4.2e-31 139.8 105 68.6
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 5.1e-29 132.9 129 53.5
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 2.1e-27 127.5 198 35.4
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 6.0e-22 109.4 220 31.8
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-21 107.8 77 62.3
BcaB01g02961 Brassica carinata HOM05D006199 ORTHO05D006558 3.9e-21 106.7 124 45.2
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 4.3e-20 103.2 81 60.5
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 1.6e-19 101.3 69 66.7
CSS0031508 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 2.1e-19 100.9 174 39.7
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.1e-18 98.6 61 72.1
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.4e-18 97.4 152 43.4
Cre07.g351400 Chlamydomonas reinhardtii HOM05D006199 ORTHO05D006558 8.4e-16 89.0 283 26.5
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 2.7e-14 84.0 253 29.6
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 1.0e-13 82.0 154 40.3
CDE02G3657 Ceratophyllum demersum HOM05D006199 ORTHO05D006558 1.3e-13 81.6 96 50.0
HanXRQChr15g0479941 Helianthus annuus HOM05D006199 ORTHO05D006558 4.1e-10 70.1 79 45.6
FvH4_4g05800 Fragaria vesca HOM05D006199 ORTHO05D006558 6.9e-10 69.3 54 61.1
Duzib248G0391 Durio zibethinus HOM05D006199 ORTHO05D006558 6.5e-08 62.8 86 43.0


User provided reference genes

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