Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 1.0e-54 216.5 107 100.0
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 1.6e-52 209.1 107 97.2
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.2e-50 203.0 107 93.5
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 1.1e-48 196.4 107 91.6
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 2.8e-36 155.2 108 72.2
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 4.0e-35 151.4 104 71.2
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.2e-34 149.8 109 67.9
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.6e-34 148.7 109 67.9
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 7.6e-34 147.1 115 67.0
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.3e-33 146.4 114 66.7
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.2e-33 145.6 115 67.0
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 2.9e-33 145.2 113 67.3
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.1e-32 143.3 114 64.9
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.1e-32 143.3 114 64.9
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 3.2e-32 141.7 79 87.3
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 7.1e-32 140.6 117 62.4
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 7.1e-32 140.6 107 66.4
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 9.3e-32 140.2 111 64.0
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 9.3e-32 140.2 111 64.0
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 9.3e-32 140.2 108 63.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 9.3e-32 140.2 113 62.8
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 1.2e-31 139.8 114 64.9
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 2.7e-31 138.7 108 64.8
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.5e-31 138.3 109 67.0
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 6.0e-31 137.5 109 66.1
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 7.8e-31 137.1 111 63.1
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 7.8e-31 137.1 109 63.3
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-30 136.3 113 58.4
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.3e-30 136.3 109 64.2
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.3e-30 136.3 109 63.3
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 1.7e-30 136.0 111 64.0
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 2.3e-30 135.6 108 64.8
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 3.0e-30 135.2 106 64.2
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 3.0e-30 135.2 107 64.5
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 5.1e-30 134.4 102 65.7
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 1.1e-29 133.3 109 62.4
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.1e-29 133.3 72 88.9
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 1.1e-29 133.3 107 61.7
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.5e-29 132.9 101 61.4
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.9e-29 132.5 109 61.5
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 2.5e-29 132.1 108 59.3
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 7.3e-29 130.6 108 63.0
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 9.6e-29 130.2 108 60.2
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 9.6e-29 130.2 109 61.5
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.6e-28 129.4 109 60.6
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.8e-28 128.6 110 60.0
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 3.6e-28 128.3 108 63.9
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 6.2e-28 127.5 108 57.4
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 8.1e-28 127.1 109 56.0
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 8.1e-28 127.1 109 59.6
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.4e-27 126.3 109 58.7
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 3.1e-27 125.2 109 57.8
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 4.0e-27 124.8 108 58.3
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 5.3e-27 124.4 109 58.7
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 9.0e-27 123.6 109 56.9
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 1.2e-26 123.2 109 56.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.2e-26 123.2 106 57.5
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-26 123.2 108 58.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.2e-26 123.2 109 55.0
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.5e-26 122.9 109 57.8
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 2.0e-26 122.5 110 57.3
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 2.0e-26 122.5 110 57.3
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 2.0e-26 122.5 113 55.8
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 3.4e-26 121.7 105 59.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 3.4e-26 121.7 115 57.4
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 5.8e-26 120.9 99 64.6
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 9.9e-26 120.2 113 58.4
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 9.9e-26 120.2 108 58.3
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.3e-25 119.8 101 58.4
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.7e-25 119.4 106 58.5
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.2e-25 119.0 109 56.9
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 2.9e-25 118.6 108 58.3
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.8e-25 118.2 105 57.1
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 4.9e-25 117.9 110 54.5
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 6.4e-25 117.5 100 54.0
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 8.4e-25 117.1 101 56.4
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 8.4e-25 117.1 101 56.4
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.1e-24 116.7 101 56.4
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.4e-24 116.3 106 57.5
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 2.4e-24 115.5 101 57.4
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 2.4e-24 115.5 101 57.4
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.4e-24 115.5 101 55.4
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.4e-24 115.5 101 55.4
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 4.2e-24 114.8 106 52.8
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 7.1e-24 114.0 109 50.5
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 7.1e-24 114.0 100 59.0
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 9.3e-24 113.6 108 50.9
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.2e-23 113.2 105 57.1
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 1.2e-23 113.2 102 54.9
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 7.9e-23 110.5 75 69.3
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 5.1e-22 107.8 101 54.5
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 5.1e-22 107.8 99 58.6
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 5.6e-21 104.4 117 48.7
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.3e-20 103.2 65 78.5
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 3.1e-19 98.6 101 50.5
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.1e-19 98.6 103 46.6
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 9.9e-18 93.6 98 45.9
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.3e-17 93.2 103 43.7
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.3e-17 93.2 57 75.4
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.2e-17 92.4 96 56.2
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 8.4e-17 90.5 72 59.7
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.1e-16 90.1 108 45.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.6e-15 86.3 99 46.5
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 1.6e-07 59.7 53 58.5
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 6.0e-07 57.8 36 77.8
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 7.9e-07 57.4 73 38.4


User provided reference genes

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