Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 0.0e+00 1372.5 715 100.0
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 0.0e+00 1230.3 715 90.2
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 0.0e+00 1227.2 715 89.5
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.2e-215 753.8 739 62.0
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 2.5e-213 746.1 738 61.8
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 8.3e-177 624.8 602 62.6
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 4.9e-36 157.1 801 28.5
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 3.3e-32 144.4 762 28.7
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 3.6e-31 141.0 712 27.9
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 4.0e-30 137.5 841 27.1
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 2.1e-26 125.2 346 31.2
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 7.8e-26 123.2 135 51.1
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 5.1e-25 120.6 794 24.9
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.6e-23 115.5 806 26.2
Nitab4.5_0002118g0030 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.1e-22 112.8 130 52.3
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 4.4e-21 107.5 624 27.2
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 4.4e-21 107.5 336 31.2
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 2.9e-20 104.8 151 44.4
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.7e-18 98.2 827 24.8
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 2.7e-18 98.2 475 26.1
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 6.0e-18 97.1 597 25.5
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 6.0e-18 97.1 597 26.6
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.7e-17 95.5 630 25.4
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.3e-17 95.1 172 36.0
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.3e-17 95.1 172 36.0
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 2.3e-17 95.1 796 23.7
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 5.1e-17 94.0 550 25.8
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 5.6e-16 90.5 853 24.2
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 5.6e-16 90.5 329 30.4
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 8.1e-15 86.7 801 24.7
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 4.0e-14 84.3 251 32.7
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.2e-13 82.8 214 29.9
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 2.0e-13 82.0 580 25.3
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 3.4e-13 81.3 480 25.2
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 3.8e-12 77.8 172 34.3
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.4e-11 75.9 327 28.7
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.4e-11 75.9 752 24.1
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 1.9e-11 75.5 513 27.7
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 2.4e-11 75.1 787 23.5
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 7.1e-11 73.6 247 32.4
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.6e-10 72.4 705 23.0
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 2.1e-10 72.0 466 23.2
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 2.1e-10 72.0 783 23.8
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 2.1e-10 72.0 371 26.1
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 6.0e-10 70.5 355 27.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.0e-09 69.7 762 23.5
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.0e-09 69.7 762 23.5
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 6.7e-09 67.0 180 32.2
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.3e-08 64.7 769 22.1
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 9.6e-08 63.2 462 25.3
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.6e-07 62.4 746 23.3
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.4e-06 59.3 85 49.4
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 2.4e-06 58.5 688 23.0


User provided reference genes

Program Settings