Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.3e-82 309.7 153 100.0
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.1e-69 265.8 189 76.2
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 1.8e-68 262.7 196 73.5
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 5.1e-68 261.2 193 74.1
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 5.2e-52 208.0 194 60.8
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.2e-47 192.6 193 58.0
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.2e-47 192.6 192 57.8
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 2.2e-42 176.0 181 59.1
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 6.2e-29 131.3 153 52.3
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 9.8e-27 124.0 180 44.4
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.7e-26 123.2 189 45.0
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 8.3e-26 120.9 207 40.6
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 1.4e-25 120.2 191 44.5
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.9e-25 119.8 191 44.5
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 4.1e-25 118.6 190 44.2
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 7.0e-25 117.9 188 42.6
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 7.0e-25 117.9 176 46.0
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 6.0e-24 114.8 197 42.1
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.3e-23 113.6 192 41.1
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.3e-23 112.8 197 43.7
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 5.0e-23 111.7 219 37.4
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.5e-22 110.2 190 43.2
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 1.5e-22 110.2 180 42.8
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 1.9e-22 109.8 202 38.6
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 3.3e-22 109.0 194 41.2
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 3.3e-22 109.0 201 40.8
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.3e-22 109.0 203 37.4
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 4.3e-22 108.6 215 40.9
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 4.3e-22 108.6 174 44.3
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 9.5e-22 107.5 201 39.3
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.6e-21 106.7 199 39.2
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 2.1e-21 106.3 199 39.2
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 2.1e-21 106.3 187 40.1
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 3.6e-21 105.5 192 43.2
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 3.6e-21 105.5 192 43.2
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 4.7e-21 105.1 192 43.2
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.4e-20 103.6 206 39.3
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 2.3e-20 102.8 195 37.9
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 4.0e-20 102.1 188 43.1
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 5.2e-20 101.7 178 40.4
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 8.9e-20 100.9 177 39.0
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.5e-19 100.1 182 40.7
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 2.0e-19 99.8 175 41.1
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 2.0e-19 99.8 171 42.1
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 2.6e-19 99.4 174 40.8
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 2.6e-19 99.4 179 40.8
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 7.5e-19 97.8 205 39.0
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 7.5e-19 97.8 181 39.2
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 2.2e-18 96.3 205 37.6
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.4e-17 93.6 173 38.7
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 2.4e-17 92.8 175 41.1
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 7.1e-17 91.3 172 38.4
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 1.6e-16 90.1 168 39.3
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 2.1e-16 89.7 227 34.8
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 6.0e-16 88.2 186 41.4
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 1.0e-15 87.4 231 32.9
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 1.0e-15 87.4 233 33.0
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 1.3e-15 87.0 232 32.8
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 1.7e-15 86.7 176 35.8
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 2.3e-15 86.3 233 33.0
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 2.3e-15 86.3 171 36.8
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 2.3e-15 86.3 186 38.7
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 3.0e-15 85.9 154 40.3
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 6.6e-15 84.7 235 33.6
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 6.6e-15 84.7 237 32.1
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 1.9e-14 83.2 237 32.5
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.9e-14 83.2 224 33.5
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 2.5e-14 82.8 236 32.6
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 3.3e-14 82.4 237 32.9
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 3.3e-14 82.4 228 32.5
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 4.3e-14 82.0 154 38.3
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 4.3e-14 82.0 229 31.9
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 4.3e-14 82.0 160 41.2
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 9.5e-14 80.9 209 34.0
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 9.5e-14 80.9 209 34.0
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.2e-13 80.5 243 32.9
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.6e-13 80.1 161 41.0
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 2.1e-13 79.7 176 36.4
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 2.8e-13 79.3 198 33.8
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 8.1e-13 77.8 174 32.2
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.8e-12 76.6 201 34.3
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 5.2e-12 75.1 168 36.9
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 8.9e-12 74.3 157 37.6
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 2.6e-11 72.8 165 34.5
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 5.8e-11 71.6 155 38.7
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 9.9e-11 70.9 228 30.7
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 6.4e-10 68.2 180 30.6
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 8.4e-10 67.8 199 34.7
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 1.1e-09 67.4 229 31.9
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 3.2e-09 65.9 72 54.2
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 5.4e-09 65.1 199 32.7
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.7e-07 60.1 224 30.8
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 2.3e-07 59.7 141 34.8
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 3.0e-07 59.3 205 31.7
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 1.5e-06 57.0 205 31.2
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 3.3e-06 55.8 52 61.5
Zm00001eb063960 Zea mays HOM05D067007 ORTHO05D049648 7.3e-06 54.7 88 39.8


User provided reference genes

Program Settings