Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 3.1e-201 704.9 355 100.0
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 2.1e-189 665.6 355 95.5
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 1.1e-185 653.3 358 93.6
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.2e-152 543.5 334 81.7
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.0e-151 540.4 324 84.0
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 8.1e-141 504.2 316 80.7
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 2.0e-139 499.6 355 75.5
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 2.2e-130 469.5 291 79.7
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.4e-129 466.8 358 70.7
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 5.4e-129 464.9 389 66.8
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 3.5e-128 462.2 366 69.7
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 3.9e-127 458.8 366 67.2
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.6e-125 453.4 365 66.8
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 2.8e-125 452.6 364 67.3
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 8.1e-125 451.1 321 71.3
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 8.1e-125 451.1 358 67.3
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 5.3e-124 448.4 356 68.8
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 2.0e-123 446.4 281 77.6
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.6e-123 446.0 356 66.0
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 4.5e-123 445.3 359 64.1
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 4.5e-123 445.3 356 65.4
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 7.6e-123 444.5 344 66.0
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 3.8e-122 442.2 365 65.2
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.1e-121 440.7 359 64.9
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 1.4e-121 440.3 359 64.9
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.9e-121 439.9 359 64.6
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 2.5e-121 439.5 366 65.3
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 3.2e-121 439.1 362 65.2
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.2e-121 439.1 353 65.2
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 5.5e-121 438.3 296 73.6
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 1.2e-120 437.2 347 67.1
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 1.2e-120 437.2 359 64.9
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.2e-120 437.2 358 66.5
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 1.2e-120 437.2 280 75.0
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 1.6e-120 436.8 347 68.3
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.6e-120 436.8 353 65.2
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 3.5e-120 435.6 282 74.8
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 3.5e-120 435.6 285 75.4
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 1.3e-119 433.7 355 64.8
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 1.5e-118 430.3 338 66.6
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 3.3e-118 429.1 363 64.2
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 5.6e-118 428.3 355 63.9
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 9.6e-118 427.6 334 66.2
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 2.8e-117 426.0 293 71.3
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 8.2e-117 424.5 355 62.5
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 8.2e-117 424.5 306 69.6
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 1.1e-116 424.1 357 63.3
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 1.4e-116 423.7 355 63.4
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 2.4e-116 422.9 315 68.3
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 2.4e-116 422.9 306 69.3
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 2.4e-116 422.9 354 63.0
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 4.0e-116 422.2 263 78.7
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 6.9e-116 421.4 357 62.2
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 1.5e-115 420.2 353 63.2
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.6e-115 419.5 313 67.1
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.6e-115 419.5 363 60.3
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 5.8e-115 418.3 313 66.8
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 1.3e-114 417.2 327 64.5
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.7e-114 416.8 318 66.4
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.9e-114 416.0 318 66.0
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 2.9e-114 416.0 281 71.2
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 6.5e-114 414.8 347 62.2
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.4e-113 413.7 364 60.7
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 2.5e-113 412.9 347 61.7
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.2e-113 412.5 355 62.3
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 4.2e-113 412.1 347 62.8
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 1.2e-112 410.6 352 61.1
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 1.2e-112 410.6 352 61.1
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 1.2e-112 410.6 352 61.1
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 3.5e-112 409.1 307 65.5
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.5e-110 403.7 329 61.7
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 4.3e-110 402.1 321 62.6
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 6.3e-109 398.3 350 63.4
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 5.3e-108 395.2 334 62.3
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 2.1e-104 383.3 333 59.8
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 6.1e-104 381.7 281 68.3
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 1.1e-100 370.9 362 57.5
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.8e-100 370.2 260 68.5
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 3.1e-100 369.4 306 62.1
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 1.2e-99 367.5 351 56.1
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 5.9e-99 365.2 263 67.7
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 1.3e-98 364.0 254 66.1
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.2e-98 363.2 247 72.5
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 6.5e-98 361.7 261 69.7
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 1.1e-97 360.9 353 59.8
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 5.5e-97 358.6 248 71.0
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 6.1e-96 355.1 346 55.2
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 7.9e-96 354.8 249 71.5
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 7.9e-96 354.8 264 65.9
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.3e-94 349.4 254 65.4
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 4.4e-94 349.0 333 55.9
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 9.7e-94 347.8 241 68.0
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 1.3e-93 347.4 245 70.2
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 5.9e-91 338.6 270 60.0
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 6.5e-90 335.1 257 63.0
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.5e-89 334.0 267 60.3
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.5e-89 334.0 262 63.0
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 1.6e-88 330.5 279 60.2
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 4.7e-88 328.9 257 61.5
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 6.1e-88 328.6 256 70.7
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 5.2e-87 325.5 261 58.6
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 5.2e-87 325.5 261 58.6
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 2.2e-85 320.1 255 58.4
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 6.3e-85 318.5 255 58.0
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.4e-84 317.4 255 57.3
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.4e-84 317.4 263 58.2
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.6e-83 313.9 268 56.3
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 1.6e-83 313.9 255 57.6
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 4.5e-83 312.4 271 54.2
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 4.5e-83 312.4 268 54.9
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 1.0e-82 311.2 268 54.5
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 1.0e-82 311.2 265 54.3
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 2.9e-82 309.7 268 54.5
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 3.8e-82 309.3 261 56.3
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.8e-82 309.3 261 56.3
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 3.2e-81 306.2 268 54.1
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 9.4e-81 304.7 255 56.1
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 2.1e-80 303.5 260 56.9
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 8.0e-80 301.6 257 55.6
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 8.0e-80 301.6 257 55.6
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 2.3e-79 300.1 229 63.3
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 3.7e-77 292.7 255 56.1
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 3.5e-75 286.2 231 57.1
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 3.2e-73 279.6 251 55.4
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.2e-73 279.6 230 57.0
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.5e-73 278.9 255 54.1
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 1.6e-72 277.3 264 55.3
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 1.8e-71 273.9 273 52.4
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 6.8e-71 271.9 197 66.5
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 2.2e-69 266.9 179 72.1
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 2.7e-67 260.0 257 52.1
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.5e-67 259.6 257 52.1
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.9e-66 256.5 256 51.6
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.2e-64 251.1 249 51.0
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.6e-64 250.8 229 54.1
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 3.0e-63 246.5 194 62.4
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 4.4e-62 242.7 193 64.2
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.6e-59 234.2 345 43.2
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 1.7e-58 230.7 244 50.4
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 2.3e-58 230.3 404 37.6
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.8e-55 220.7 179 57.5
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 2.9e-53 213.4 252 45.2
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 3.5e-51 206.5 135 71.9
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 8.6e-50 201.8 161 57.8
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 4.7e-48 196.1 134 74.6
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.3e-47 193.7 166 54.2
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.2e-46 191.4 139 66.2
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.5e-46 191.0 160 56.9
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 1.7e-42 177.6 244 43.4
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.7e-37 161.0 200 47.5
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 1.7e-34 151.0 237 37.1
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 2.0e-30 137.5 183 42.6
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 1.3e-29 134.8 243 35.0
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 2.3e-26 124.0 215 39.1
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 8.7e-26 122.1 93 62.4
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 6.2e-24 115.9 122 50.8
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.1e-23 115.2 110 49.1
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.0e-22 110.9 146 50.0
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 2.9e-21 107.1 65 80.0
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 1.2e-19 101.7 91 59.3
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 1.0e-18 98.6 181 34.3
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 3.9e-18 96.7 68 72.1
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.9e-17 94.4 216 30.6
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 3.3e-17 93.6 69 72.5
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 4.3e-17 93.2 125 51.2
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 1.4e-15 88.2 66 60.6
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.7e-13 81.3 50 72.0
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 8.4e-13 79.0 58 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 4.2e-12 76.6 285 28.1
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.3e-10 71.6 63 52.4
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 7.4e-09 65.9 64 51.6
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 3.1e-07 60.5 69 47.8


User provided reference genes

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