Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005809 Solanum tuberosum HOM05D000017 ORTHO05D013101 5.8e-50 200.7 108 100.0
Solyc04g049893.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 1.3e-20 103.2 82 74.4
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.7e-20 102.8 59 88.1
PGSC0003DMG400039650 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.2e-20 102.4 59 86.4
PGSC0003DMG400023085 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.8e-19 99.4 59 84.7
Nitab4.5_0010257g0010 Nicotiana tabacum HOM05D000017 ORTHO05D015725 5.0e-17 91.3 93 62.4
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.4e-16 89.7 49 87.8
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.6e-15 86.3 49 85.7
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-15 86.3 49 85.7
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 1.6e-15 86.3 49 85.7
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 1.6e-15 86.3 49 85.7
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 1.6e-15 86.3 49 85.7
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.0e-14 83.6 49 83.7
Sopen06g014720 Solanum pennellii HOM05D000017 ORTHO05D013101 1.8e-14 82.8 49 83.7
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 2.3e-14 82.4 49 83.7
Solyc03g096305.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 3.0e-14 82.0 47 85.1
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 3.0e-14 82.0 51 80.4
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 3.9e-14 81.6 52 76.9
Solyc10g018207.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.5e-13 79.7 49 79.6
Sopen01g006290 Solanum pennellii HOM05D000017 ORTHO05D013101 2.2e-12 75.9 51 76.5
CAN.G921.8 Capsicum annuum HOM05D001891 ORTHO05D005832 2.4e-11 72.4 51 64.7
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 4.5e-10 68.2 50 64.0
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 2.2e-09 65.9 50 62.0
Nitab4.5_0003167g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.8e-09 65.1 45 68.9
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 8.5e-09 63.9 34 88.2
Nitab4.5_0003938g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 1.5e-08 63.2 50 64.0
Nitab4.5_0006039g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.5e-08 62.4 50 56.0
Nitab4.5_0012220g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-08 62.4 50 56.0
Nitab4.5_0000768g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.2e-08 62.0 50 56.0
Nitab4.5_0003883g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.2e-08 62.0 73 46.6
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.2e-08 62.0 50 56.0
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.5e-08 61.2 50 54.0
Nitab4.5_0005049g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.2e-08 60.8 46 56.5
Nitab4.5_0027825g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.2e-08 60.8 50 54.0
Nitab4.5_0000173g0280 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.4e-08 60.5 48 58.3
Nitab4.5_0001610g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.4e-08 60.5 77 46.8
Nitab4.5_0001784g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.4e-08 60.5 50 54.0
Nitab4.5_0022073g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.4e-08 60.5 50 54.0
Nitab4.5_0002469g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-07 60.1 53 54.7
Nitab4.5_0006080g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-07 60.1 50 52.0
Nitab4.5_0001357g0210 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-07 59.7 50 54.0
Sopen01g025160 Solanum pennellii HOM05D000017 ORTHO05D001349 1.6e-07 59.7 32 87.5
Nitab4.5_0002006g0120 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.1e-07 59.3 50 52.0
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.7e-07 58.9 50 52.0
Nitab4.5_0000437g0220 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.7e-07 58.9 50 52.0
Nitab4.5_0000202g0420 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.8e-06 56.2 52 51.9
Nitab4.5_0000685g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.8e-06 56.2 52 53.8
Peaxi162Scf00375g00621 Petunia axillaris HOM05D000017 ORTHO05D001349 1.8e-06 56.2 48 52.1
Nitab4.5_0002172g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-06 55.8 54 53.7
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-06 55.8 42 66.7
Peaxi162Scf00102g01064 Petunia axillaris HOM05D000017 ORTHO05D001349 2.3e-06 55.8 58 48.3
Peaxi162Scf00133g00123 Petunia axillaris HOM05D000017 ORTHO05D009364 2.3e-06 55.8 58 48.3
Peaxi162Scf00304g00048 Petunia axillaris HOM05D000017 ORTHO05D001349 2.3e-06 55.8 58 48.3
Peaxi162Scf01492g00009 Petunia axillaris HOM05D000017 ORTHO05D001349 2.3e-06 55.8 58 48.3
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 2.3e-06 55.8 58 50.0
Nitab4.5_0004706g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.0e-06 55.5 44 52.3
Nitab4.5_0008808g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.0e-06 55.5 42 66.7
Peaxi162Scf00066g01917 Petunia axillaris HOM05D000017 ORTHO05D015725 3.0e-06 55.5 50 50.0
Peaxi162Scf00840g00013 Petunia axillaris HOM05D000017 ORTHO05D001349 3.0e-06 55.5 58 48.3
Solyc02g031730.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 3.0e-06 55.5 58 48.3
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 3.0e-06 55.5 33 75.8
PGSC0003DMG400023914 Solanum tuberosum HOM05D000017 ORTHO05D009364 3.0e-06 55.5 49 61.2
Nitab4.5_0000615g0130 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.0e-06 55.1 50 50.0
Peaxi162Scf00081g00111 Petunia axillaris HOM05D000017 ORTHO05D009364 4.0e-06 55.1 46 52.2
Peaxi162Scf00363g00519 Petunia axillaris HOM05D000017 ORTHO05D009364 4.0e-06 55.1 56 44.6
Nitab4.5_0003187g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.2e-06 54.7 42 61.9
Nitab4.5_0003360g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.2e-06 54.7 43 60.5
Nitab4.5_0004921g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.2e-06 54.7 50 50.0
Nitab4.5_0006785g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.2e-06 54.7 80 43.8
Peaxi162Scf00130g00316 Petunia axillaris HOM05D003329 ORTHO05D006664 5.2e-06 54.7 55 49.1
Peaxi162Scf00234g00032 Petunia axillaris HOM05D000017 ORTHO05D001349 5.2e-06 54.7 58 48.3
Peaxi162Scf01266g00038 Petunia axillaris HOM05D000017 ORTHO05D001349 5.2e-06 54.7 49 51.0
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 5.2e-06 54.7 58 48.3
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 5.2e-06 54.7 58 48.3
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 5.2e-06 54.7 58 48.3
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 54.7 58 48.3
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.7e-06 54.3 56 51.8
Nitab4.5_0008946g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.7e-06 54.3 45 55.6
Nitab4.5_0009005g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.7e-06 54.3 47 57.4
Peaxi162Scf00147g00092 Petunia axillaris HOM05D000017 ORTHO05D001349 6.7e-06 54.3 47 53.2
Nitab4.5_0005340g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.8e-06 53.9 50 50.0
Nitab4.5_0005529g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.8e-06 53.9 42 61.9
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf00073g00225 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf00105g00025 Petunia axillaris HOM05D000017 ORTHO05D012383 8.8e-06 53.9 46 50.0
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf00385g00063 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf00802g00124 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf00802g00125 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Peaxi162Scf04852g00001 Petunia axillaris HOM05D003329 ORTHO05D006664 8.8e-06 53.9 57 47.4
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 8.8e-06 53.9 58 48.3
PGSC0003DMG400002554 Solanum tuberosum HOM05D000017 ORTHO05D009364 8.8e-06 53.9 40 62.5


User provided reference genes

Program Settings