Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005616 Solanum tuberosum HOM05D009966 ORTHO05D012083 3.0e-262 907.9 444 100.0
Nitab4.5_0003716g0030 Nicotiana tabacum HOM05D009966 ORTHO05D012083 1.9e-54 217.6 255 49.8
PGSC0003DMG400005634 Solanum tuberosum HOM05D009966 ORTHO05D012083 2.3e-52 210.7 271 49.8
PGSC0003DMG401005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 5.7e-51 206.1 271 46.9
Solyc03g119890.4 Solanum lycopersicum HOM05D009966 ORTHO05D012083 9.7e-51 205.3 268 46.6
CAN.G438.101 Capsicum annuum HOM05D009966 ORTHO05D012083 1.3e-50 204.9 270 45.6
CAN.G438.102 Capsicum annuum HOM05D009966 ORTHO05D012083 2.2e-50 204.1 272 45.6
Sopen03g038770 Solanum pennellii HOM05D009966 ORTHO05D012083 2.2e-50 204.1 268 46.6
PGSC0003DMG402005699 Solanum tuberosum HOM05D009966 ORTHO05D012083 7.0e-49 199.1 268 45.1
Nitab4.5_0000410g0280 Nicotiana tabacum HOM05D009966 ORTHO05D012083 3.0e-36 157.1 239 45.2
Nitab4.5_0000410g0220 Nicotiana tabacum HOM05D009966 ORTHO05D012083 2.6e-35 154.1 144 59.7
Solyc03g119500.1 Solanum lycopersicum HOM05D009966 ORTHO05D012083 7.5e-35 152.5 313 38.0
PGSC0003DMG400044006 Solanum tuberosum HOM05D009966 ORTHO05D012083 1.0e-31 142.1 189 50.8
Peaxi162Scf00488g00110 Petunia axillaris HOM05D009966 ORTHO05D012083 1.1e-30 138.7 237 40.9
Nitab4.5_0011258g0020 Nicotiana tabacum HOM05D009966 ORTHO05D012083 1.5e-27 128.3 125 56.0
Nitab4.5_0000410g0210 Nicotiana tabacum HOM05D009966 ORTHO05D012083 3.7e-26 123.6 90 66.7
Peaxi162Scf00015g00536 Petunia axillaris HOM05D009966 ORTHO05D012083 1.0e-23 115.5 110 52.7
Nitab4.5_0000257g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 8.0e-21 105.9 272 30.9
Nitab4.5_0003716g0050 Nicotiana tabacum HOM05D009966 ORTHO05D012083 6.8e-20 102.8 135 43.0
PGSC0003DMG400044936 Solanum tuberosum HOM05D008903 ORTHO05D019318 8.9e-20 102.4 240 30.8
Nitab4.5_0000257g0010 Nicotiana tabacum HOM05D008903 ORTHO05D011660 2.4e-17 94.4 255 32.5
Peaxi162Scf01141g00031 Petunia axillaris HOM05D008903 ORTHO05D011660 2.0e-16 91.3 182 32.4
Nitab4.5_0002059g0060 Nicotiana tabacum HOM05D008903 ORTHO05D011660 3.5e-16 90.5 271 30.6
Peaxi162Scf01141g00035 Petunia axillaris HOM05D008903 ORTHO05D011660 8.6e-15 85.9 261 29.9
Nitab4.5_0002059g0040 Nicotiana tabacum HOM05D008903 ORTHO05D011660 8.1e-13 79.3 200 32.5
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 1.4e-12 78.6 240 28.3
QL05p032382 Quercus lobata HOM05D001477 ORTHO05D001182 1.4e-12 78.6 267 31.1
QL05p033764 Quercus lobata HOM05D001477 ORTHO05D001182 1.4e-12 78.6 267 31.1
Sopen01g040600 Solanum pennellii HOM05D007286 ORTHO05D008955 1.5e-11 75.1 39 94.9
PGSC0003DMG401027501 Solanum tuberosum HOM05D007286 ORTHO05D008955 1.5e-11 75.1 39 94.9
Nitab4.5_0001577g0020 Nicotiana tabacum HOM05D008903 ORTHO05D011660 2.0e-11 74.7 199 31.2
Peaxi162Scf01141g00032 Petunia axillaris HOM05D008903 ORTHO05D011660 2.0e-11 74.7 210 29.5
Solyc01g096890.4 Solanum lycopersicum HOM05D007286 ORTHO05D008955 5.8e-11 73.2 39 92.3
Nitab4.5_0003716g0060 Nicotiana tabacum HOM05D009966 ORTHO05D012083 9.8e-11 72.4 56 66.1
Nitab4.5_0001611g0060 Nicotiana tabacum HOM05D007286 ORTHO05D008955 2.2e-10 71.2 39 89.7
Nitab4.5_0005056g0090 Nicotiana tabacum HOM05D007286 ORTHO05D008955 2.2e-10 71.2 39 89.7
Peaxi162Scf00647g00320 Petunia axillaris HOM05D007286 ORTHO05D008955 1.4e-09 68.6 39 84.6
QL11p055690 Quercus lobata HOM05D001477 ORTHO05D001182 1.9e-09 68.2 262 27.5
Peaxi162Scf00408g00319 Petunia axillaris HOM05D008903 ORTHO05D011660 2.4e-09 67.8 286 28.0
CAN.G134.51 Capsicum annuum HOM05D007286 ORTHO05D008955 3.2e-09 67.4 39 84.6
PGSC0003DMG400041430 Solanum tuberosum HOM05D008903 ORTHO05D019318 3.2e-09 67.4 177 32.8
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 1.2e-08 65.5 272 27.2
MD17G1178500 Malus domestica HOM05D001477 ORTHO05D001182 2.7e-08 64.3 185 30.8
Cfa003613 Carpinus fangiana HOM05D001477 ORTHO05D001182 1.3e-07 62.0 270 27.0
QL05p018061 Quercus lobata HOM05D001477 ORTHO05D001182 1.3e-07 62.0 257 29.2
Peaxi162Scf00828g00023 Petunia axillaris HOM05D008903 ORTHO05D011660 2.3e-07 61.2 128 35.9
Peaxi162Scf01141g00030 Petunia axillaris HOM05D008903 ORTHO05D019318 2.3e-07 61.2 131 32.8
QL03p072973 Quercus lobata HOM05D001477 ORTHO05D001182 3.0e-07 60.8 255 27.5
Nitab4.5_0000257g0070 Nicotiana tabacum HOM05D008903 ORTHO05D019318 3.9e-07 60.5 141 29.8
Prupe.3G054600 Prunus persica HOM05D021217 ORTHO05D022662 6.6e-07 59.7 262 27.1
Potri.001G395000 Populus trichocarpa HOM05D001477 ORTHO05D001182 8.6e-07 59.3 183 31.1
arahy.Tifrunner.gnm1.ann1.6K70C8 Arachis hypogaea HOM05D001477 ORTHO05D001182 4.3e-06 57.0 227 29.5
Dinv20486 Davidia involucrata HOM05D007286 ORTHO05D008955 4.3e-06 57.0 39 71.8
Dinv30991 Davidia involucrata HOM05D007286 ORTHO05D008955 4.3e-06 57.0 38 73.7
Dinv31112 Davidia involucrata HOM05D007286 ORTHO05D008955 4.3e-06 57.0 38 73.7
arahy.Tifrunner.gnm1.ann1.7B0ACA Arachis hypogaea HOM05D001477 ORTHO05D001182 5.6e-06 56.6 251 29.5
QL04p050581 Quercus lobata HOM05D007286 ORTHO05D008955 7.3e-06 56.2 37 78.4


User provided reference genes

Program Settings