Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005591 Solanum tuberosum HOM05D000311 ORTHO05D000183 8.1e-24 114.0 122 100.0
PGSC0003DMG400030150 Solanum tuberosum HOM05D000311 ORTHO05D000183 1.3e-18 96.7 121 95.9
PGSC0003DMG400032785 Solanum tuberosum HOM05D000311 ORTHO05D000183 3.9e-18 95.1 121 94.2
Solyc08g016310.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 1.1e-17 93.6 121 93.4
PGSC0003DMG400005590 Solanum tuberosum HOM05D000311 ORTHO05D000183 5.6e-17 91.3 119 94.1
Solyc08g016210.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 8.1e-16 87.4 119 93.3
Nitab4.5_0010327g0010 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.9e-13 79.0 117 90.6
Nitab4.5_0000348g0230 Nicotiana tabacum HOM05D000311 ORTHO05D000183 8.4e-13 77.4 117 89.7
Peaxi162Scf01205g00183 Petunia axillaris HOM05D000311 ORTHO05D000183 1.2e-11 73.6 117 89.7
PGSC0003DMG400043045 Solanum tuberosum HOM05D000311 ORTHO05D000183 2.1e-11 72.8 33 93.9
Sopen04g006530 Solanum pennellii HOM05D000311 ORTHO05D000183 3.5e-11 72.0 117 88.0
Nitab4.5_0001621g0050 Nicotiana tabacum HOM05D000311 ORTHO05D000183 1.0e-10 70.5 117 64.1
CAN.G525.20 Capsicum annuum HOM05D000311 ORTHO05D000183 6.7e-10 67.8 117 87.2
Lsat_1_v5_gn_1_29681 Lactuca sativa HOM05D000311 ORTHO05D000183 1.9e-09 66.2 121 81.8
Duzib212G0289 Durio zibethinus HOM05D000311 ORTHO05D000183 4.3e-09 65.1 117 85.5
Solyc04g014400.4 Solanum lycopersicum HOM05D000311 ORTHO05D000183 5.6e-09 64.7 118 86.4
Duzib212G0286 Durio zibethinus HOM05D000311 ORTHO05D000183 1.3e-08 63.5 117 83.8
QL04p004476 Quercus lobata HOM05D000311 ORTHO05D000183 1.3e-08 63.5 117 84.6
CiPaw.01G052500 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.6e-08 63.2 117 85.5
Haze_16592 Corylus avellana HOM05D000311 ORTHO05D000183 2.1e-08 62.8 117 84.6
Oeu010080.1 Olea europaea HOM05D000311 ORTHO05D000183 2.1e-08 62.8 124 79.0
Haze_16587 Corylus avellana HOM05D000311 ORTHO05D000183 2.8e-08 62.4 117 84.6
Oeu046493.1 Olea europaea HOM05D000311 ORTHO05D000183 2.8e-08 62.4 124 78.2
TWI34G1776 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 2.8e-08 62.4 121 81.8
Oeu029035.2 Olea europaea HOM05D000311 ORTHO05D000183 3.7e-08 62.0 117 79.5
Actinidia21924 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.8e-08 61.6 120 80.0
CAN.G855.38 Capsicum annuum HOM05D000311 ORTHO05D000183 4.8e-08 61.6 117 82.9
Duzib212G0424 Durio zibethinus HOM05D000311 ORTHO05D000183 4.8e-08 61.6 117 83.8
CiPaw.01G052700 Carya illinoinensis HOM05D000311 ORTHO05D000183 6.2e-08 61.2 117 84.6
Duzib212G0384 Durio zibethinus HOM05D000311 ORTHO05D000183 6.2e-08 61.2 117 84.6
Duzib212G0987 Durio zibethinus HOM05D000311 ORTHO05D000183 6.2e-08 61.2 117 84.6
QL05p085204 Quercus lobata HOM05D000311 ORTHO05D000183 6.2e-08 61.2 117 82.9
GSVIVG01034276001 Vitis vinifera HOM05D000311 ORTHO05D000183 6.2e-08 61.2 120 82.5
CSS0000641 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 8.1e-08 60.8 117 83.8
CiPaw.01G103000 Carya illinoinensis HOM05D000311 ORTHO05D000183 8.1e-08 60.8 119 81.5
Duzib212G0027 Durio zibethinus HOM05D000311 ORTHO05D000183 8.1e-08 60.8 117 82.9
Duzib212G0223 Durio zibethinus HOM05D000311 ORTHO05D000183 8.1e-08 60.8 117 84.6
Duzib212G0447 Durio zibethinus HOM05D000311 ORTHO05D000183 8.1e-08 60.8 117 82.1
Duzib212G0464 Durio zibethinus HOM05D000311 ORTHO05D000183 8.1e-08 60.8 117 84.6
Duzib212G0734 Durio zibethinus HOM05D000311 ORTHO05D000183 8.1e-08 60.8 120 81.7
Oeu011159.1 Olea europaea HOM05D000311 ORTHO05D000183 8.1e-08 60.8 117 81.2
CAN.G3566.2 Capsicum annuum HOM05D000311 ORTHO05D000183 1.1e-07 60.5 116 85.3
CAN.G525.24 Capsicum annuum HOM05D000311 ORTHO05D000183 1.1e-07 60.5 116 85.3
CAN.G525.26 Capsicum annuum HOM05D000311 ORTHO05D000183 1.1e-07 60.5 116 85.3
Duzib184G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 1.1e-07 60.5 117 84.6
Duzib214G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 1.1e-07 60.5 117 84.6
HanXRQChr04g0097701 Helianthus annuus HOM05D000311 ORTHO05D000183 1.1e-07 60.5 117 81.2
Nn8g40065 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.1e-07 60.5 117 82.9
Oeu010079.1 Olea europaea HOM05D000311 ORTHO05D000183 1.1e-07 60.5 117 81.2
CiPaw.07G044800 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.4e-07 60.1 117 83.8
Duzib212G1037 Durio zibethinus HOM05D000311 ORTHO05D000183 1.4e-07 60.1 117 82.9
Dinv42933 Davidia involucrata HOM05D000311 ORTHO05D000183 1.8e-07 59.7 121 76.9
Dinv43167 Davidia involucrata HOM05D000311 ORTHO05D000183 1.8e-07 59.7 121 76.9
Gohir.A08G044100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.8e-07 59.7 117 83.8
Thecc.10G149900 Theobroma cacao HOM05D000311 ORTHO05D000183 1.8e-07 59.7 117 81.2
Dinv36446 Davidia involucrata HOM05D000311 ORTHO05D000183 2.4e-07 59.3 121 77.7
QL05p085350 Quercus lobata HOM05D000311 ORTHO05D000183 2.4e-07 59.3 117 82.1
CiPaw.01G103300 Carya illinoinensis HOM05D000311 ORTHO05D000183 3.1e-07 58.9 119 81.5
Duzib212G0651 Durio zibethinus HOM05D000311 ORTHO05D000183 3.1e-07 58.9 117 81.2
CSS0044420 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.0e-07 58.5 117 82.9
HanXRQChr04g0096831 Helianthus annuus HOM05D000311 ORTHO05D000183 4.0e-07 58.5 121 79.3
Lsat_1_v5_gn_1_31481 Lactuca sativa HOM05D000311 ORTHO05D000183 4.0e-07 58.5 117 81.2
QL02p090841 Quercus lobata HOM05D000311 ORTHO05D000183 4.0e-07 58.5 117 84.6
Haze_16586 Corylus avellana HOM05D000311 ORTHO05D000183 5.3e-07 58.2 117 80.3
Duzib019G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 5.3e-07 58.2 117 81.2
Duzib184G0004 Durio zibethinus HOM05D000311 ORTHO05D000183 5.3e-07 58.2 117 81.2
Duzib212G0774 Durio zibethinus HOM05D000311 ORTHO05D000183 5.3e-07 58.2 117 82.1
Duzib214G0002 Durio zibethinus HOM05D000311 ORTHO05D000183 5.3e-07 58.2 117 81.2
Glyma.18G195200 Glycine max HOM05D000311 ORTHO05D000183 5.3e-07 58.2 121 76.9
Oeu010082.1 Olea europaea HOM05D000311 ORTHO05D000183 5.3e-07 58.2 116 60.3
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 6.9e-07 57.8 117 76.9
CiPaw.07G049600 Carya illinoinensis HOM05D000311 ORTHO05D000183 6.9e-07 57.8 117 82.9
Duzib212G0107 Durio zibethinus HOM05D000311 ORTHO05D000183 6.9e-07 57.8 117 83.8
Glyma.07G144100 Glycine max HOM05D000311 ORTHO05D000183 6.9e-07 57.8 121 76.9
HanXRQChr04g0098161 Helianthus annuus HOM05D000311 ORTHO05D000183 6.9e-07 57.8 119 82.4
HanXRQChr04g0098171 Helianthus annuus HOM05D000311 ORTHO05D000183 6.9e-07 57.8 119 82.4
Glyma.07G143500 Glycine max HOM05D000311 ORTHO05D000183 9.0e-07 57.4 121 78.5
TWI34G1226 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 9.0e-07 57.4 117 81.2
COL.COLO4_20160 Corchorus olitorius HOM05D000311 ORTHO05D000183 1.2e-06 57.0 121 81.0
Haze_20326 Corylus avellana HOM05D000311 ORTHO05D000183 1.5e-06 56.6 115 83.5
Manes.14G136800 Manihot esculenta HOM05D000311 ORTHO05D000183 1.5e-06 56.6 117 77.8
QL05p085400 Quercus lobata HOM05D000311 ORTHO05D000183 1.5e-06 56.6 117 80.3
TWI34G1669 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.5e-06 56.6 121 78.5
CiPaw.07G045100 Carya illinoinensis HOM05D000311 ORTHO05D000183 2.0e-06 56.2 121 81.0
Dinv18188 Davidia involucrata HOM05D000311 ORTHO05D000183 2.0e-06 56.2 120 79.2
HanXRQChr04g0096841 Helianthus annuus HOM05D000311 ORTHO05D000183 2.0e-06 56.2 117 80.3
MBI18_g41218_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 2.0e-06 56.2 121 79.3
Nn8g39596 Nelumbo nucifera HOM05D000311 ORTHO05D000183 2.0e-06 56.2 117 73.5
QL05p013496 Quercus lobata HOM05D000311 ORTHO05D000183 2.0e-06 56.2 117 82.1
Haze_20328 Corylus avellana HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 82.1
Duzib212G0835 Durio zibethinus HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 82.1
HanXRQChr04g0098091 Helianthus annuus HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 80.3
Nitab4.5_0004349g0020 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 81.2
Potri.018G120700 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 82.9
QL05p013130 Quercus lobata HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 81.2
QL05p013580 Quercus lobata HOM05D000311 ORTHO05D000183 2.6e-06 55.8 117 82.1
CiPaw.12G000700 Carya illinoinensis HOM05D000311 ORTHO05D000183 3.4e-06 55.5 117 81.2
CiPaw.15G114400 Carya illinoinensis HOM05D000311 ORTHO05D000183 4.5e-06 55.1 117 81.2
CiPaw.15G116400 Carya illinoinensis HOM05D000311 ORTHO05D000183 4.5e-06 55.1 117 82.1
Haze_16590 Corylus avellana HOM05D000311 ORTHO05D000183 4.5e-06 55.1 115 83.5
Dinv41536 Davidia involucrata HOM05D000311 ORTHO05D000183 4.5e-06 55.1 118 78.8
Glyma.07G143900 Glycine max HOM05D000311 ORTHO05D000183 4.5e-06 55.1 121 78.5
Gohir.A05G389900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.5e-06 55.1 117 82.1
Gohir.D08G053700 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.5e-06 55.1 117 81.2
MBI18_g17975_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 4.5e-06 55.1 121 76.9
QL05p013238 Quercus lobata HOM05D000311 ORTHO05D000183 4.5e-06 55.1 117 82.1
CiPaw.12G006800 Carya illinoinensis HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 81.2
Gorai.004G053700 Gossypium raimondii HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 81.2
Lsat_1_v5_gn_1_29741 Lactuca sativa HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 80.3
Medtr7g066590 Medicago truncatula HOM05D000311 ORTHO05D000183 5.8e-06 54.7 120 77.5
Nitab4.5_0002569g0050 Nicotiana tabacum HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 80.3
Potri.018G118062 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.8e-06 54.7 114 84.2
QL05p013181 Quercus lobata HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 82.1
TAR128G0001 Trochodendron aralioides HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 82.1
TAR636G1261 Trochodendron aralioides HOM05D000311 ORTHO05D000183 5.8e-06 54.7 117 81.2
Duzib168G2401 Durio zibethinus HOM05D000311 ORTHO05D000183 7.6e-06 54.3 117 82.1
Nitab4.5_0006696g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 7.6e-06 54.3 120 80.0
VMungo1127G2119 Vigna mungo HOM05D000311 ORTHO05D000183 7.6e-06 54.3 121 78.5
GSVIVG01034283001 Vitis vinifera HOM05D000846 ORTHO05D000183 7.6e-06 54.3 120 80.8
CiPaw.15G113300 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 81.2
HanXRQChr04g0097591 Helianthus annuus HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 30.8
Manes.14G119728 Manihot esculenta HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 76.9
Manes.14G120100 Manihot esculenta HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 76.9
Manes.14G120156 Manihot esculenta HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 76.9
Manes.14G120177 Manihot esculenta HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 76.9
Manes.14G120240 Manihot esculenta HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 76.9
QL05p014051 Quercus lobata HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 80.3
Hund09289 Selenicereus undatus HOM05D000311 ORTHO05D000183 1.0e-05 53.9 117 74.4
Sopen08g006730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-05 53.9 33 72.7
TWI34G0890 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.0e-05 53.9 118 80.5


User provided reference genes

Program Settings