Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005561 Solanum tuberosum HOM05D000541 ORTHO05D023154 5.5e-95 350.9 171 100.0
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 9.3e-34 147.5 163 49.7
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 2.1e-33 146.4 163 49.1
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 2.7e-33 146.0 171 48.0
PGSC0003DMG400004494 Solanum tuberosum HOM05D000541 ORTHO05D012255 3.3e-31 139.0 113 56.6
PGSC0003DMG400027246 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.3e-31 139.0 167 45.5
Sopen09g010700 Solanum pennellii HOM05D000541 ORTHO05D000137 7.3e-31 137.9 114 57.9
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-26 124.0 167 40.1
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-26 123.6 167 40.1
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-26 123.6 167 40.1
Sopen01g032160 Solanum pennellii HOM05D000541 ORTHO05D012255 1.9e-26 123.2 127 48.0
Sopen05g009010 Solanum pennellii HOM05D000541 ORTHO05D000137 2.4e-26 122.9 121 52.1
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-26 122.1 167 40.7
PGSC0003DMG400002966 Solanum tuberosum HOM05D000541 ORTHO05D000137 7.1e-26 121.3 114 51.8
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.6e-25 118.6 114 51.8
Sopen03g030640 Solanum pennellii HOM05D005797 ORTHO05D006479 1.3e-24 117.1 167 37.7
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-24 117.1 114 49.1
PGSC0003DMG400037440 Solanum tuberosum HOM05D000541 ORTHO05D000137 6.7e-24 114.8 114 51.8
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.7e-24 114.4 109 52.3
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-23 113.6 114 47.4
Sopen02g010860 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-23 112.1 114 49.1
Sopen08g011320 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-23 112.1 111 52.3
Sopen00g005350 Solanum pennellii HOM05D000541 ORTHO05D000137 1.3e-22 110.5 111 51.4
PGSC0003DMG400030095 Solanum tuberosum HOM05D000541 ORTHO05D012255 2.1e-22 109.8 97 53.6
PGSC0003DMG400007270 Solanum tuberosum HOM05D000679 ORTHO05D000482 3.7e-22 109.0 111 48.6
PGSC0003DMG400047122 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.7e-22 109.0 123 46.3
Sopen02g001060 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-21 107.5 111 49.5
Sopen02g032120 Solanum pennellii HOM05D000541 ORTHO05D000137 1.1e-21 107.5 111 49.5
Sopen03g020010 Solanum pennellii HOM05D000679 ORTHO05D000137 1.8e-21 106.7 114 48.2
Sopen01g027580 Solanum pennellii HOM05D000006 ORTHO05D000001 2.6e-20 102.8 84 56.0
CAN.G158.15 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-19 100.1 143 39.2
Sopen04g010090 Solanum pennellii HOM05D000679 ORTHO05D000137 2.2e-19 99.8 114 46.5
PGSC0003DMG400036560 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.4e-19 97.8 162 37.7
PGSC0003DMG400042469 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.4e-18 97.1 114 46.5
CAN.G546.61 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-16 89.7 126 41.3
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 2.3e-16 89.7 152 37.5
Sopen10g022900 Solanum pennellii HOM05D000011 ORTHO05D000137 1.1e-15 87.4 96 44.8
Sopen09g012330 Solanum pennellii HOM05D000541 ORTHO05D000137 3.3e-15 85.9 94 47.9
CAN.G572.59 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-15 84.7 71 53.5
PGSC0003DMG400035726 Solanum tuberosum HOM05D013601 ORTHO05D023154 7.4e-15 84.7 67 61.2
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.1e-14 83.2 74 56.8
CAN.G64.1 Capsicum annuum HOM05D000005 ORTHO05D000137 1.4e-13 80.5 71 49.3
PGSC0003DMG400016701 Solanum tuberosum HOM05D000541 ORTHO05D012255 1.4e-13 80.5 75 49.3
PGSC0003DMG400034712 Solanum tuberosum HOM05D000679 ORTHO05D014686 1.4e-13 80.5 179 33.5
CAN.G726.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-13 79.7 71 47.9
Sopen04g013050 Solanum pennellii HOM05D000541 ORTHO05D000137 2.4e-13 79.7 235 27.7
Sopen10g022300 Solanum pennellii HOM05D000004 ORTHO05D000137 2.6e-12 76.3 122 38.5
CAN.G1389.27 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-11 74.3 73 43.8
CAN.G982.18 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-11 73.9 126 38.1
Nitab4.5_0008559g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-11 73.9 72 43.1
CAN.G532.22 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-11 73.6 111 37.8
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 1.7e-11 73.6 138 31.2
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 1.7e-11 73.6 124 35.5
CAN.G1245.5 Capsicum annuum HOM05D000679 ORTHO05D000137 2.2e-11 73.2 174 29.3
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 3.8e-11 72.4 124 35.5
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.8e-11 72.4 116 37.1
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 5.0e-11 72.0 53 56.6
Nitab4.5_0002059g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.0e-11 72.0 137 32.8
Sopen01g006060 Solanum pennellii HOM05D003373 ORTHO05D004419 8.4e-11 71.2 91 42.9
CAN.G1392.3 Capsicum annuum HOM05D001503 ORTHO05D003820 1.1e-10 70.9 93 37.6
CAN.G1036.11 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-10 70.5 141 30.5
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-10 70.5 53 50.9
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 1.9e-10 70.1 98 34.7
Nitab4.5_0007686g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.9e-10 70.1 141 32.6
CAN.G362.44 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-10 69.3 120 31.7
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 3.2e-10 69.3 169 27.8
CAN.G702.38 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-10 68.9 57 52.6
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 4.2e-10 68.9 175 28.6
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.5e-10 68.6 76 40.8
Sopen06g015940 Solanum pennellii HOM05D000679 ORTHO05D000482 5.5e-10 68.6 96 39.6
CAN.G1095.25 Capsicum annuum HOM05D000541 ORTHO05D010311 7.1e-10 68.2 53 54.7
CAN.G182.15 Capsicum annuum HOM05D003397 ORTHO05D000137 9.3e-10 67.8 125 36.8
Solyc06g050740.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 9.3e-10 67.8 99 36.4
Sopen00g004430 Solanum pennellii HOM05D000679 ORTHO05D000482 9.3e-10 67.8 136 33.1
CAN.G1659.8 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-09 67.4 128 31.2
Solyc08g014616.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 1.2e-09 67.4 126 34.9
Nitab4.5_0000464g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-09 67.0 76 40.8
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-09 67.0 76 40.8
Nitab4.5_0014452g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-09 67.0 76 39.5
Solyc03g034207.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 1.6e-09 67.0 83 42.2
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.6e-09 67.0 76 42.1
CAN.G20.4 Capsicum annuum HOM05D000541 ORTHO05D000482 2.1e-09 66.6 153 28.1
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 2.1e-09 66.6 120 31.7
Nitab4.5_0003533g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-09 66.6 95 35.8
CAN.G575.73 Capsicum annuum HOM05D000679 ORTHO05D000137 2.7e-09 66.2 98 32.7
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.7e-09 66.2 166 30.7
Sopen07g014970 Solanum pennellii HOM05D000679 ORTHO05D000482 2.7e-09 66.2 124 33.9
Sopen01g022800 Solanum pennellii HOM05D000679 ORTHO05D000482 3.5e-09 65.9 124 33.1
CAN.G226.24 Capsicum annuum HOM05D000679 ORTHO05D000137 4.6e-09 65.5 103 35.9
CAN.G905.30 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-09 65.5 128 33.6
Nitab4.5_0001558g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.6e-09 65.5 96 36.5
Nitab4.5_0002750g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-09 65.5 76 42.1
Nitab4.5_0010113g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-09 65.5 53 49.1
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 6.1e-09 65.1 168 31.0
Nitab4.5_0006644g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.1e-09 65.1 73 41.1
CAN.G745.11 Capsicum annuum HOM05D000541 ORTHO05D000137 7.9e-09 64.7 97 38.1
Nitab4.5_0001115g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.9e-09 64.7 64 43.8
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 7.9e-09 64.7 124 33.1
Sopen03g025990 Solanum pennellii HOM05D000679 ORTHO05D030640 7.9e-09 64.7 129 28.7
Sopen07g022050 Solanum pennellii HOM05D000679 ORTHO05D000482 1.0e-08 64.3 124 32.3
CAN.G1247.1 Capsicum annuum HOM05D000679 ORTHO05D000482 1.3e-08 63.9 103 30.1
Nitab4.5_0000983g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-08 63.9 133 31.6
Nitab4.5_0024925g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.3e-08 63.9 112 35.7
Solyc10g050777.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.3e-08 63.9 75 37.3
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.8e-08 63.5 76 40.8
Nitab4.5_0027154g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-08 63.5 108 36.1
CAN.G476.3 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-08 63.2 73 38.4
Solyc09g150135.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 2.3e-08 63.2 129 31.8
CAN.G449.58 Capsicum annuum HOM05D000679 ORTHO05D000482 3.0e-08 62.8 53 47.2
Nitab4.5_0001267g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-08 62.8 112 34.8
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.0e-08 62.8 93 36.6
Solyc01g150118.1 Solanum lycopersicum HOM05D009268 ORTHO05D000482 3.9e-08 62.4 76 35.5
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 3.9e-08 62.4 72 36.1
Sopen05g009150 Solanum pennellii HOM05D009268 ORTHO05D011733 3.9e-08 62.4 75 36.0
Sopen08g027430 Solanum pennellii HOM05D000679 ORTHO05D030640 5.1e-08 62.0 138 28.3
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.7e-08 61.6 124 31.5
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 6.7e-08 61.6 52 50.0
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-08 61.6 52 50.0
PGSC0003DMG400042934 Solanum tuberosum HOM05D010988 ORTHO05D000034 6.7e-08 61.6 130 32.3
PGSC0003DMG400040968 Solanum tuberosum HOM05D000679 ORTHO05D000482 8.7e-08 61.2 83 33.7
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-07 60.8 114 35.1
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-07 60.8 114 33.3
Sopen01g048340 Solanum pennellii HOM05D000067 ORTHO05D000280 1.1e-07 60.8 88 35.2
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 1.1e-07 60.8 52 48.1
PGSC0003DMG400019312 Solanum tuberosum HOM05D000679 ORTHO05D000482 1.1e-07 60.8 182 28.0
Nitab4.5_0014318g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.5e-07 60.5 126 32.5
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 1.9e-07 60.1 98 28.6
Nitab4.5_0005869g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.9e-07 60.1 128 31.2
CAN.G1458.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-07 59.7 143 28.7
CAN.G151.18 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-07 59.7 83 39.8
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 2.5e-07 59.7 76 30.3
Nitab4.5_0001018g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-07 59.7 108 30.6
Sopen06g005890 Solanum pennellii HOM05D010988 ORTHO05D000137 2.5e-07 59.7 123 30.9
PGSC0003DMG400046174 Solanum tuberosum HOM05D000679 ORTHO05D000482 2.5e-07 59.7 52 50.0
CAN.G70.13 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.3 114 29.8
Nitab4.5_0013794g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.3e-07 59.3 92 33.7
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 3.3e-07 59.3 132 30.3
CAN.G84.22 Capsicum annuum HOM05D000541 ORTHO05D000137 5.7e-07 58.5 124 30.6
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-07 58.5 127 29.9
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.7e-07 58.5 114 34.2
Nitab4.5_0000576g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.4e-07 58.2 114 35.1
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 7.4e-07 58.2 127 30.7
Nitab4.5_0017301g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.4e-07 58.2 139 30.9
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.7e-07 57.8 90 31.1
CAN.G140.53 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-06 57.4 53 41.5
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 57.4 54 46.3
CAN.G874.17 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-06 57.0 59 45.8
Nitab4.5_0001171g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-06 57.0 84 38.1
Nitab4.5_0008487g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-06 57.0 112 32.1
Sopen02g012730 Solanum pennellii HOM05D000541 ORTHO05D012255 1.6e-06 57.0 82 40.2
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.8e-06 56.2 92 35.9
Nitab4.5_0007686g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.8e-06 56.2 62 45.2
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.8e-06 56.2 93 35.5
Nitab4.5_0022521g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.8e-06 56.2 76 34.2
CAN.G708.6 Capsicum annuum HOM05D000886 ORTHO05D000525 3.7e-06 55.8 86 37.2
PGSC0003DMG400006343 Solanum tuberosum HOM05D000679 ORTHO05D000482 3.7e-06 55.8 54 44.4
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 6.3e-06 55.1 41 46.3
CAN.G529.16 Capsicum annuum HOM05D000541 ORTHO05D000137 8.2e-06 54.7 115 30.4
CAN.G644.13 Capsicum annuum HOM05D000022 ORTHO05D000482 8.2e-06 54.7 123 30.9
Nitab4.5_0008941g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.2e-06 54.7 53 43.4


User provided reference genes

Program Settings