Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005533 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.8e-89 332.0 178 100.0
PGSC0003DMG400039981 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.3e-66 255.0 165 83.6
PGSC0003DMG400005534 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.6e-66 253.8 180 78.9
CAN.G843.3 Capsicum annuum HOM05D007832 ORTHO05D009598 1.5e-39 166.8 177 52.0
CAN.G843.1 Capsicum annuum HOM05D007832 ORTHO05D009598 2.6e-39 166.0 173 51.4
CAN.G843.2 Capsicum annuum HOM05D007832 ORTHO05D009598 3.4e-39 165.6 177 52.0
CAN.G1184.14 Capsicum annuum HOM05D007832 ORTHO05D009598 1.7e-38 163.3 160 54.4
CAN.G1392.11 Capsicum annuum HOM05D007832 ORTHO05D009598 1.1e-37 160.6 160 53.8
PGSC0003DMG400035463 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.8e-33 145.2 178 50.6
Nitab4.5_0000234g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 3.2e-29 132.5 161 50.3
Nitab4.5_0007309g0020 Nicotiana tabacum HOM05D007832 ORTHO05D009598 7.2e-29 131.3 166 50.6
Peaxi162Scf00440g00014 Petunia axillaris HOM05D007832 ORTHO05D009598 7.9e-28 127.9 179 46.9
Solyc12g005210.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 1.3e-27 127.1 73 82.2
Sopen12g007920 Solanum pennellii HOM05D007832 ORTHO05D009598 3.9e-27 125.6 158 46.8
Solyc12g016170.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 6.7e-27 124.8 158 44.9
Sopen12g007870 Solanum pennellii HOM05D007832 ORTHO05D009598 6.7e-27 124.8 158 45.6
Sopen12g007960 Solanum pennellii HOM05D007832 ORTHO05D009598 1.1e-26 124.0 158 44.9
Sopen12g007950 Solanum pennellii HOM05D007832 ORTHO05D009598 1.3e-25 120.6 158 45.6
Sopen12g025810 Solanum pennellii HOM05D007832 ORTHO05D009598 1.3e-25 120.6 158 44.9
PGSC0003DMG400034608 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.7e-25 120.2 158 44.9
PGSC0003DMG400035476 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.2e-25 119.8 158 43.7
Peaxi162Scf00006g00057 Petunia axillaris HOM05D007832 ORTHO05D009598 2.8e-25 119.4 181 45.3
Peaxi162Scf00006g00075 Petunia axillaris HOM05D007832 ORTHO05D009598 2.8e-25 119.4 181 45.3
PGSC0003DMG400044231 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.8e-25 119.4 158 44.3
Solyc12g016180.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 4.8e-25 118.6 158 43.7
PGSC0003DMG400045649 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.3e-25 118.2 158 44.3
PGSC0003DMG400005968 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.3e-24 115.2 173 42.8
PGSC0003DMG400044285 Solanum tuberosum HOM05D007832 ORTHO05D009598 7.7e-23 111.3 169 40.8
Nitab4.5_0008777g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.9e-22 109.4 161 42.2
Nitab4.5_0000153g0130 Nicotiana tabacum HOM05D007832 ORTHO05D009598 3.8e-22 109.0 166 42.2
PGSC0003DMG400044576 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.2e-20 104.0 177 38.4
Sopen11g026860 Solanum pennellii HOM05D007832 ORTHO05D009598 5.1e-19 98.6 143 38.5
PGSC0003DMG400046736 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.5e-18 97.1 161 40.4
PGSC0003DMG400037342 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.2e-17 93.2 156 39.1
Peaxi162Scf00617g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 3.1e-16 89.4 148 37.8
Peaxi162Scf00611g00515 Petunia axillaris HOM05D007832 ORTHO05D009598 4.1e-16 89.0 140 40.0
PGSC0003DMG400047062 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.3e-16 88.6 179 36.3
Sopen12g025820 Solanum pennellii HOM05D000004 ORTHO05D009598 2.6e-15 86.3 154 39.6
CAN.G782.17 Capsicum annuum HOM05D007832 ORTHO05D009598 4.5e-15 85.5 182 36.3
Solyc12g016150.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 5.9e-15 85.1 119 40.3
Peaxi162Scf00307g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 7.7e-15 84.7 140 36.4
Peaxi162Scf00894g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 7.7e-15 84.7 140 36.4
Peaxi162Scf03110g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 7.7e-15 84.7 140 36.4
Solyc12g017300.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 1.7e-14 83.6 119 38.7
CAN.G843.4 Capsicum annuum HOM05D007832 ORTHO05D009598 5.5e-13 78.6 92 50.0
Nitab4.5_0000163g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 7.2e-13 78.2 158 34.8
Peaxi162Scf00617g00012 Petunia axillaris HOM05D007832 ORTHO05D009598 9.4e-13 77.8 135 34.8
CAN.G26643.1 Capsicum annuum HOM05D007832 ORTHO05D009598 1.2e-12 77.4 90 50.0
Peaxi162Scf00061g00181 Petunia axillaris HOM05D000307 ORTHO05D009598 1.2e-12 77.4 164 35.4
Peaxi162Scf00617g00003 Petunia axillaris HOM05D007832 ORTHO05D009598 1.2e-12 77.4 143 34.3
Nitab4.5_0000738g0160 Nicotiana tabacum HOM05D000307 ORTHO05D009598 1.6e-12 77.0 170 35.3
Peaxi162Scf00593g00002 Petunia axillaris HOM05D014229 ORTHO05D009598 2.1e-12 76.6 152 31.6
Nitab4.5_0003358g0030 Nicotiana tabacum HOM05D007832 ORTHO05D009598 4.7e-12 75.5 145 36.6
Nitab4.5_0002260g0260 Nicotiana tabacum HOM05D007832 ORTHO05D009598 6.1e-12 75.1 159 35.8
Nitab4.5_0004114g0070 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.8e-11 73.6 118 34.7
Nitab4.5_0007309g0050 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.3e-11 73.2 133 41.4
Peaxi162Scf00617g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 3.9e-11 72.4 141 33.3
Peaxi162Scf01193g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 1.1e-10 70.9 134 33.6
CAN.G1392.12 Capsicum annuum HOM05D007832 ORTHO05D009598 1.5e-10 70.5 75 50.7
Peaxi162Scf00538g00047 Petunia axillaris HOM05D007832 ORTHO05D009598 9.7e-10 67.8 134 32.1
CAN.G201.31 Capsicum annuum HOM05D007832 ORTHO05D009598 1.3e-09 67.4 121 37.2
SGA_v2.0_scaffold41G15855 Striga asiatica HOM05D000307 ORTHO05D000166 2.2e-09 66.6 156 23.7
Peaxi162Scf00593g00034 Petunia axillaris HOM05D007832 ORTHO05D009598 2.8e-09 66.2 121 33.1
PGSC0003DMG400041411 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.7e-09 65.9 160 33.8
Peaxi162Scf29147g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 4.8e-09 65.5 105 36.2
Oeu028858.1 Olea europaea HOM05D000307 ORTHO05D009598 1.1e-08 64.3 154 26.6
Sopen12g025800 Solanum pennellii HOM05D007832 ORTHO05D009598 5.3e-08 62.0 74 51.4
Migut.B01615 Erythranthe guttata HOM05D000307 ORTHO05D009598 2.6e-07 59.7 141 31.2
Glyma.08G034100 Glycine max HOM05D000203 ORTHO05D000135 3.5e-07 59.3 126 28.6
Peaxi162Scf00006g00718 Petunia axillaris HOM05D007832 ORTHO05D009598 4.5e-07 58.9 98 32.7
SalBow6G3728 Salvia bowleyana HOM05D000307 ORTHO05D000166 1.3e-06 57.4 123 23.6
SalBow6G5131 Salvia bowleyana HOM05D000307 ORTHO05D000166 1.3e-06 57.4 123 23.6
Solyc12g016147.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 2.2e-06 56.6 58 41.4
SalBow6G0803 Salvia bowleyana HOM05D000307 ORTHO05D000166 3.8e-06 55.8 165 23.6
Dinv12353 Davidia involucrata HOM05D000307 ORTHO05D009598 5.0e-06 55.5 121 30.6
Lj1C376T9 Lonicera japonica HOM05D000307 ORTHO05D000166 5.0e-06 55.5 161 28.0
Peaxi162Scf00593g00315 Petunia axillaris HOM05D007832 ORTHO05D009598 5.0e-06 55.5 56 41.1
Ca_22979_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 6.5e-06 55.1 161 28.0
Migut.B01089 Erythranthe guttata HOM05D000307 ORTHO05D000166 8.5e-06 54.7 153 26.1
Gohir.D11G332700 Gossypium hirsutum HOM05D000307 ORTHO05D000166 8.5e-06 54.7 152 25.7


User provided reference genes

Program Settings