Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005514 Solanum tuberosum HOM05D004353 ORTHO05D004989 4.8e-69 264.6 158 100.0
Solyc04g054460.3 Solanum lycopersicum HOM05D004353 ORTHO05D004989 4.4e-62 241.5 158 94.3
Sopen04g024280 Solanum pennellii HOM05D004353 ORTHO05D004989 4.4e-62 241.5 158 94.3
CAN.G162.60 Capsicum annuum HOM05D004353 ORTHO05D004989 5.5e-57 224.6 158 84.2
Peaxi162Scf00008g03715 Petunia axillaris HOM05D004353 ORTHO05D004989 1.4e-55 219.9 159 81.1
Nitab4.5_0000214g0170 Nicotiana tabacum HOM05D004353 ORTHO05D004989 2.4e-52 209.1 158 81.6
Nitab4.5_0000518g0010 Nicotiana tabacum HOM05D004353 ORTHO05D004989 5.5e-49 198.0 158 79.1
Nitab4.5_0001095g0110 Nicotiana tabacum HOM05D004353 ORTHO05D004989 2.1e-40 169.5 132 73.5
Oeu043896.1 Olea europaea HOM05D004353 ORTHO05D004989 5.4e-36 154.8 157 53.5
MSTRG.16235 Avicennia marina HOM05D004353 ORTHO05D004989 1.6e-35 153.3 157 63.7
PGR031G1729 Punica granatum HOM05D004353 ORTHO05D004989 2.7e-35 152.5 156 62.8
Cc04_g05110 Coffea canephora HOM05D004353 ORTHO05D004989 1.0e-34 150.6 158 62.7
Ciclev10021938m.g Citrus clementina HOM05D004353 ORTHO05D004989 5.0e-34 148.3 157 51.6
SalBow8G1390 Salvia bowleyana HOM05D004353 ORTHO05D004989 5.0e-34 148.3 155 63.9
Migut.M00919 Erythranthe guttata HOM05D004353 ORTHO05D004989 4.3e-33 145.2 155 60.0
Thecc.09G282100 Theobroma cacao HOM05D004353 ORTHO05D004989 4.3e-33 145.2 157 56.1
MD15G1424100 Malus domestica HOM05D004353 ORTHO05D004989 5.6e-33 144.8 159 59.7
Gohir.A13G222400 Gossypium hirsutum HOM05D004353 ORTHO05D004989 1.2e-32 143.7 165 49.7
Gorai.013G257700 Gossypium raimondii HOM05D004353 ORTHO05D004989 1.6e-32 143.3 165 50.9
MD08G1231200 Malus domestica HOM05D004353 ORTHO05D004989 2.8e-32 142.5 161 55.9
Sc05g0005560 Simmondsia chinensis HOM05D004353 ORTHO05D004989 3.6e-32 142.1 152 60.5
TWI63G0567 Tripterygium wilfordii HOM05D004353 ORTHO05D004989 3.6e-32 142.1 152 49.3
Gohir.D10G228800 Gossypium hirsutum HOM05D004353 ORTHO05D004989 6.1e-32 141.4 165 50.9
Gorai.011G261300 Gossypium raimondii HOM05D004353 ORTHO05D004989 6.1e-32 141.4 165 50.9
Hma1.2p1_0017F.1_g011670 Hydrangea macrophylla HOM05D004353 ORTHO05D004989 8.0e-32 141.0 149 61.1
Potri.006G123800 Populus trichocarpa HOM05D004353 ORTHO05D004989 1.4e-31 140.2 152 53.3
FAN12G3936 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.8e-31 139.8 168 55.4
FAN12G4128 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.8e-31 139.8 168 55.4
Eucgr.A01325 Eucalyptus grandis HOM05D004353 ORTHO05D004989 5.2e-31 138.3 161 54.7
FAN07G2673 Fragaria x ananassa HOM05D004353 ORTHO05D004989 5.2e-31 138.3 168 54.8
FAN17G1422 Fragaria x ananassa HOM05D004353 ORTHO05D004989 5.2e-31 138.3 168 54.8
AUR62025025 Chenopodium quinoa HOM05D004353 ORTHO05D004989 6.8e-31 137.9 151 58.9
FvH4_4g10550 Fragaria vesca HOM05D004353 ORTHO05D004989 6.8e-31 137.9 168 54.8
Cpa.g.sc9.354 Carica papaya HOM05D004353 ORTHO05D004989 1.2e-30 137.1 160 54.4
CANSAT54G2783 Cannabis sativa HOM05D004353 ORTHO05D004989 2.0e-30 136.3 156 60.3
AUR62006505 Chenopodium quinoa HOM05D004353 ORTHO05D004989 3.4e-30 135.6 148 50.0
FAN22G0682 Fragaria x ananassa HOM05D004353 ORTHO05D004989 3.4e-30 135.6 166 51.8
Prupe.1G205800 Prunus persica HOM05D004353 ORTHO05D004989 4.4e-30 135.2 163 57.7
GSVIVG01038129001 Vitis vinifera HOM05D004353 ORTHO05D004989 4.4e-30 135.2 156 58.3
QL10p053348 Quercus lobata HOM05D004353 ORTHO05D004989 7.5e-30 134.4 153 56.2
QL10p054510 Quercus lobata HOM05D004353 ORTHO05D004989 7.5e-30 134.4 153 56.2
Duzib168G0981 Durio zibethinus HOM05D004353 ORTHO05D004989 9.8e-30 134.0 153 46.4
Manes.11G130500 Manihot esculenta HOM05D004353 ORTHO05D004989 1.3e-29 133.7 150 49.3
Sabra06G0098000 Salix brachista HOM05D004353 ORTHO05D004989 1.3e-29 133.7 150 52.0
Prupe.1G570000 Prunus persica HOM05D004353 ORTHO05D004989 1.7e-29 133.3 165 57.0
MSTRG.19791 Avicennia marina HOM05D004353 ORTHO05D004989 2.9e-29 132.5 109 60.6
Gorai.012G140500 Gossypium raimondii HOM05D004353 ORTHO05D004989 2.9e-29 132.5 147 53.1
CiPaw.02G101000 Carya illinoinensis HOM05D004353 ORTHO05D004989 3.7e-29 132.1 155 54.8
Atru.chr6.1925 Acer truncatum HOM05D004353 ORTHO05D004989 6.4e-29 131.3 150 49.3
Ah.03g147060 Amaranthus hybridus HOM05D004353 ORTHO05D004989 1.1e-28 130.6 159 57.9
RcHm_v2.0_Chr4g0406201 Rosa chinensis HOM05D004353 ORTHO05D004989 1.4e-28 130.2 157 51.0
Gohir.D13G227200 Gossypium hirsutum HOM05D004353 ORTHO05D004989 1.8e-28 129.8 147 53.1
PSO017G5600 Papaver somniferum HOM05D004353 ORTHO05D004989 4.1e-28 128.6 160 52.5
TAR633G2112 Trochodendron aralioides HOM05D004353 ORTHO05D004989 1.2e-27 127.1 159 55.3
ClCG03G006580 Citrullus lanatus HOM05D004353 ORTHO05D004989 1.6e-27 126.7 146 61.0
PSO675G4101 Papaver somniferum HOM05D004353 ORTHO05D004989 4.6e-27 125.2 160 52.5
unitig_61.g26169 Utricularia gibba HOM05D004353 ORTHO05D004989 4.6e-27 125.2 151 51.0
COL.COLO4_19851 Corchorus olitorius HOM05D004353 ORTHO05D004989 1.0e-26 124.0 152 56.6
TAR362G0930 Trochodendron aralioides HOM05D004353 ORTHO05D004989 5.0e-26 121.7 158 53.2
EL10Ac6g15412 Beta vulgaris HOM05D004353 ORTHO05D004989 1.1e-25 120.6 162 54.3
Cfa015265 Carpinus fangiana HOM05D004353 ORTHO05D004989 1.1e-25 120.6 152 41.4
Hund04296 Selenicereus undatus HOM05D004353 ORTHO05D004989 1.1e-25 120.6 152 48.0
Aa31LG1G25350 Aethionema arabicum HOM05D004353 ORTHO05D004989 2.5e-25 119.4 159 45.3
AL4G42450 Arabidopsis lyrata HOM05D004353 ORTHO05D004989 4.3e-25 118.6 158 44.9
AT2G43630 Arabidopsis thaliana HOM05D004353 ORTHO05D004989 4.3e-25 118.6 159 46.5
CARHR138810 Cardamine hirsuta HOM05D004353 ORTHO05D004989 9.5e-25 117.5 157 45.2
Carub.0004s2616 Capsella rubella HOM05D004353 ORTHO05D004989 1.2e-24 117.1 162 45.7
Sp4g25730 Schrenkiella parvula HOM05D004353 ORTHO05D004989 3.6e-24 115.5 160 50.0
TWI15G0091 Tripterygium wilfordii HOM05D004353 ORTHO05D004989 4.7e-24 115.2 142 48.6
CsaV3_1G036770 Cucumis sativus L. HOM05D004353 ORTHO05D004989 1.0e-23 114.0 148 52.0
Thhalv10001554m.g Eutrema salsugineum HOM05D004353 ORTHO05D004989 1.4e-23 113.6 157 44.6
THA.LOC104802322 Tarenaya hassleriana HOM05D004353 ORTHO05D004989 1.4e-23 113.6 106 53.8
Atru.chr4.1388 Acer truncatum HOM05D004353 ORTHO05D004989 2.3e-23 112.8 159 48.4
Duzib150G0228 Durio zibethinus HOM05D004353 ORTHO05D004989 2.3e-23 112.8 155 47.1
Atru.chr6.1923 Acer truncatum HOM05D004353 ORTHO05D004989 8.9e-23 110.9 100 54.0
BraA04t18750Z Brassica rapa HOM05D004353 ORTHO05D004989 1.2e-22 110.5 149 44.3
DCAR_005473 Daucus carota HOM05D004353 ORTHO05D004989 2.0e-22 109.8 149 51.7
Sp5g03540 Schrenkiella parvula HOM05D004353 ORTHO05D004989 2.6e-22 109.4 152 50.0
BcaB06g29332 Brassica carinata HOM05D004353 ORTHO05D004989 3.4e-22 109.0 150 48.0
BcaC07g40471 Brassica carinata HOM05D004353 ORTHO05D004989 5.8e-22 108.2 154 48.1
A04p32910 Brassica napus HOM05D004353 ORTHO05D004989 5.8e-22 108.2 150 46.7
BcaC02g07160 Brassica carinata HOM05D004353 ORTHO05D004989 7.5e-22 107.8 150 46.7
C04p70590 Brassica napus HOM05D004353 ORTHO05D004989 9.8e-22 107.5 150 46.7
BolC4t28561H Brassica oleracea HOM05D004353 ORTHO05D004989 9.8e-22 107.5 150 46.7
Glyma.07G165200 Glycine max HOM05D004353 ORTHO05D004989 9.8e-22 107.5 152 47.4
Lj2g0015848 Lotus japonicus HOM05D004353 ORTHO05D004989 9.8e-22 107.5 160 46.9
Sed0022603 Sechium edule HOM05D004353 ORTHO05D004989 2.2e-21 106.3 146 54.8
Aqoxy3G00280 Aquilegia oxysepala HOM05D004353 ORTHO05D004989 3.7e-21 105.5 149 47.7
Glyma.09G118100 Glycine max HOM05D004353 ORTHO05D004989 3.7e-21 105.5 156 46.2
SGA_v2.0_scaffold1G00163 Striga asiatica HOM05D004353 ORTHO05D004989 3.7e-21 105.5 164 42.1
Gorai.012G140700 Gossypium raimondii HOM05D004353 ORTHO05D004989 8.3e-21 104.4 102 49.0
THA.LOC104803988 Tarenaya hassleriana HOM05D004353 ORTHO05D004989 1.1e-20 104.0 159 44.0
VMungo1215G1727 Vigna mungo HOM05D004353 ORTHO05D004989 2.4e-20 102.8 168 44.0
MELO3C002758.2 Cucumis melo HOM05D004353 ORTHO05D004989 4.1e-20 102.1 154 50.0
MBI08_g25559_MAGBIO Magnolia biondii HOM05D004353 ORTHO05D004989 4.1e-20 102.1 154 51.3
HanXRQChr10g0307981 Helianthus annuus HOM05D004353 ORTHO05D004989 1.2e-19 100.5 168 42.3
Sed0011106 Sechium edule HOM05D004353 ORTHO05D004989 3.5e-19 99.0 95 50.5
RcHm_v2.0_Chr2g0115921 Rosa chinensis HOM05D004353 ORTHO05D004989 3.0e-18 95.9 132 54.5
BcaC07g40494 Brassica carinata HOM05D004353 ORTHO05D004989 5.0e-18 95.1 151 47.7
C08p34630 Brassica napus HOM05D004353 ORTHO05D004989 5.0e-18 95.1 151 47.7
BolC8t51065H Brassica oleracea HOM05D004353 ORTHO05D004989 5.0e-18 95.1 151 47.7
ECA248G0230 Erigeron canadensis HOM05D004353 ORTHO05D004989 5.0e-18 95.1 168 45.8
BraA09t40627Z Brassica rapa HOM05D004353 ORTHO05D004989 4.3e-17 92.0 155 47.1
A09p51910 Brassica napus HOM05D004353 ORTHO05D004989 7.3e-17 91.3 155 47.1
arahy.Tifrunner.gnm1.ann1.ZXP0UV Arachis hypogaea HOM05D004353 ORTHO05D004989 9.5e-17 90.9 148 39.2
Lsat_1_v5_gn_5_149741 Lactuca sativa HOM05D004353 ORTHO05D004989 1.6e-16 90.1 150 44.0
Haze_01374 Corylus avellana HOM05D004353 ORTHO05D004989 2.1e-16 89.7 158 43.7
arahy.Tifrunner.gnm1.ann1.WL5XYL Arachis hypogaea HOM05D004353 ORTHO05D004989 3.6e-16 89.0 148 44.6
Phvul.003G023800 Phaseolus vulgaris HOM05D004353 ORTHO05D004989 3.6e-16 89.0 159 42.8
Gorai.013G194600 Gossypium raimondii HOM05D004353 ORTHO05D004989 3.1e-15 85.9 165 38.8
Ca_17991_v3 Cicer arietinum L. HOM05D004353 ORTHO05D004989 5.8e-14 81.6 158 39.2
Lalb_Chr10g0096191 Lupinus albus HOM05D004353 ORTHO05D004989 9.8e-14 80.9 141 48.2
Nn1g09685 Nelumbo nucifera HOM05D004353 ORTHO05D004989 9.8e-14 80.9 85 44.7
Lalb_Chr02g0158251 Lupinus albus HOM05D004353 ORTHO05D004989 1.3e-13 80.5 153 46.4
FAN19G0170 Fragaria x ananassa HOM05D004353 ORTHO05D004989 2.9e-13 79.3 137 46.0
ATR0743G161 Amborella trichopoda HOM05D004353 ORTHO05D004989 3.7e-13 79.0 148 43.2
FvH4_1g21910 Fragaria vesca HOM05D004353 ORTHO05D004989 3.7e-13 79.0 137 44.5
AT3G59640 Arabidopsis thaliana HOM05D004353 ORTHO05D004989 1.4e-12 77.0 132 47.7
AL5G41660 Arabidopsis lyrata HOM05D004353 ORTHO05D004989 3.2e-12 75.9 128 49.2
TPR.G36930 Trifolium pratense HOM05D004353 ORTHO05D004989 5.4e-12 75.1 146 42.5
CDE05G3235 Ceratophyllum demersum HOM05D004353 ORTHO05D004989 2.1e-11 73.2 95 56.8
AUR62039440 Chenopodium quinoa HOM05D004353 ORTHO05D004989 2.1e-11 73.2 63 49.2
Lalb_Chr21g0317861 Lupinus albus HOM05D004353 ORTHO05D004989 2.1e-11 73.2 126 46.8
Carub.0005s2635 Capsella rubella HOM05D004353 ORTHO05D004989 3.5e-11 72.4 126 50.8
Zm00001eb184150 Zea mays HOM05D004353 ORTHO05D004989 6.0e-11 71.6 152 40.8
Os02g0606000 Oryza sativa ssp. japonica HOM05D004353 ORTHO05D004989 1.3e-10 70.5 155 38.1
HPP92_005578 Vanilla planifolia HOM05D004353 ORTHO05D004989 1.3e-10 70.5 160 39.4
Lalb_Chr22g0353411 Lupinus albus HOM05D004353 ORTHO05D004989 1.7e-10 70.1 153 39.2
FAN26G0137 Fragaria x ananassa HOM05D004353 ORTHO05D004989 3.0e-10 69.3 129 41.9
Lj2g0004083 Lotus japonicus HOM05D004353 ORTHO05D004989 3.9e-10 68.9 113 50.4
Zm00001eb246630 Zea mays HOM05D004353 ORTHO05D004989 5.1e-10 68.6 148 35.1
C04p04620 Brassica napus HOM05D004353 ORTHO05D004989 8.6e-10 67.8 92 39.1
Dinv40298 Davidia involucrata HOM05D004353 ORTHO05D004989 1.1e-09 67.4 75 64.0
FAN28G0555 Fragaria x ananassa HOM05D004353 ORTHO05D004989 1.1e-09 67.4 128 48.4
SHI23072 Sapria himalayana HOM05D004353 ORTHO05D004989 1.9e-09 66.6 136 45.6
Ca_02292_v3 Cicer arietinum L. HOM05D004353 ORTHO05D004989 7.3e-09 64.7 103 35.9
Actinidia06605 Actinidia chinensis HOM05D004353 ORTHO05D004989 9.5e-09 64.3 66 48.5
HPP92_005597 Vanilla planifolia HOM05D004353 ORTHO05D004989 3.6e-08 62.4 160 37.5
arahy.Tifrunner.gnm1.ann1.I4T7AK Arachis hypogaea HOM05D004353 ORTHO05D004989 1.1e-07 60.8 153 41.8
arahy.Tifrunner.gnm1.ann1.35HMJH Arachis hypogaea HOM05D004353 ORTHO05D004989 1.4e-07 60.5 153 42.5
Psat1g079080 Pisum sativum HOM05D004353 ORTHO05D004989 1.4e-07 60.5 148 37.2
BolC4t22093H Brassica oleracea HOM05D004353 ORTHO05D004989 1.8e-07 60.1 92 38.0
Ca_13736_v3 Cicer arietinum L. HOM05D004353 ORTHO05D004989 1.8e-07 60.1 148 36.5
Atru.chr4.262 Acer truncatum HOM05D004353 ORTHO05D004989 3.1e-07 59.3 96 58.3
Psat6g042920 Pisum sativum HOM05D004353 ORTHO05D004989 4.0e-07 58.9 153 36.6
BcaB02g08913 Brassica carinata HOM05D004353 ORTHO05D004989 6.8e-07 58.2 74 40.5
Medtr6g012760 Medicago truncatula HOM05D004353 ORTHO05D004989 1.2e-06 57.4 128 35.2
Glyma.15G137300 Glycine max HOM05D004353 ORTHO05D004989 1.5e-06 57.0 115 51.3
Glyma.09G032300 Glycine max HOM05D004353 ORTHO05D004989 2.0e-06 56.6 120 48.3
BcaC02g12375 Brassica carinata HOM05D004353 ORTHO05D004989 2.6e-06 56.2 82 36.6
Medtr1g030860 Medicago truncatula HOM05D004353 ORTHO05D004989 2.6e-06 56.2 155 34.8
VMungo0540G0595 Vigna mungo HOM05D004353 ORTHO05D004989 3.4e-06 55.8 145 40.0
Os04g0493300 Oryza sativa ssp. japonica HOM05D004353 ORTHO05D004989 4.4e-06 55.5 96 29.2
TPR.G8801 Trifolium pratense HOM05D004353 ORTHO05D004989 7.6e-06 54.7 67 38.8
Phvul.006G120600 Phaseolus vulgaris HOM05D004353 ORTHO05D004989 9.9e-06 54.3 116 41.4


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