Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400005078 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.4e-39 166.4 124 100.0
Sopen03g005540 Solanum pennellii HOM05D037882 ORTHO05D002434 1.1e-33 146.7 125 72.0
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 5.2e-10 68.2 68 51.5
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.9e-08 61.6 73 49.3
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.9e-08 61.6 73 49.3
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 8.3e-08 60.8 78 44.9
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 1.4e-07 60.1 125 32.8
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.8e-07 59.7 73 47.9
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 1.8e-07 59.7 73 47.9
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 3.1e-07 58.9 72 48.6
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 3.1e-07 58.9 73 46.6
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 3.1e-07 58.9 73 46.6
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 4.1e-07 58.5 127 31.5
Nitab4.5_0009398g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 7.0e-07 57.8 72 48.6
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 7.0e-07 57.8 73 47.9
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 9.2e-07 57.4 66 42.4
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 1.2e-06 57.0 73 41.1
Gorai.009G178200 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.0e-06 56.2 72 45.8
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 2.0e-06 56.2 65 50.8
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 2.0e-06 56.2 73 43.8
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 2.7e-06 55.8 73 42.5
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 2.7e-06 55.8 72 41.7
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 2.7e-06 55.8 65 50.8
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 4.5e-06 55.1 73 45.2
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 4.5e-06 55.1 73 41.1
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 5.9e-06 54.7 64 48.4
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 5.9e-06 54.7 65 49.2
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 5.9e-06 54.7 65 49.2
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 5.9e-06 54.7 124 30.6
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 5.9e-06 54.7 73 46.6
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 7.7e-06 54.3 73 43.8
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 7.7e-06 54.3 66 51.5


User provided reference genes

Program Settings