Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 0.0e+00 1309.7 689 100.0
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 0.0e+00 1089.3 690 85.2
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 7.9e-310 1066.6 690 83.6
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.3e-247 858.2 705 69.8
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 6.6e-232 807.7 707 66.5
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 7.4e-231 804.3 728 65.4
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 4.3e-106 389.8 749 39.9
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 2.2e-86 324.3 669 39.0
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 7.2e-85 319.3 750 37.5
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.7e-81 307.0 568 41.4
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 2.2e-78 297.7 756 36.0
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 8.8e-75 285.8 737 35.7
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 2.2e-73 281.2 728 34.5
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 7.7e-71 272.7 739 34.1
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 3.8e-70 270.4 732 33.5
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 3.6e-68 263.8 714 34.7
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 5.2e-67 260.0 715 35.0
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 6.7e-67 259.6 696 35.8
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.2e-66 258.8 655 35.0
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 3.1e-64 250.8 752 33.1
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 4.1e-64 250.4 705 33.9
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.6e-63 248.4 632 33.9
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 7.2e-61 239.6 662 34.1
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 1.6e-60 238.4 626 34.2
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.0e-59 235.7 643 33.6
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.4e-59 235.3 698 32.5
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 2.6e-58 231.1 692 32.1
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 3.4e-58 230.7 733 31.7
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 5.7e-58 229.9 626 33.2
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 5.7e-58 229.9 624 34.6
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.3e-57 228.8 610 35.1
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 6.3e-57 226.5 557 36.6
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 8.3e-57 226.1 718 32.6
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.8e-56 224.9 614 34.7
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.4e-56 224.6 710 32.4
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 9.1e-56 222.6 648 32.7
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 9.1e-56 222.6 633 33.0
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.2e-55 222.2 702 31.3
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 2.0e-55 221.5 763 30.4
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 1.7e-54 218.4 645 32.2
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 5.0e-54 216.9 718 31.2
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.5e-54 216.5 691 31.7
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.6e-54 216.1 646 32.7
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 1.1e-53 215.7 742 31.1
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-53 215.7 641 33.1
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.5e-53 215.3 585 34.2
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.6e-52 211.8 584 34.6
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 2.1e-52 211.5 679 30.9
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 2.1e-52 211.5 695 32.8
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 5.2e-51 206.8 746 30.0
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.2e-51 206.8 691 31.1
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.2e-51 206.8 646 32.4
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 5.2e-51 206.8 723 30.7
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.0e-50 204.9 728 31.6
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.6e-50 204.5 670 30.9
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 2.6e-50 204.5 723 30.3
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 2.6e-50 204.5 594 33.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 7.5e-50 203.0 726 30.9
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 7.5e-50 203.0 726 30.9
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.8e-49 201.1 621 34.3
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.7e-49 200.7 649 31.3
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.1e-48 199.1 698 31.4
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 1.8e-48 198.4 717 29.3
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 3.1e-48 197.6 739 30.0
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 3.1e-48 197.6 742 29.2
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.1e-48 197.2 552 32.2
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 5.4e-48 196.8 703 32.3
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 5.4e-48 196.8 618 32.5
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 9.2e-48 196.1 712 31.0
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 2.0e-47 194.9 625 31.8
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 5.9e-47 193.4 687 31.3
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.3e-46 192.2 649 31.7
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 6.6e-46 189.9 742 29.0
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.8e-44 184.5 723 29.2
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 4.7e-44 183.7 706 29.6
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 6.1e-44 183.3 668 31.4
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.4e-43 182.2 693 29.9
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.2e-42 179.1 630 31.6
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 1.2e-42 179.1 615 30.6
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.2e-42 179.1 669 28.3
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 1.5e-42 178.7 652 31.6
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 2.6e-42 177.9 610 30.8
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.4e-42 177.2 436 35.3
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 7.5e-42 176.4 653 30.6
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 7.5e-42 176.4 644 29.2
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 9.8e-42 176.0 623 31.3
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 9.8e-42 176.0 584 32.2
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.7e-41 175.3 682 28.9
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.4e-40 172.2 437 35.0
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.4e-40 172.2 432 35.2
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 3.2e-40 171.0 591 30.3
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 4.1e-40 170.6 598 31.8
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 9.2e-40 169.5 595 31.1
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 9.2e-40 169.5 709 29.1
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 1.2e-39 169.1 629 31.0
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 3.5e-39 167.5 595 31.6
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 6.0e-39 166.8 474 32.7
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 6.0e-39 166.8 708 30.8
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 1.3e-38 165.6 595 30.9
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 5.0e-38 163.7 620 31.3
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 1.6e-36 158.7 603 30.8
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.6e-36 158.7 602 30.9
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 2.8e-36 157.9 537 33.5
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.3e-35 154.8 573 31.6
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 4.4e-34 150.6 640 28.1
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.7e-33 148.7 633 29.7
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 2.2e-33 148.3 591 29.3
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 8.3e-33 146.4 686 28.6
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.9e-29 135.2 403 31.3
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 3.1e-27 127.9 300 34.7
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 4.0e-27 127.5 422 29.1
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 4.0e-27 127.5 397 31.0
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 4.9e-17 94.0 270 32.6
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 9.2e-16 89.7 265 30.6
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 8.7e-14 83.2 493 22.9
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 3.6e-12 77.8 426 25.8
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 8.1e-12 76.6 153 36.6
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 3.1e-11 74.7 327 26.0
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.1e-11 74.7 241 32.0
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 1.3e-06 59.3 260 20.8
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 8.7e-06 56.6 195 34.9


User provided reference genes

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