Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 8.6e-149 530.4 288 100.0
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 1.2e-142 510.0 288 89.2
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 1.3e-141 506.5 288 88.9
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 7.8e-118 427.6 288 79.2
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 2.3e-117 426.0 290 75.2
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 3.6e-107 392.1 279 77.1
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 6.9e-106 387.9 285 70.5
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 2.1e-83 313.2 285 59.3
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 5.0e-80 302.0 293 58.0
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 8.5e-80 301.2 290 59.0
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 2.5e-79 299.7 286 60.5
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.3e-77 293.9 284 62.0
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 3.9e-77 292.4 283 55.8
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 3.9e-77 292.4 282 56.4
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 5.1e-77 292.0 286 56.3
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 5.1e-77 292.0 283 56.2
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 5.1e-77 292.0 282 57.4
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.1e-76 290.8 286 55.6
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 3.3e-76 289.3 291 56.4
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 4.3e-76 288.9 283 55.5
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 9.7e-76 287.7 285 56.1
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 9.7e-76 287.7 194 71.6
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 2.2e-75 286.6 287 55.4
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 2.2e-75 286.6 283 54.4
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 3.7e-75 285.8 284 60.2
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 4.8e-75 285.4 286 55.6
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 1.8e-74 283.5 291 56.4
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 3.1e-74 282.7 313 53.0
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 5.3e-74 282.0 286 61.2
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 6.9e-74 281.6 286 54.9
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.2e-73 280.8 291 54.3
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 1.2e-73 280.8 288 59.4
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 1.5e-73 280.4 190 72.1
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 2.0e-73 280.0 277 55.6
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 4.5e-73 278.9 282 53.9
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.0e-72 277.7 179 77.7
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.7e-72 276.9 285 54.4
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 2.9e-72 276.2 282 55.0
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.9e-72 276.2 283 59.0
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 8.5e-72 274.6 282 56.7
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.5e-71 273.1 190 68.9
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 4.2e-71 272.3 278 55.0
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 5.5e-71 271.9 284 54.2
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.2e-70 270.8 283 52.3
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.2e-70 270.8 280 54.6
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 2.1e-70 270.0 190 68.4
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 6.1e-70 268.5 189 67.7
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 1.0e-69 267.7 273 53.5
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.4e-69 267.3 194 66.0
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.3e-69 266.5 190 68.4
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 3.0e-69 266.2 190 67.4
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 6.7e-69 265.0 190 66.8
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 6.7e-69 265.0 291 54.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 2.0e-68 263.5 187 67.4
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 3.3e-68 262.7 282 53.9
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 4.4e-68 262.3 190 65.3
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 4.4e-68 262.3 289 50.2
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 5.7e-68 261.9 190 67.9
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 5.7e-68 261.9 274 54.0
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 6.3e-67 258.5 287 54.7
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 8.2e-67 258.1 187 65.2
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.8e-66 256.9 194 64.9
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 9.1e-66 254.6 194 64.9
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 9.1e-66 254.6 286 51.4
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 1.2e-65 254.2 281 50.9
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 2.6e-65 253.1 190 64.7
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 2.6e-65 253.1 232 56.5
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 5.9e-65 251.9 284 57.7
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.7e-64 250.4 187 64.7
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 2.2e-64 250.0 189 64.0
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 3.8e-64 249.2 208 59.1
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 6.5e-64 248.4 194 63.4
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 6.5e-64 248.4 181 66.3
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 8.5e-64 248.1 286 53.8
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 1.4e-63 247.3 285 50.9
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 1.2e-62 244.2 181 63.5
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 4.7e-62 242.3 289 48.8
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 7.9e-62 241.5 286 47.9
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 1.4e-61 240.7 188 65.4
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 1.8e-61 240.4 185 63.8
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 6.7e-61 238.4 210 58.1
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 3.3e-60 236.1 272 50.0
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 9.7e-60 234.6 264 51.1
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.3e-59 234.2 203 57.6
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 3.7e-59 232.6 280 52.9
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 4.8e-59 232.3 329 43.2
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 4.8e-59 232.3 194 57.2
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.8e-58 230.3 282 51.4
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 3.5e-57 226.1 273 47.3
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 3.5e-57 226.1 188 59.0
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.9e-55 220.3 196 56.6
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 8.0e-54 214.9 138 73.2
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.2e-52 211.1 215 60.5
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 4.4e-52 209.1 173 56.6
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 1.0e-45 188.0 183 49.7
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 5.7e-44 182.2 170 54.1
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 2.4e-42 176.8 181 48.1
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-41 173.3 182 50.0
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 3.5e-41 172.9 157 55.4
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 3.5e-41 172.9 220 47.7
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.6e-38 164.1 116 69.0
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 3.6e-38 162.9 183 43.2
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 1.2e-33 147.9 151 51.0
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.2e-28 131.3 80 77.5
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.3e-27 127.9 116 57.8
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 1.1e-26 124.8 91 62.6
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.5e-23 114.4 150 44.0
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 5.6e-23 112.5 76 68.4
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 2.0e-20 104.0 79 64.6
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 1.8e-13 80.9 95 50.5
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 3.2e-10 70.1 41 82.9


User provided reference genes

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