Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004846 Solanum tuberosum HOM05D007812 ORTHO05D009912 2.0e-21 105.1 66 100.0
Solyc06g062650.1 Solanum lycopersicum HOM05D007812 ORTHO05D009912 3.5e-13 77.8 56 85.7
CAN.G825.36 Capsicum annuum HOM05D007812 ORTHO05D009912 5.9e-13 77.0 67 77.6
Nitab4.5_0000255g0170 Nicotiana tabacum HOM05D007812 ORTHO05D009912 2.3e-09 65.1 66 65.2
Cpa.g.sc25.43 Carica papaya HOM05D007812 ORTHO05D009912 5.8e-08 60.5 65 60.0
Hma1.2p1_0496F.1_g165840 Hydrangea macrophylla HOM05D007812 ORTHO05D009912 7.5e-08 60.1 65 56.9
CiPaw.02G139600 Carya illinoinensis HOM05D007812 ORTHO05D009912 9.8e-08 59.7 61 60.7
Sabra03G0024000 Salix brachista HOM05D007812 ORTHO05D009912 9.8e-08 59.7 61 60.7
Cfa003579 Carpinus fangiana HOM05D007812 ORTHO05D009912 1.3e-07 59.3 61 57.4
PGR102G2903 Punica granatum HOM05D007812 ORTHO05D009912 4.9e-07 57.4 64 56.2
TPR.G19291 Trifolium pratense HOM05D007812 ORTHO05D009912 4.9e-07 57.4 67 59.7
BcaB06g25431 Brassica carinata HOM05D007812 ORTHO05D009912 8.3e-07 56.6 58 56.9
A05p35560 Brassica napus HOM05D007812 ORTHO05D009912 8.3e-07 56.6 58 56.9
C05p53950 Brassica napus HOM05D007812 ORTHO05D009912 8.3e-07 56.6 58 56.9
BolC5t34061H Brassica oleracea HOM05D007812 ORTHO05D009912 8.3e-07 56.6 58 56.9
BraA05t22365Z Brassica rapa HOM05D007812 ORTHO05D009912 8.3e-07 56.6 58 56.9
CSS0045617 Camellia sinensis var. sinensis HOM05D007812 ORTHO05D009912 8.3e-07 56.6 48 68.8
Thhalv10021887m.g Eutrema salsugineum HOM05D007812 ORTHO05D009912 8.3e-07 56.6 58 56.9
Manes.11G025800 Manihot esculenta HOM05D007812 ORTHO05D009912 8.3e-07 56.6 61 57.4
Atru.chr1.3756 Acer truncatum HOM05D007812 ORTHO05D009912 1.1e-06 56.2 61 55.7
Lalb_Chr04g0263241 Lupinus albus HOM05D007812 ORTHO05D009912 1.4e-06 55.8 67 58.2
MBI01_g09945_MAGBIO Magnolia biondii HOM05D007812 ORTHO05D009912 1.4e-06 55.8 62 56.5
Lj3g0001021 Lotus japonicus HOM05D007812 ORTHO05D009912 1.9e-06 55.5 67 56.7
PSO210G6368 Papaver somniferum HOM05D007812 ORTHO05D009912 1.9e-06 55.5 66 54.5
Sp3g12050 Schrenkiella parvula HOM05D007812 ORTHO05D009912 1.9e-06 55.5 58 55.2
Carub.0003s1338 Capsella rubella HOM05D007812 ORTHO05D009912 2.4e-06 55.1 66 54.5
Potri.001G196150 Populus trichocarpa HOM05D007812 ORTHO05D009912 2.4e-06 55.1 61 54.1
CARHR088620 Cardamine hirsuta HOM05D007812 ORTHO05D009912 4.1e-06 54.3 55 58.2
Medtr8g017190 Medicago truncatula HOM05D007812 ORTHO05D009912 4.1e-06 54.3 67 56.7
SalBow7G0845 Salvia bowleyana HOM05D007812 ORTHO05D009912 4.1e-06 54.3 67 58.2
Aa31LG10G880 Aethionema arabicum HOM05D007812 ORTHO05D009912 5.4e-06 53.9 56 55.4
ECA247G3511 Erigeron canadensis HOM05D007812 ORTHO05D009912 7.0e-06 53.5 48 66.7
Phvul.010G138300 Phaseolus vulgaris HOM05D007812 ORTHO05D009912 9.2e-06 53.1 67 59.7


User provided reference genes

Program Settings