Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004745 Solanum tuberosum HOM05D007612 ORTHO05D009468 6.4e-67 257.3 131 100.0
Sopen08g027460 Solanum pennellii HOM05D007612 ORTHO05D009468 7.1e-50 200.7 109 96.3
Solyc08g078990.3 Solanum lycopersicum HOM05D007612 ORTHO05D009468 3.5e-49 198.4 109 95.4
CAN.G1217.8 Capsicum annuum HOM05D007612 ORTHO05D009468 7.1e-42 174.1 109 81.7
Nitab4.5_0000312g0380 Nicotiana tabacum HOM05D007612 ORTHO05D009468 1.7e-40 169.5 111 82.9
Nitab4.5_0010169g0020 Nicotiana tabacum HOM05D007612 ORTHO05D009468 3.9e-40 168.3 111 82.9
Cc08_g12820 Coffea canephora HOM05D007612 ORTHO05D009468 2.8e-30 135.6 108 63.0
Lsat_1_v5_gn_6_2640 Lactuca sativa HOM05D007612 ORTHO05D009468 3.8e-27 125.2 129 58.9
Dinv21611 Davidia involucrata HOM05D007612 ORTHO05D009468 8.7e-24 114.0 109 56.9
Migut.E01671 Erythranthe guttata HOM05D007612 ORTHO05D009468 7.4e-23 110.9 116 51.7
HanXRQChr02g0049471 Helianthus annuus HOM05D007612 ORTHO05D009468 9.6e-23 110.5 116 56.0
Hma1.2p1_0753F.1_g212875 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 9.6e-23 110.5 109 53.2
unitig_26.g9270 Utricularia gibba HOM05D007612 ORTHO05D009468 1.3e-22 110.2 111 53.2
Oeu026497.1 Olea europaea HOM05D007612 ORTHO05D009468 2.1e-22 109.4 115 54.8
MSTRG.1941 Avicennia marina HOM05D007612 ORTHO05D009468 4.8e-22 108.2 113 47.8
Hma1.2p1_0753F.1_g212900 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 8.1e-22 107.5 109 52.3
SalBow1G3910 Salvia bowleyana HOM05D007612 ORTHO05D009468 6.9e-21 104.4 109 53.2
Rhsim03G0239900 Rhododendron simsii HOM05D007612 ORTHO05D009468 1.7e-19 99.8 100 53.0
Lj2C213T3 Lonicera japonica HOM05D007612 ORTHO05D009468 2.5e-18 95.9 105 56.2
DCAR_028126 Daucus carota HOM05D007612 ORTHO05D009468 6.0e-17 91.3 130 48.5
Migut.E00853 Erythranthe guttata HOM05D007612 ORTHO05D009468 6.0e-17 91.3 116 44.8
DCAR_004931 Daucus carota HOM05D007612 ORTHO05D009468 5.1e-16 88.2 123 48.0
Ah.02g116870 Amaranthus hybridus HOM05D007612 ORTHO05D009468 1.5e-15 86.7 116 50.0
EL10Ac5g13022 Beta vulgaris HOM05D007612 ORTHO05D009468 4.3e-15 85.1 123 45.5
Glyma.05G056700 Glycine max HOM05D007612 ORTHO05D009468 6.3e-14 81.3 112 47.3
FAN08G1107 Fragaria x ananassa HOM05D007612 ORTHO05D009468 8.2e-14 80.9 101 50.5
Sc01g0009390 Simmondsia chinensis HOM05D007612 ORTHO05D009468 1.1e-13 80.5 116 48.3
TAR375G1005 Trochodendron aralioides HOM05D007612 ORTHO05D009468 1.8e-13 79.7 114 41.2
CDE12G0540 Ceratophyllum demersum HOM05D001278 ORTHO05D009468 1.5e-12 76.6 96 45.8
Cfa012762 Carpinus fangiana HOM05D007612 ORTHO05D009468 2.0e-12 76.3 114 43.9
FAN13G1385 Fragaria x ananassa HOM05D007612 ORTHO05D009468 3.4e-12 75.5 112 48.2
Zm00001eb186700 Zea mays HOM05D007612 ORTHO05D009468 5.9e-12 74.7 108 41.7
ATR0763G178 Amborella trichopoda HOM05D007612 ORTHO05D009468 7.6e-12 74.3 112 46.4
Phvul.003G218300 Phaseolus vulgaris HOM05D007612 ORTHO05D009468 1.7e-11 73.2 118 42.4
SEGI_06780 Sequoiadendron giganteum HOM05D007612 ORTHO05D009468 1.7e-11 73.2 95 42.1
CiPaw.12G107900 Carya illinoinensis HOM05D007612 ORTHO05D009468 2.2e-11 72.8 114 44.7
QL12p013034 Quercus lobata HOM05D007612 ORTHO05D009468 2.2e-11 72.8 122 41.0
CANSAT21G0050 Cannabis sativa HOM05D007612 ORTHO05D009468 2.9e-11 72.4 97 42.3
HPP92_022312 Vanilla planifolia HOM05D007612 ORTHO05D009468 2.9e-11 72.4 109 42.2
Glyma.17G139100 Glycine max HOM05D007612 ORTHO05D009468 3.8e-11 72.0 106 45.3
Os02g0661800 Oryza sativa ssp. japonica HOM05D007612 ORTHO05D009468 5.0e-11 71.6 114 39.5
Lj4g0014551 Lotus japonicus HOM05D007612 ORTHO05D009468 6.5e-11 71.2 102 45.1
Psat4g070880 Pisum sativum HOM05D007612 ORTHO05D009468 1.4e-10 70.1 107 43.0
Cpa.g.sc29.136 Carica papaya HOM05D007612 ORTHO05D009468 1.9e-10 69.7 117 44.4
Oeu042243.1 Olea europaea HOM05D007612 ORTHO05D009468 1.9e-10 69.7 104 43.3
Potri.003G111700 Populus trichocarpa HOM05D007612 ORTHO05D009468 1.2e-09 67.0 108 40.7
Atru.chr9.1343 Acer truncatum HOM05D007612 ORTHO05D009468 3.0e-08 62.4 117 37.6
FvH4_5g00170 Fragaria vesca HOM05D007612 ORTHO05D009468 3.0e-08 62.4 113 39.8
FAN18G2878 Fragaria x ananassa HOM05D007612 ORTHO05D009468 3.0e-08 62.4 113 39.8
Medtr4g101420 Medicago truncatula HOM05D007612 ORTHO05D009468 3.0e-08 62.4 108 42.6
Gohir.A12G219300 Gossypium hirsutum HOM05D007612 ORTHO05D009468 3.9e-08 62.0 96 40.6
Lalb_Chr05g0225591 Lupinus albus HOM05D007612 ORTHO05D009468 6.7e-08 61.2 93 40.9
Mapoly0056s0139 Marchantia polymorpha HOM05D007612 ORTHO05D009468 6.7e-08 61.2 107 36.4
SEGI_35634 Sequoiadendron giganteum HOM05D007612 ORTHO05D009468 6.7e-08 61.2 95 38.9
TWI81G0615 Tripterygium wilfordii HOM05D007612 ORTHO05D009468 6.7e-08 61.2 97 42.3
arahy.Tifrunner.gnm1.ann1.5P7LY9 Arachis hypogaea HOM05D007612 ORTHO05D009468 1.1e-07 60.5 127 37.8
arahy.Tifrunner.gnm1.ann1.IY6VWR Arachis hypogaea HOM05D007612 ORTHO05D009468 1.9e-07 59.7 127 37.8
Gorai.008G237400 Gossypium raimondii HOM05D007612 ORTHO05D009468 3.3e-07 58.9 104 39.4
CBR_g29550 Chara braunii HOM05D007612 ORTHO05D009468 4.3e-07 58.5 96 38.5
Oeu007691.1 Olea europaea HOM05D007612 ORTHO05D009468 4.3e-07 58.5 122 34.4
Manes.01G077500 Manihot esculenta HOM05D007612 ORTHO05D009468 5.7e-07 58.2 93 41.9
AT4G22550 Arabidopsis thaliana HOM05D007612 ORTHO05D009468 7.4e-07 57.8 122 37.7
Duzib205G1442 Durio zibethinus HOM05D007612 ORTHO05D009468 7.4e-07 57.8 106 40.6
Prupe.5G073800 Prunus persica HOM05D007612 ORTHO05D009468 9.7e-07 57.4 111 36.9
MD06G1062400 Malus domestica HOM05D007612 ORTHO05D009468 1.3e-06 57.0 95 38.9
Thecc.03G255500 Theobroma cacao HOM05D007612 ORTHO05D009468 2.2e-06 56.2 96 43.8
RcHm_v2.0_Chr7g0202701 Rosa chinensis HOM05D007612 ORTHO05D009468 3.7e-06 55.5 120 34.2
SHI20264 Sapria himalayana HOM05D007612 ORTHO05D009468 3.7e-06 55.5 98 38.8
Ciclev10022424m.g Citrus clementina HOM05D007612 ORTHO05D009468 4.8e-06 55.1 95 36.8
SMO200G0174 Selaginella moellendorffii HOM05D007612 ORTHO05D009468 4.8e-06 55.1 93 32.3
Pp3c11_1660 Physcomitrium patens HOM05D007612 ORTHO05D009468 8.2e-06 54.3 95 33.7
SMO181G0010 Selaginella moellendorffii HOM05D007612 ORTHO05D009468 8.2e-06 54.3 93 32.3


User provided reference genes

Program Settings