Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 3.8e-58 228.0 121 100.0
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 5.7e-54 214.2 121 95.9
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 5.7e-54 214.2 121 95.9
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 1.9e-49 199.1 120 85.0
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 1.0e-47 193.4 118 84.7
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 1.7e-45 186.0 117 81.2
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 3.7e-45 184.9 119 79.0
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 3.1e-44 181.8 117 78.6
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 5.4e-44 181.0 115 81.7
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 2.7e-43 178.7 116 75.9
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 1.7e-42 176.0 113 83.2
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 1.7e-42 176.0 117 76.1
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 3.2e-41 171.8 117 75.2
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 7.2e-41 170.6 117 73.5
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 7.2e-41 170.6 117 76.1
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 4.7e-40 167.9 115 72.2
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 6.1e-40 167.5 114 70.2
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 1.4e-39 166.4 120 72.5
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 4.0e-39 164.9 118 69.5
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 6.8e-39 164.1 117 70.1
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 1.2e-38 163.3 115 73.9
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 1.2e-38 163.3 121 70.2
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 1.2e-38 163.3 116 71.6
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 1.5e-38 162.9 121 72.7
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 2.6e-38 162.2 124 69.4
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 5.7e-38 161.0 116 69.0
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 1.3e-37 159.8 117 71.8
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 1.7e-37 159.5 114 71.1
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 2.2e-37 159.1 118 72.9
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 2.8e-37 158.7 116 69.0
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.8e-37 158.7 121 69.4
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.8e-37 158.7 121 69.4
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.8e-37 158.7 121 69.4
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 3.7e-37 158.3 117 68.4
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 3.7e-37 158.3 112 73.2
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 4.9e-37 157.9 114 71.1
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 4.9e-37 157.9 121 69.4
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 8.3e-37 157.1 116 68.1
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 1.4e-36 156.4 121 71.1
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 1.4e-36 156.4 119 68.1
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 1.8e-36 156.0 119 68.1
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 1.8e-36 156.0 113 69.9
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.8e-36 156.0 121 68.6
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 1.8e-36 156.0 118 68.6
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 2.4e-36 155.6 113 72.6
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 5.4e-36 154.5 115 72.2
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 7.0e-36 154.1 109 72.5
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 7.0e-36 154.1 109 72.5
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 7.0e-36 154.1 109 72.5
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 7.0e-36 154.1 109 72.5
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 7.0e-36 154.1 111 73.0
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 7.0e-36 154.1 111 73.0
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 9.2e-36 153.7 116 68.1
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 9.2e-36 153.7 112 70.5
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 1.2e-35 153.3 109 72.5
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.2e-35 153.3 111 73.0
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.2e-35 153.3 114 71.1
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.2e-35 153.3 114 71.1
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 1.2e-35 153.3 114 71.1
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 1.2e-35 153.3 112 70.5
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 1.6e-35 152.9 119 68.1
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 2.7e-35 152.1 110 72.7
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 2.7e-35 152.1 110 72.7
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 2.7e-35 152.1 120 67.5
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 3.5e-35 151.8 109 72.5
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 5.9e-35 151.0 117 68.4
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 7.8e-35 150.6 117 70.9
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 1.0e-34 150.2 111 69.4
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.3e-34 149.8 117 70.1
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 1.3e-34 149.8 117 70.1
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 1.3e-34 149.8 114 70.2
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 1.7e-34 149.4 116 62.1
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 2.3e-34 149.1 119 70.6
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 1.1e-33 146.7 113 69.9
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 1.9e-33 146.0 115 69.6
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 2.1e-32 142.5 119 67.2
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 3.6e-32 141.7 116 64.7
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 3.6e-32 141.7 112 67.9
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 4.7e-32 141.4 97 73.2
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 1.4e-31 139.8 95 75.8
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.4e-31 139.8 103 69.9
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 3.0e-31 138.7 114 63.2
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 8.9e-31 137.1 96 72.9
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 2.0e-30 136.0 96 72.9
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 2.0e-30 136.0 97 72.2
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 7.5e-30 134.0 116 60.3
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 9.8e-30 133.7 97 72.2
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 9.8e-30 133.7 116 60.3
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 1.3e-29 133.3 97 72.2
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 1.7e-29 132.9 122 63.1
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 2.2e-29 132.5 95 72.6
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 2.9e-29 132.1 113 62.8
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 2.9e-29 132.1 97 71.1
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 4.9e-29 131.3 122 63.9
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 4.1e-28 128.3 96 70.8
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 4.6e-27 124.8 118 56.8
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 5.9e-27 124.4 119 55.5
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 1.7e-26 122.9 93 69.9
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 3.0e-26 122.1 115 59.1
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 3.9e-26 121.7 120 55.8
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 5.0e-26 121.3 113 60.2
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 1.5e-25 119.8 97 72.2
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 3.3e-25 118.6 97 71.1
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 4.3e-25 118.2 123 60.2
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 8.9e-23 110.5 108 57.4
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 1.5e-22 109.8 116 51.7
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 2.2e-21 105.9 111 53.2
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 1.4e-20 103.2 82 65.9
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 2.0e-19 99.4 91 54.9
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 2.0e-19 99.4 91 54.9
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 7.8e-19 97.4 117 49.6
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 1.3e-18 96.7 88 60.2
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 8.6e-18 94.0 109 47.7
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 3.3e-17 92.0 93 53.8
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 7.3e-17 90.9 116 49.1
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 1.6e-16 89.7 119 48.7
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 6.4e-13 77.8 119 38.7
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 3.2e-12 75.5 94 45.7
MELO3C006671.2 Cucumis melo HOM05D006680 ORTHO05D008206 5.6e-09 64.7 52 59.6
SEGI_26321 Sequoiadendron giganteum HOM05D047374 ORTHO05D008206 7.6e-06 54.3 112 37.5


User provided reference genes

Program Settings