Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.1e-124 448.4 206 100.0
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.7e-114 416.0 206 91.3
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 2.8e-109 398.7 207 87.9
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-108 396.7 207 86.0
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 4.8e-101 371.3 206 82.5
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 7.6e-99 364.0 206 82.5
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.9e-97 359.4 200 81.0
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 4.3e-94 348.2 189 83.1
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 8.7e-87 323.9 201 73.6
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.1e-86 323.6 201 74.6
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 4.9e-82 308.1 203 70.0
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 2.5e-81 305.8 228 64.5
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.5e-78 295.8 203 68.5
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 9.7e-78 293.9 203 68.5
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.8e-77 291.6 203 67.5
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.1e-76 288.9 148 89.9
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.9e-75 284.6 147 87.1
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.5e-74 280.8 181 68.5
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 2.5e-73 279.3 170 71.8
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 5.5e-73 278.1 147 85.7
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-71 273.5 147 83.7
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-64 250.4 148 77.0
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 6.5e-58 228.0 194 56.7
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.7e-56 222.6 147 69.4
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 3.0e-55 219.2 202 55.9
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 3.0e-55 219.2 243 49.0
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.7e-53 212.2 189 52.4
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 1.2e-48 197.2 227 47.6
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.3e-45 184.9 215 46.5
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.0e-43 179.9 219 41.6
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.2e-40 170.6 215 42.3
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 1.7e-37 160.2 144 54.2
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.7e-37 159.1 128 58.6
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 2.4e-36 156.4 214 43.0
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.0e-34 151.0 152 53.3
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 3.8e-34 149.1 135 54.1
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.7e-29 132.5 149 47.7
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 9.2e-28 127.9 150 47.3
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 3.5e-27 125.9 128 46.9
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 8.9e-23 111.3 77 59.7
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 5.8e-22 108.6 117 44.4
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.0e-16 88.2 125 40.8
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.1e-15 87.8 54 70.4
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 8.9e-15 84.7 60 63.3
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.5e-14 84.0 56 66.1
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 3.4e-14 82.8 56 64.3
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 4.4e-14 82.4 58 62.1
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 9.8e-14 81.3 54 64.8
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 1.7e-13 80.5 56 62.5
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.9e-13 79.7 82 45.1
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 1.1e-12 77.8 51 68.6
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 1.1e-12 77.8 58 58.6
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 1.4e-12 77.4 56 60.7
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 3.2e-12 76.3 54 59.3
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 5.4e-12 75.5 56 57.1
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 9.2e-12 74.7 56 58.9
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 9.2e-12 74.7 56 58.9
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 9.2e-12 74.7 56 58.9
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 2.7e-11 73.2 56 55.4
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 3.9e-10 69.3 56 55.4
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 1.1e-09 67.8 41 70.7
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 4.3e-09 65.9 56 51.8
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 7.3e-09 65.1 51 56.9
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 6.2e-08 62.0 55 52.7
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 6.2e-08 62.0 51 54.9
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 2.3e-07 60.1 55 50.9
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 2.3e-07 60.1 57 50.9
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 2.3e-07 60.1 60 46.7
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 3.1e-07 59.7 55 52.7
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 5.2e-07 58.9 60 45.0
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 6.8e-07 58.5 55 50.9
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 6.8e-07 58.5 63 47.6
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 8.9e-07 58.2 51 58.8
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 8.9e-07 58.2 53 49.1
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 8.9e-07 58.2 53 52.8
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 1.5e-06 57.4 55 47.3
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 2.0e-06 57.0 64 48.4
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 2.6e-06 56.6 60 43.3
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 3.4e-06 56.2 52 53.8
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 3.4e-06 56.2 53 54.7
arahy.Tifrunner.gnm1.ann1.UI0JR9 Arachis hypogaea HOM05D007628 ORTHO05D007342 7.5e-06 55.1 57 47.4


User provided reference genes

Program Settings