Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 1.2e-110 403.3 199 100.0
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 4.3e-105 384.8 199 96.5
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 1.0e-101 373.6 193 96.9
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 2.7e-91 339.0 197 83.8
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 4.3e-89 331.6 197 82.7
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 1.1e-76 290.4 198 74.2
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 5.4e-15 85.5 79 51.9
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 1.7e-13 80.5 79 54.4
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 2.3e-13 80.1 79 46.8
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 3.0e-13 79.7 79 46.8
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 1.9e-12 77.0 79 48.1
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 3.3e-12 76.3 81 48.1
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 4.3e-12 75.9 80 45.0
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 4.3e-12 75.9 80 45.0
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 7.3e-12 75.1 79 44.3
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 1.6e-11 73.9 79 43.0
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 1.6e-11 73.9 82 51.2
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 2.1e-11 73.6 79 46.8
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 2.8e-11 73.2 82 51.2
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 4.7e-11 72.4 79 44.3
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 4.7e-11 72.4 81 45.7
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 8.1e-11 71.6 79 44.3
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 8.1e-11 71.6 79 43.0
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.1e-10 71.2 79 43.0
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 1.4e-10 70.9 79 46.8
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 1.4e-10 70.9 79 44.3
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.4e-10 70.9 79 44.3
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 2.4e-10 70.1 79 41.8
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 2.4e-10 70.1 78 43.6
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 3.1e-10 69.7 79 46.8
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 4.0e-10 69.3 81 45.7
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 5.2e-10 68.9 100 41.0
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 6.9e-10 68.6 79 45.6
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 8.9e-10 68.2 79 48.1
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 1.2e-09 67.8 82 45.1
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 1.2e-09 67.8 78 43.6
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.5e-09 67.4 79 41.8
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 1.5e-09 67.4 79 44.3
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 7.6e-09 65.1 85 44.7
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 9.9e-09 64.7 80 46.2
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 1.3e-08 64.3 79 40.5
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.3e-08 64.3 79 44.3
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 1.3e-08 64.3 79 44.3
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 2.2e-08 63.5 79 43.0
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 2.9e-08 63.2 80 38.8
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 3.8e-08 62.8 82 40.2
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 4.9e-08 62.4 79 39.2
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 4.9e-08 62.4 79 45.6
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 4.9e-08 62.4 79 39.2
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 6.4e-08 62.0 80 46.2
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.1e-07 61.2 85 41.2
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 1.9e-07 60.5 79 38.0
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 3.2e-07 59.7 94 39.4
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 3.2e-07 59.7 79 43.0
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 4.2e-07 59.3 79 41.8
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 4.2e-07 59.3 79 41.8
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.2e-06 57.8 84 39.3
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 1.2e-06 57.8 79 39.2
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.2e-06 57.8 79 40.5
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 1.2e-06 57.8 79 38.0
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 1.2e-06 57.8 79 38.0
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.7e-06 56.6 84 39.3
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 4.6e-06 55.8 84 39.3
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 4.6e-06 55.8 79 36.7
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 6.0e-06 55.5 79 41.8
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 7.8e-06 55.1 79 39.2
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 7.8e-06 55.1 79 34.2


User provided reference genes

Program Settings