Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004320 Solanum tuberosum HOM05D000454 ORTHO05D030671 8.4e-65 250.8 185 100.0
Sopen08g020740 Solanum pennellii HOM05D000454 ORTHO05D002637 7.4e-37 157.9 156 91.0
PGSC0003DMG400004319 Solanum tuberosum HOM05D000454 ORTHO05D002637 2.8e-36 156.0 146 96.6
Sopen08g020730 Solanum pennellii HOM05D000454 ORTHO05D002637 9.1e-35 151.0 154 89.6
PGSC0003DMG400012067 Solanum tuberosum HOM05D000454 ORTHO05D002637 2.0e-34 149.8 154 90.3
Solyc08g066760.4 Solanum lycopersicum HOM05D000454 ORTHO05D002637 1.9e-32 143.3 154 86.4
PGSC0003DMG400004315 Solanum tuberosum HOM05D000454 ORTHO05D002637 9.4e-32 141.0 156 87.8
Solyc08g066770.3 Solanum lycopersicum HOM05D000454 ORTHO05D002637 7.9e-31 137.9 154 87.0
Nitab4.5_0000837g0120 Nicotiana tabacum HOM05D000454 ORTHO05D002637 1.3e-20 104.0 70 77.1
Nitab4.5_0000151g0410 Nicotiana tabacum HOM05D000454 ORTHO05D002637 2.8e-20 102.8 70 75.7
Peaxi162Scf00161g00121 Petunia axillaris HOM05D000454 ORTHO05D002637 5.9e-18 95.1 71 74.6
TWI34G0381 Tripterygium wilfordii HOM05D000454 ORTHO05D002637 3.6e-15 85.9 154 69.5
Oeu031552.2 Olea europaea HOM05D000454 ORTHO05D002637 2.0e-13 80.1 154 68.2
Oeu012195.1 Olea europaea HOM05D000454 ORTHO05D002637 4.4e-13 79.0 68 57.4
HanXRQChr11g0352041 Helianthus annuus HOM05D000454 ORTHO05D002637 7.5e-13 78.2 70 55.7
Dinv14254 Davidia involucrata HOM05D000454 ORTHO05D002637 1.3e-12 77.4 154 64.9
Thecc.09G043600 Theobroma cacao HOM05D000454 ORTHO05D002637 1.3e-12 77.4 68 60.3
TAR383G0435 Trochodendron aralioides HOM05D000454 ORTHO05D002637 1.7e-12 77.0 154 68.2
GSVIVG01035638001 Vitis vinifera HOM05D000454 ORTHO05D002637 1.7e-12 77.0 154 67.5
Atru.chr7.2112 Acer truncatum HOM05D000454 ORTHO05D002637 2.2e-12 76.6 154 66.9
DCAR_007717 Daucus carota HOM05D000454 ORTHO05D002637 3.7e-12 75.9 70 57.1
Ciclev10007796m.g Citrus clementina HOM05D000454 ORTHO05D002637 2.4e-11 73.2 153 66.0
Atru.chr7.2100 Acer truncatum HOM05D000454 ORTHO05D002637 3.1e-11 72.8 154 66.9
Atru.chr7.2114 Acer truncatum HOM05D000454 ORTHO05D002637 3.1e-11 72.8 154 66.9
Nn3g18151 Nelumbo nucifera HOM05D000454 ORTHO05D002637 1.6e-10 70.5 68 54.4
Potri.018G042200 Populus trichocarpa HOM05D000454 ORTHO05D002637 2.0e-10 70.1 154 63.0
COL.COLO4_18654 Corchorus olitorius HOM05D000454 ORTHO05D002637 2.7e-10 69.7 156 67.3
Duzib168G0801 Durio zibethinus HOM05D000454 ORTHO05D002637 2.7e-10 69.7 154 64.3
ECA248G1005 Erigeron canadensis HOM05D000454 ORTHO05D002637 2.7e-10 69.7 70 52.9
Sabra18G0042900 Salix brachista HOM05D000454 ORTHO05D002637 4.5e-10 68.9 154 63.6
Nn3g18158 Nelumbo nucifera HOM05D000454 ORTHO05D002637 7.7e-10 68.2 68 52.9
GSVIVG01035671001 Vitis vinifera HOM05D000454 ORTHO05D002637 7.7e-10 68.2 68 51.5
TAR626G1687 Trochodendron aralioides HOM05D000454 ORTHO05D002637 1.7e-09 67.0 68 52.9
TAR636G2176 Trochodendron aralioides HOM05D000454 ORTHO05D002637 1.7e-09 67.0 68 52.9
Lsat_1_v5_gn_1_47140 Lactuca sativa HOM05D000454 ORTHO05D002637 3.8e-09 65.9 70 45.7
MBI04_g02616_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 8.6e-09 64.7 69 46.4
Ciclev10007811m.g Citrus clementina HOM05D000454 ORTHO05D002637 1.1e-08 64.3 68 47.1
Cpa.g.sc7.265 Carica papaya HOM05D000454 ORTHO05D002637 1.5e-08 63.9 68 50.0
Aqoxy7G01501 Aquilegia oxysepala HOM05D000454 ORTHO05D002637 2.5e-08 63.2 153 64.7
Haze_15818 Corylus avellana HOM05D000454 ORTHO05D002637 3.2e-08 62.8 71 42.3
CiPaw.01G233200 Carya illinoinensis HOM05D000454 ORTHO05D002637 4.2e-08 62.4 68 44.1
PGSC0003DMG400039397 Solanum tuberosum HOM05D028238 ORTHO05D030671 5.5e-08 62.0 28 89.3
Atru.chr1.3491 Acer truncatum HOM05D000454 ORTHO05D002637 1.6e-07 60.5 69 43.5
CANSAT56G0237 Cannabis sativa HOM05D000454 ORTHO05D002637 2.1e-07 60.1 70 42.9
Cfa003673 Carpinus fangiana HOM05D000454 ORTHO05D002637 2.1e-07 60.1 68 42.6
MBI18_g43125_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 2.8e-07 59.7 68 47.1
FAN05G3697 Fragaria x ananassa HOM05D000454 ORTHO05D002637 3.6e-07 59.3 68 42.6
PGSC0003DMG400040341 Solanum tuberosum HOM05D028238 ORTHO05D030671 8.0e-07 58.2 60 50.0
Duzib150G0219 Durio zibethinus HOM05D000448 ORTHO05D000291 1.4e-06 57.4 65 38.5
QL05p020685 Quercus lobata HOM05D000454 ORTHO05D002637 1.4e-06 57.4 68 47.1
Lsat_1_v5_gn_4_101080 Lactuca sativa HOM05D000454 ORTHO05D002637 1.8e-06 57.0 68 41.2
Manes.16G072800 Manihot esculenta HOM05D000454 ORTHO05D002637 1.8e-06 57.0 157 58.6
SalBow4G0286 Salvia bowleyana HOM05D000454 ORTHO05D002637 1.8e-06 57.0 70 42.9
QL05p020680 Quercus lobata HOM05D000454 ORTHO05D002637 2.3e-06 56.6 68 41.2
THA.LOC104799197 Tarenaya hassleriana HOM05D000454 ORTHO05D002637 2.3e-06 56.6 69 40.6
Thecc.09G081800 Theobroma cacao HOM05D000448 ORTHO05D000291 2.3e-06 56.6 65 36.9
Sopen10g018470 Solanum pennellii HOM05D000454 ORTHO05D030671 3.0e-06 56.2 29 75.9
PSO782G3117 Papaver somniferum HOM05D000448 ORTHO05D000291 5.2e-06 55.5 69 42.0
SEGI_31740 Sequoiadendron giganteum HOM05D000454 ORTHO05D002637 5.2e-06 55.5 68 41.2
Hma1.2p1_1056F.1_g252690 Hydrangea macrophylla HOM05D000454 ORTHO05D002637 6.8e-06 55.1 69 42.0
RcHm_v2.0_Chr2g0139771 Rosa chinensis HOM05D000454 ORTHO05D002637 6.8e-06 55.1 71 40.8
QL05p020750 Quercus lobata HOM05D000454 ORTHO05D002637 8.8e-06 54.7 69 43.5


User provided reference genes

Program Settings