Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 4.5e-277 958.0 771 100.0
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 3.6e-242 842.0 771 83.5
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 6.7e-233 811.2 747 84.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 2.6e-176 623.2 740 74.5
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.1e-146 523.9 759 67.3
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.8e-135 486.5 759 65.9
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.2e-114 417.5 751 58.3
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.5e-110 402.9 751 54.3
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.5e-104 383.6 771 49.0
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.9e-103 380.6 772 55.8
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.2e-102 375.9 770 53.2
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.4e-100 371.7 772 57.1
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.0e-95 355.5 771 55.6
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 2.9e-95 354.0 768 49.6
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.5e-91 341.7 765 59.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.5e-86 325.1 736 56.8
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 2.5e-86 324.3 751 54.2
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 2.8e-85 320.9 751 56.5
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.7e-85 320.1 736 46.5
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 3.4e-83 313.9 767 49.5
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.3e-82 312.0 747 47.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.3e-82 312.0 753 54.4
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 2.2e-82 311.2 767 51.8
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 8.3e-82 309.3 772 50.5
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.4e-81 307.8 721 52.8
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 7.0e-81 306.2 728 52.6
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.0e-79 302.4 774 47.8
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.1e-78 298.9 771 50.7
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 8.0e-77 292.7 772 47.2
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 6.8e-76 289.7 750 45.3
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.2e-75 288.9 745 53.2
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 3.4e-75 287.3 772 50.1
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 3.4e-75 287.3 747 48.3
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.2e-74 284.6 770 56.1
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.9e-74 284.3 741 54.0
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 3.7e-74 283.9 776 48.7
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 6.4e-74 283.1 779 56.6
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 6.0e-72 276.6 773 52.8
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.8e-72 276.2 771 56.7
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 3.3e-70 270.8 750 52.9
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 5.6e-70 270.0 741 54.9
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 4.7e-69 266.9 742 51.2
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 6.8e-68 263.1 769 45.3
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.2e-67 262.3 765 45.8
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.3e-66 258.8 738 47.4
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 2.2e-66 258.1 764 45.2
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 2.9e-66 257.7 759 51.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 8.3e-66 256.1 764 47.1
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.9e-65 255.0 774 42.9
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 3.0e-63 247.7 726 59.8
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 8.6e-63 246.1 763 47.6
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.1e-62 245.7 724 56.5
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 3.3e-62 244.2 772 46.9
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 3.3e-62 244.2 728 42.7
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 5.6e-62 243.4 684 55.1
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 5.6e-62 243.4 726 49.7
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 4.0e-60 237.3 756 49.2
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 6.8e-60 236.5 727 48.8
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 4.4e-59 233.8 756 51.6
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 4.4e-59 233.8 786 42.9
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.7e-58 231.9 772 51.9
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 3.8e-58 230.7 756 46.3
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 4.9e-58 230.3 749 50.6
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.4e-57 228.8 765 47.6
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.4e-57 228.8 728 49.5
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 2.4e-57 228.0 727 52.8
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 4.2e-57 227.3 726 55.5
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.5e-56 224.2 480 59.8
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 4.6e-56 223.8 768 43.6
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 3.9e-55 220.7 751 45.4
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.6e-53 215.3 730 56.0
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.2e-48 199.1 773 48.0
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.6e-48 198.7 762 43.4
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.1e-48 198.4 767 46.9
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.3e-47 194.9 738 43.0
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 3.0e-47 194.5 724 50.4
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 3.9e-47 194.1 760 41.6
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 5.1e-47 193.7 777 42.6
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 6.6e-47 193.4 763 44.3
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 2.5e-46 191.4 458 44.3
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 3.3e-46 191.0 688 47.2
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 6.9e-44 183.3 485 41.0
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 6.9e-44 183.3 485 41.0
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 2.1e-40 171.8 535 44.5
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 3.3e-38 164.5 476 39.9
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.8e-37 161.4 769 43.3
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.1e-36 157.9 343 56.9
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.5e-35 155.6 777 36.0
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 3.4e-35 154.5 343 49.3
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.3e-34 152.5 710 47.9
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 6.4e-34 150.2 780 44.5
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 7.1e-33 146.7 449 40.8
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 2.7e-32 144.8 776 41.6
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.5e-30 139.0 747 42.3
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-30 138.7 352 35.5
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 2.1e-29 135.2 738 40.1
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 2.8e-29 134.8 197 46.7
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.7e-29 134.4 166 52.4
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 4.8e-29 134.0 754 42.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.4e-28 132.5 781 41.2
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.6e-21 109.0 711 42.8
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 6.3e-21 107.1 153 46.4
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 6.3e-21 107.1 130 53.8
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 3.8e-18 97.8 135 48.1
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.8e-15 89.0 339 48.4
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 6.7e-15 87.0 123 40.7
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 3.3e-14 84.7 189 34.4
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 2.8e-13 81.6 724 36.9
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.3e-12 77.4 105 50.5
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.9e-11 73.9 89 52.8
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 5.9e-11 73.9 146 36.3
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 1.5e-06 59.3 89 44.9
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 2.0e-06 58.9 162 35.8


User provided reference genes

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