Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.9e-73 278.5 143 100.0
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.4e-64 246.9 143 90.2
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-62 240.7 144 88.9
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-61 239.2 144 88.2
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-61 239.2 144 88.2
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-61 239.2 144 88.2
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-61 239.2 144 88.2
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-61 239.2 144 88.2
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 4.4e-61 238.0 144 87.5
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-60 235.7 144 86.8
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-59 231.9 145 86.2
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.1e-59 231.5 145 84.8
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 7.0e-59 230.7 143 85.3
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 7.7e-58 227.3 144 83.3
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-57 224.9 144 83.3
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-56 222.2 144 82.6
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 2.1e-55 219.2 143 81.8
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 3.0e-54 215.3 143 81.8
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-54 214.2 132 83.3
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-53 212.6 130 86.2
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 2.6e-53 212.2 141 78.0
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 4.4e-53 211.5 136 83.8
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 4.8e-52 208.0 143 78.3
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 6.5e-49 197.6 144 77.8
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 4.0e-46 188.3 109 86.2
Sopen10g007460 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-40 169.5 144 68.1
Sopen10g014100 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-39 164.9 128 74.2
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 2.0e-37 159.5 114 70.2
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 1.7e-36 156.4 98 85.7
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 2.2e-36 156.0 143 61.5
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 8.3e-36 154.1 118 67.8
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 1.4e-30 136.7 108 63.9
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-30 136.7 106 73.6
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 1.8e-30 136.3 113 62.8
PGSC0003DMG400042636 Solanum tuberosum HOM05D000017 ORTHO05D009561 4.0e-30 135.2 94 77.7
Sopen10g011870 Solanum pennellii HOM05D000017 ORTHO05D009561 1.4e-27 126.7 87 81.6
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 1.6e-26 123.2 98 65.3
Sopen07g008650 Solanum pennellii HOM05D000017 ORTHO05D009561 3.6e-23 112.1 131 53.4
CAN.G456.22 Capsicum annuum HOM05D000017 ORTHO05D009561 1.2e-21 107.1 96 60.4
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 1.4e-19 100.1 115 47.8
Sopen07g011250 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-19 99.8 69 81.2
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 4.1e-19 98.6 130 43.8
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.6e-18 96.7 119 48.7
CAN.G853.3 Capsicum annuum HOM05D004064 ORTHO05D009561 2.7e-18 95.9 79 65.8
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 4.6e-18 95.1 115 45.2
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 1.5e-16 90.1 111 45.0
CAN.G318.3 Capsicum annuum HOM05D000017 ORTHO05D009561 4.3e-16 88.6 70 62.9
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 7.3e-16 87.8 125 42.4
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-15 87.0 109 45.0
Peaxi162Scf00270g00413 Petunia axillaris HOM05D004064 ORTHO05D009561 3.6e-15 85.5 137 39.4
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 6.2e-15 84.7 113 41.6
CAN.G673.18 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-15 84.3 104 49.0
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 8.1e-15 84.3 108 43.5
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.8e-14 83.2 112 41.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-14 82.8 107 43.0
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-14 82.8 110 44.5
CAN.G125.3 Capsicum annuum HOM05D000017 ORTHO05D009561 3.1e-14 82.4 79 59.5
CAN.G147.9 Capsicum annuum HOM05D000541 ORTHO05D009561 5.2e-14 81.6 51 72.5
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 6.8e-14 81.3 118 41.5
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 6.8e-14 81.3 110 39.1
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-13 80.1 109 41.3
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.6e-13 79.3 110 38.2
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.4e-13 78.6 108 41.7
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.9e-13 77.4 110 37.3
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-12 76.3 75 45.3
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.2e-12 76.3 103 39.8
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 2.2e-12 76.3 108 39.8
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 2.9e-12 75.9 92 51.1
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 3.7e-12 75.5 108 38.0
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 3.7e-12 75.5 108 38.0
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 3.7e-12 75.5 108 38.0
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 3.7e-12 75.5 108 38.0
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 4.9e-12 75.1 82 46.3
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 6.4e-12 74.7 132 34.1
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 6.4e-12 74.7 105 37.1
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 8.3e-12 74.3 131 35.1
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 1.1e-11 73.9 105 38.1
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.1e-11 73.9 108 37.0
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 1.9e-11 73.2 123 34.1
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.4e-11 72.8 100 44.0
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-11 72.8 108 35.2
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.4e-11 72.8 106 36.8
CAN.G563.3 Capsicum annuum HOM05D000017 ORTHO05D009561 3.2e-11 72.4 84 47.6
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.2e-11 72.4 103 38.8
Sopen10g028660 Solanum pennellii HOM05D004064 ORTHO05D009561 5.4e-11 71.6 83 48.2
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 9.2e-11 70.9 131 35.9
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.2e-10 70.5 67 47.8
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 1.6e-10 70.1 90 42.2
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 2.1e-10 69.7 111 39.6
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.1e-10 69.7 93 40.9
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.7e-10 69.3 85 41.2
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.5e-10 68.9 100 41.0
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-10 68.9 108 35.2
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 7.8e-10 67.8 110 34.5
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-09 67.4 97 39.2
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-09 67.0 85 41.2
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.3e-09 67.0 97 40.2
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.3e-09 67.0 108 35.2
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-09 67.0 145 34.5
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 1.7e-09 66.6 106 36.8
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 1.7e-09 66.6 69 44.9
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 69 44.9
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 112 35.7
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-09 66.2 108 33.3
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-09 65.9 97 39.2
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 3.0e-09 65.9 65 44.6
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.9e-09 65.5 103 35.0
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 3.9e-09 65.5 138 34.8
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.1e-09 65.1 78 43.6
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 5.1e-09 65.1 105 37.1
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 6.6e-09 64.7 101 33.7
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 6.6e-09 64.7 94 38.3
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 8.6e-09 64.3 102 35.3
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-09 64.3 69 43.5
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-09 64.3 83 41.0
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-08 63.9 69 43.5
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.5e-08 63.5 69 43.5
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 1.9e-08 63.2 108 32.4
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 2.5e-08 62.8 128 35.9
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.5e-08 62.8 68 44.1
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 3.3e-08 62.4 143 33.6
Solyc08g061275.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 3.3e-08 62.4 90 41.1
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 3.3e-08 62.4 86 41.9
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-08 62.0 107 36.4
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.6e-08 61.6 100 39.0
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.6e-08 61.6 149 30.9
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 5.6e-08 61.6 107 37.4
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 7.3e-08 61.2 110 32.7
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 7.3e-08 61.2 112 33.9
Sopen11g024290 Solanum pennellii HOM05D004064 ORTHO05D009909 7.3e-08 61.2 97 41.2
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.5e-08 60.8 80 40.0
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 9.5e-08 60.8 110 33.6
PGSC0003DMG400037601 Solanum tuberosum HOM05D010431 ORTHO05D016891 9.5e-08 60.8 98 38.8
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.2e-07 60.5 89 39.3
Peaxi162Scf00780g01011 Petunia axillaris HOM05D004064 ORTHO05D009561 1.6e-07 60.1 64 50.0
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.8e-07 59.3 92 38.0
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 2.8e-07 59.3 76 42.1
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 4.7e-07 58.5 97 36.1
PGSC0003DMG400017333 Solanum tuberosum HOM05D010431 ORTHO05D016891 4.7e-07 58.5 123 37.4
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.2e-07 58.2 72 41.7
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 8.1e-07 57.8 83 37.3
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-06 57.4 108 33.3
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.4e-06 57.0 99 35.4
Peaxi162Scf00108g00115 Petunia axillaris HOM05D004064 ORTHO05D009561 1.4e-06 57.0 63 49.2
Sopen03g016300 Solanum pennellii HOM05D010431 ORTHO05D016891 1.4e-06 57.0 90 41.1
Sopen04g023140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 57.0 90 37.8
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 1.4e-06 57.0 55 45.5
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.8e-06 56.6 91 39.6
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.8e-06 56.6 117 32.5
Nitab4.5_0003885g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 2.4e-06 56.2 94 41.5
Sopen09g017060 Solanum pennellii HOM05D010431 ORTHO05D016891 2.4e-06 56.2 90 38.9
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.4e-06 56.2 99 34.3
CAN.G548.9 Capsicum annuum HOM05D004064 ORTHO05D009561 3.1e-06 55.8 52 44.2
Solyc05g041970.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 4.0e-06 55.5 74 41.9
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.2e-06 55.1 84 35.7
Nitab4.5_0000804g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.8e-06 54.7 131 32.8
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 6.8e-06 54.7 97 34.0
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 6.8e-06 54.7 55 43.6


User provided reference genes

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