Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 1.0e-111 406.8 203 100.0
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 6.1e-101 370.9 203 90.1
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 6.3e-98 360.9 203 90.1
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 5.8e-59 231.5 225 62.2
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.3e-58 230.3 225 62.2
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 1.4e-57 226.9 199 64.3
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.1e-41 174.1 107 78.5
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 9.3e-41 171.0 107 74.8
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.6e-40 170.2 108 76.9
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 4.6e-40 168.7 140 65.7
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.0e-39 167.5 113 71.7
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.3e-39 167.2 134 61.9
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 2.3e-39 166.4 125 66.4
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 3.0e-39 166.0 117 67.5
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 3.9e-39 165.6 124 66.9
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 5.1e-39 165.2 116 68.1
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 5.1e-39 165.2 119 70.6
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 6.7e-39 164.9 111 68.5
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 6.7e-39 164.9 170 55.9
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 6.7e-39 164.9 133 66.9
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 8.7e-39 164.5 129 62.8
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 1.5e-38 163.7 102 72.5
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.9e-38 163.3 113 67.3
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.5e-38 162.9 132 61.4
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 2.5e-38 162.9 99 73.7
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.5e-38 162.9 102 71.6
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 4.3e-38 162.2 114 70.2
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.3e-38 162.2 93 78.5
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 4.3e-38 162.2 107 74.8
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 4.3e-38 162.2 107 72.0
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 4.3e-38 162.2 107 70.1
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 5.6e-38 161.8 99 75.8
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 5.6e-38 161.8 117 65.8
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 7.4e-38 161.4 113 67.3
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 9.6e-38 161.0 137 61.3
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.3e-37 160.6 113 66.4
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.3e-37 160.6 185 49.2
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.3e-37 160.6 125 64.8
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 2.1e-37 159.8 98 75.5
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 2.8e-37 159.5 114 69.3
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 3.7e-37 159.1 101 74.3
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 4.8e-37 158.7 89 83.1
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 4.8e-37 158.7 108 70.4
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 4.8e-37 158.7 104 71.2
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 6.2e-37 158.3 90 81.1
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 6.2e-37 158.3 97 75.3
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.1e-36 157.5 107 69.2
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.1e-36 157.5 113 65.5
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 1.1e-36 157.5 102 72.5
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.1e-36 157.5 89 79.8
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 1.8e-36 156.8 91 80.2
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.8e-36 156.8 91 80.2
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.8e-36 156.8 91 80.2
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 2.4e-36 156.4 114 68.4
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 5.3e-36 155.2 111 67.6
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 5.3e-36 155.2 111 66.7
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 5.3e-36 155.2 92 76.1
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 6.9e-36 154.8 96 77.1
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 9.0e-36 154.5 136 58.8
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.2e-35 154.1 159 55.3
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.0e-35 153.3 120 62.5
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 2.6e-35 152.9 118 62.7
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 4.5e-35 152.1 120 62.5
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 5.8e-35 151.8 94 73.4
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 5.8e-35 151.8 94 73.4
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 1.0e-34 151.0 118 61.9
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.3e-34 150.6 136 58.1
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 2.2e-34 149.8 136 58.1
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 2.2e-34 149.8 119 65.5
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 2.9e-34 149.4 121 63.6
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 2.9e-34 149.4 91 76.9
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.8e-34 149.1 138 58.7
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 3.8e-34 149.1 113 63.7
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 6.5e-34 148.3 92 73.9
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 8.4e-34 147.9 89 76.4
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.1e-33 147.5 138 55.8
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 1.4e-33 147.1 104 68.3
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 3.2e-33 146.0 120 60.8
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 3.2e-33 146.0 89 76.4
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 4.2e-33 145.6 138 56.5
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 9.3e-33 144.4 95 66.3
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 9.3e-33 144.4 157 51.0
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.2e-32 144.1 109 61.5
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 2.1e-32 143.3 120 61.7
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.3e-31 140.6 94 70.2
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.8e-31 140.2 90 75.6
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.5e-30 137.1 89 69.7
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 1.9e-30 136.7 92 68.5
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 1.9e-30 136.7 99 62.6
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 4.3e-30 135.6 97 70.1
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 7.4e-30 134.8 75 84.0
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 9.6e-30 134.4 108 63.0
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.1e-28 131.0 103 64.1
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 1.8e-28 130.2 99 62.6
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 6.9e-28 128.3 111 54.1
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 9.0e-28 127.9 89 66.3
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 5.9e-27 125.2 104 59.6
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.1e-25 120.9 97 60.8
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 1.9e-25 120.2 96 61.5
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 2.5e-25 119.8 67 80.6
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 2.5e-25 119.8 67 80.6
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 4.2e-25 119.0 105 63.8
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.8e-23 113.6 97 58.8
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 3.9e-23 112.5 71 71.8
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 5.1e-23 112.1 93 61.3
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.5e-22 110.5 101 52.5
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 2.5e-22 109.8 89 53.9
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 2.5e-22 109.8 96 60.4
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 2.8e-21 106.3 87 55.2
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 4.1e-20 102.4 100 48.0
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 5.9e-19 98.6 98 56.1
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.5e-17 93.2 98 44.9
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.1e-12 77.8 107 37.4
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 4.5e-11 72.4 40 82.5
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 6.5e-10 68.6 52 59.6
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.0e-07 61.2 50 64.0
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 8.8e-07 58.2 31 80.6
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 8.8e-07 58.2 31 80.6
CAN.G580.10 Capsicum annuum HOM05D001023 ORTHO05D000912 2.6e-06 56.6 31 87.1


User provided reference genes

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